Cow genome map
Conread name: | rfty538b_l16.y1 |
Conread position: | 374-540 |
Cow position: | chrX:12437097-12437266 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 16, 8 |
Conread position: | 399-546 |
Cow position: | chrX:38642399-38642247 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 119 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 401-543 |
Cow position: | chrX:35273514-35273364 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 117 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 402-545 |
Cow position: | chrX:47061543-47061395 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 402-546 |
Cow position: | chrX:12082177-12082325 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 402-546 |
Cow position: | chrX:29230147-29229997 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 120 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 402-549 |
Cow position: | chrX:24749233-24749082 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 127 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 403-546 |
Cow position: | chrX:30337812-30337954 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 68, 115 |
Conread position: | 403-546 |
Cow position: | chrX:44759794-44759943 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 120 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 14, 38 |
Conread position: | 403-548 |
Cow position: | chrX:19394701-19394549 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 403-549 |
Cow position: | chrX:40557533-40557684 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 124 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 404-532 |
Cow position: | chrX:17795126-17794993 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 404-546 |
Cow position: | chrX:27306599-27306452 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 123 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 404-550 |
Cow position: | chrX:38853343-38853192 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 128 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 405-516 |
Cow position: | chrX:40046435-40046547 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 96 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 62, 16 |
Conread position: | 405-530 |
Cow position: | chrX:35387783-35387910 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 405-536 |
Cow position: | chrX:41862507-41862372 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 110 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 62, 102 |
Conread position: | 405-545 |
Cow position: | chrX:38066310-38066456 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 120 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 405-546 |
Cow position: | chrX:1466306-1466160 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 109 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 405-546 |
Cow position: | chrX:33493920-33493777 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 115 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 405-546 |
Cow position: | chrX:37780965-37781111 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 406-525 |
Cow position: | chrX:34508687-34508563 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-528 |
Cow position: | chrX:41164754-41164630 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 58, 86 |
Conread position: | 406-538 |
Cow position: | chrX:33855077-33855214 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 406-542 |
Cow position: | chrX:14275600-14275741 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-543 |
Cow position: | chrX:16836146-16836285 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 112 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 61, 86 |
Conread position: | 406-543 |
Cow position: | chrX:42469798-42469941 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 111 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 406-544 |
Cow position: | chrX:4152888-4153031 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-544 |
Cow position: | chrX:26881421-26881565 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 406-544 |
Cow position: | chrX:27668815-27668958 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 116 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-544 |
Cow position: | chrX:29050391-29050250 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 406-544 |
Cow position: | chrX:29501741-29501881 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 61, 113 |
Conread position: | 406-544 |
Cow position: | chrX:40035297-40035441 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-544 |
Cow position: | chrX:42160766-42160627 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 61, 86 |
Conread position: | 406-544 |
Cow position: | chrX:42380969-42381112 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-545 |
Cow position: | chrX:6599639-6599783 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chrX:878237-878382 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chrX:7695891-7695749 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 107 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 61, 20 |
Conread position: | 406-546 |
Cow position: | chrX:9201691-9201546 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chrX:11656224-11656079 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 116 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chrX:17726119-17725973 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 118 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 406-546 |
Cow position: | chrX:22392842-22392986 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 114 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 61, 20 |
Conread position: | 406-546 |
Cow position: | chrX:27145747-27145602 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chrX:31436617-31436472 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-546 |
Cow position: | chrX:38587700-38587845 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 406-546 |
Cow position: | chrX:40531900-40532045 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-547 |
Cow position: | chrX:6414184-6414043 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 136, 67 |
Conread position: | 406-547 |
Cow position: | chrX:31312172-31312026 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 406-547 |
Cow position: | chrX:34411989-34411843 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 117 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 406-547 |
Cow position: | chrX:43115293-43115148 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 406-548 |
Cow position: | chrX:8869258-8869407 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 406-548 |
Cow position: | chrX:41526386-41526526 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 55, 81 |
Conread position: | 406-549 |
Cow position: | chrX:16984783-16984636 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 116 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 61, 34 |
Conread position: | 407-538 |
Cow position: | chrX:36068158-36068021 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 115 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 407-543 |
Cow position: | chrX:4615869-4616010 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 60, 30 |
Conread position: | 407-544 |
Cow position: | chrX:22115175-22115317 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 407-545 |
Cow position: | chrX:21986149-21986291 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 117 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 407-545 |
Cow position: | chrX:35985960-35985819 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 115 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 9, 28 |
Conread position: | 407-546 |
Cow position: | chrX:5118356-5118504 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 407-564 |
Cow position: | chrX:2936099-2935936 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 408-539 |
Cow position: | chrX:38560700-38560564 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 115 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 408-544 |
Cow position: | chrX:25328474-25328615 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 113 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 14, 105 |
Conread position: | 408-546 |
Cow position: | chrX:13177335-13177481 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 408-546 |
Cow position: | chrX:37986366-37986229 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 78, 65 |
Conread position: | 409-542 |
Cow position: | chrX:22074940-22074797 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 116 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 409-543 |
Cow position: | chrX:12972824-12972682 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 409-544 |
Cow position: | chrX:4467107-4466967 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 409-545 |
Cow position: | chrX:42927684-42927826 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 409-546 |
Cow position: | chrX:45429882-45430024 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 409-546 |
Cow position: | chrX:46429679-46429821 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 113 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 409-549 |
Cow position: | chrX:18272918-18273060 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 7, 19 |
Conread position: | 409-551 |
Cow position: | chrX:41871207-41871060 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 409-557 |
Cow position: | chrX:34792173-34792324 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 113 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 59, 11 |
Conread position: | 410-546 |
Cow position: | chrX:40685189-40685330 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 410-549 |
Cow position: | chrX:41884273-41884417 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 412-546 |
Cow position: | chrX:20584465-20584326 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 111 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 414-546 |
Cow position: | chrX:27431783-27431920 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 113 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 415-545 |
Cow position: | chrX:2523548-2523683 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 415-546 |
Cow position: | chrX:618875-619004 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 106 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 75, 36 |
Conread position: | 415-549 |
Cow position: | chrX:6544388-6544252 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 115 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 416-544 |
Cow position: | chrX:11938801-11938935 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 45, 5 |
Conread position: | 417-540 |
Cow position: | chrX:32942944-32943072 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 102 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 421-546 |
Cow position: | chrX:19273578-19273709 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 421-548 |
Cow position: | chrX:34532648-34532516 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 112 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 426-527 |
Cow position: | chrX:7513610-7513505 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 89 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 436-548 |
Cow position: | chrX:7509252-7509139 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 90 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.