Cow genome map


           Conread name:
           rfty538b_l16.y1
        

               Conread position:
               374-540
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               16, 8
               

               Conread position:
               399-546
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               401-543
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               402-545
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               402-546
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               402-546
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               402-549
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               403-546
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               68, 115
               

               Conread position:
               403-546
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               403-548
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               403-549
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               404-532
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               404-546
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               404-550
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               405-516
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               405-530
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               405-536
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               405-545
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               405-546
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               405-546
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               405-546
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               406-525
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-528
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               58, 86
               

               Conread position:
               406-538
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               406-542
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-543
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               406-543
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 113
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               406-544
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-545
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               406-546
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-547
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               136, 67
               

               Conread position:
               406-547
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               406-547
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               406-547
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               406-548
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               406-548
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 81
               

               Conread position:
               406-549
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               407-538
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               407-543
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               407-544
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               407-545
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               407-545
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               407-546
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               407-564
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               408-539
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               408-544
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               14, 105
               

               Conread position:
               408-546
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               408-546
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 65
               

               Conread position:
               409-542
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               409-543
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               409-544
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               409-545
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               409-546
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               409-546
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               409-549
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               409-551
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               409-557
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               410-546
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               410-549
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               412-546
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               414-546
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               415-545
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               415-546
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               75, 36
               

               Conread position:
               415-549
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               416-544
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 5
               

               Conread position:
               417-540
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               421-546
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               421-548
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               426-527
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               436-548
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 0
               
Show alignments to all cow chromosomes.