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Cow genome map

           
Conread name:
           
rgul0105_p8.y1
        

               
Conread position:
               
75-436
               

               
Cow position:
               
chr3:74134857-74134480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
79-432
               

               
Cow position:
               
chr3:16656339-16656702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
79-510
               

               
Cow position:
               
chr3:210468-210022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 72
               

               
Conread position:
               
79-510
               

               
Cow position:
               
chr3:11254019-11254452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 95
               

               
Conread position:
               
79-511
               

               
Cow position:
               
chr3:59391979-59392405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 83
               

               
Conread position:
               
80-405
               

               
Cow position:
               
chr3:22845050-22844720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
191, 101
               

               
Conread position:
               
80-427
               

               
Cow position:
               
chr3:15672008-15672360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 80
               

               
Conread position:
               
80-450
               

               
Cow position:
               
chr3:81087491-81087848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
80-468
               

               
Cow position:
               
chr3:3556693-3556287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
86, 100
               

               
Conread position:
               
80-468
               

               
Cow position:
               
chr3:74088032-74088431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
202, 100
               

               
Conread position:
               
80-470
               

               
Cow position:
               
chr3:39661309-39661707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 94
               

               
Conread position:
               
80-489
               

               
Cow position:
               
chr3:36569893-36570329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
107, 8
               

               
Conread position:
               
80-491
               

               
Cow position:
               
chr3:17456122-17456550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
80-491
               

               
Cow position:
               
chr3:20674731-20675160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 42
               

               
Conread position:
               
80-494
               

               
Cow position:
               
chr3:15388367-15387927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
153, 82
               

               
Conread position:
               
80-500
               

               
Cow position:
               
chr3:15159179-15158751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
80-501
               

               
Cow position:
               
chr3:31309206-31309645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
80-509
               

               
Cow position:
               
chr3:1830428-1830864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
238, 82
               

               
Conread position:
               
80-510
               

               
Cow position:
               
chr3:2506331-2506779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
177, 78
               

               
Conread position:
               
80-510
               

               
Cow position:
               
chr3:2675177-2674729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 100
               

               
Conread position:
               
80-510
               

               
Cow position:
               
chr3:11987473-11987031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
201, 67
               

               
Conread position:
               
80-510
               

               
Cow position:
               
chr3:20130082-20129641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 63
               

               
Conread position:
               
80-510
               

               
Cow position:
               
chr3:45882044-45881609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
80-510
               

               
Cow position:
               
chr3:53270978-53270526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 100
               

               
Conread position:
               
80-510
               

               
Cow position:
               
chr3:53910254-53909814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
80-510
               

               
Cow position:
               
chr3:55970660-55970207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
80-511
               

               
Cow position:
               
chr3:31298012-31298461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
81, 103
               

               
Conread position:
               
80-512
               

               
Cow position:
               
chr3:7337639-7338083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
80-512
               

               
Cow position:
               
chr3:18855223-18854792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 91
               

               
Conread position:
               
82-484
               

               
Cow position:
               
chr3:30055306-30055720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
82-490
               

               
Cow position:
               
chr3:49482569-49482984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
82-506
               

               
Cow position:
               
chr3:7330990-7331420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
200, 45
               

               
Conread position:
               
82-510
               

               
Cow position:
               
chr3:72391231-72390783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
82, 89
               

               
Conread position:
               
84-489
               

               
Cow position:
               
chr3:78443426-78443842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
201, 68
               

               
Conread position:
               
98-428
               

               
Cow position:
               
chr3:45211431-45211078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 82
               

               
Conread position:
               
98-510
               

               
Cow position:
               
chr3:31419822-31419396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
132-510
               

               
Cow position:
               
chr3:2216447-2216060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
135-511
               

               
Cow position:
               
chr3:62998916-62999302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
185-510
               

               
Cow position:
               
chr3:49787442-49787110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
193-432
               

               
Cow position:
               
chr3:22907690-22907938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
125, 94
               

               
Conread position:
               
193-482
               

               
Cow position:
               
chr3:29596428-29596121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
92, 111
               

               
Conread position:
               
193-509
               

               
Cow position:
               
chr3:79591853-79592188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
202-409
               

               
Cow position:
               
chr3:20841844-20842058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 81
               

               
Conread position:
               
202-443
               

               
Cow position:
               
chr3:21547071-21547334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr3:23444859-23445136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 223
               

               
Conread position:
               
202-474
               

               
Cow position:
               
chr3:73460996-73460715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
87, 117
               

               
Conread position:
               
202-482
               

               
Cow position:
               
chr3:60933446-60933143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 82
               

               
Conread position:
               
202-487
               

               
Cow position:
               
chr3:73395145-73394843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
202-498
               

               
Cow position:
               
chr3:50763150-50762837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
202-498
               

               
Cow position:
               
chr3:76138500-76138200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
66, 124
               

               
Conread position:
               
202-500
               

               
Cow position:
               
chr3:5097236-5096913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 137
               

               
Conread position:
               
202-501
               

               
Cow position:
               
chr3:68145814-68146112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 185
               

               
Conread position:
               
202-504
               

               
Cow position:
               
chr3:79148256-79148570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
202-510
               

               
Cow position:
               
chr3:7566388-7566719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 204
               

               
Conread position:
               
202-510
               

               
Cow position:
               
chr3:51012524-51012833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 97
               

               
Conread position:
               
202-510
               

               
Cow position:
               
chr3:55272016-55272340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
81, 138
               

               
Conread position:
               
202-510
               

               
Cow position:
               
chr3:60597570-60597253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
202-510
               

               
Cow position:
               
chr3:73961668-73961979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
152, 203
               

               
Conread position:
               
202-510
               

               
Cow position:
               
chr3:80053513-80053834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
202-511
               

               
Cow position:
               
chr3:18459499-18459821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
202-511
               

               
Cow position:
               
chr3:80818746-80818435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
84, 247
               

               
Conread position:
               
202-512
               

               
Cow position:
               
chr3:78077214-78076887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 158
               

               
Conread position:
               
203-508
               

               
Cow position:
               
chr3:79292856-79292537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
203-510
               

               
Cow position:
               
chr3:49382977-49382652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
71, 183
               

               
Conread position:
               
205-507
               

               
Cow position:
               
chr3:63177509-63177217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
153, 88
               

               
Conread position:
               
208-510
               

               
Cow position:
               
chr3:66375343-66375023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
209-507
               

               
Cow position:
               
chr3:45524289-45523967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 216
               

               
Conread position:
               
224-501
               

               
Cow position:
               
chr3:73759509-73759810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 141
               

               
Conread position:
               
226-457
               

               
Cow position:
               
chr3:116194-115961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 193
               

               
Conread position:
               
226-510
               

               
Cow position:
               
chr3:23416883-23417165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
227-504
               

               
Cow position:
               
chr3:49793400-49793121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 153
               

               
Conread position:
               
227-510
               

               
Cow position:
               
chr3:18763894-18763594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 193
               

               
Conread position:
               
228-444
               

               
Cow position:
               
chr3:55106436-55106676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
228-463
               

               
Cow position:
               
chr3:25755027-25754784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
228-479
               

               
Cow position:
               
chr3:17450937-17451203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
228-491
               

               
Cow position:
               
chr3:17895847-17895573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
228-494
               

               
Cow position:
               
chr3:53046656-53046941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
228-510
               

               
Cow position:
               
chr3:69849504-69849802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
57, 138
               

               
Conread position:
               
229-453
               

               
Cow position:
               
chr3:60265249-60265479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 130
               

               
Conread position:
               
232-510
               

               
Cow position:
               
chr3:75480002-75479714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 137
               

               
Conread position:
               
232-510
               

               
Cow position:
               
chr3:82461164-82460883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
233-484
               

               
Cow position:
               
chr3:45897606-45897360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
233-484
               

               
Cow position:
               
chr3:45972450-45972696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
235-493
               

               
Cow position:
               
chr3:42367515-42367772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
241-482
               

               
Cow position:
               
chr3:54877975-54877732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 133
               

               
Conread position:
               
241-510
               

               
Cow position:
               
chr3:48530626-48530338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 266
               

               
Conread position:
               
266-510
               

               
Cow position:
               
chr3:31206824-31206572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
272-502
               

               
Cow position:
               
chr3:70467865-70468095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
276-507
               

               
Cow position:
               
chr3:79904976-79905209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
285-489
               

               
Cow position:
               
chr3:51506926-51506721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
287-510
               

               
Cow position:
               
chr3:14717744-14717514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 174
               

               
Conread position:
               
292-510
               

               
Cow position:
               
chr3:42423411-42423631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
292-512
               

               
Cow position:
               
chr3:81940177-81939949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
296-468
               

               
Cow position:
               
chr3:56476597-56476425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
296-510
               

               
Cow position:
               
chr3:57754558-57754780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
298-453
               

               
Cow position:
               
chr3:77006414-77006263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
298-489
               

               
Cow position:
               
chr3:49731726-49731916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr3:2025102-2024884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr3:35975192-35975406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr3:2483362-2483151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
302-480
               

               
Cow position:
               
chr3:54770921-54770734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
303-446
               

               
Cow position:
               
chr3:11711871-11711718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
303-510
               

               
Cow position:
               
chr3:7678578-7678373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
303-510
               

               
Cow position:
               
chr3:65969071-65968855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
306-512
               

               
Cow position:
               
chr3:17695090-17695308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
307-489
               

               
Cow position:
               
chr3:83369223-83369043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
308-495
               

               
Cow position:
               
chr3:12675129-12675324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
308-501
               

               
Cow position:
               
chr3:14601807-14602004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
308-501
               

               
Cow position:
               
chr3:55085272-55085475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
308-508
               

               
Cow position:
               
chr3:19708199-19708396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
308-510
               

               
Cow position:
               
chr3:49218409-49218607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
308-510
               

               
Cow position:
               
chr3:67161847-67161632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
309-486
               

               
Cow position:
               
chr3:5899725-5899550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
309-510
               

               
Cow position:
               
chr3:13899542-13899753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
309-510
               

               
Cow position:
               
chr3:35884047-35884253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
310-510
               

               
Cow position:
               
chr3:48566757-48566969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
311-510
               

               
Cow position:
               
chr3:12712016-12712223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
58, 6
               

               
Conread position:
               
314-510
               

               
Cow position:
               
chr3:58158562-58158764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
316-470
               

               
Cow position:
               
chr3:30384397-30384555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
318-512
               

               
Cow position:
               
chr3:83921099-83920896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
319-449
               

               
Cow position:
               
chr3:4861584-4861451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
319-496
               

               
Cow position:
               
chr3:28908307-28908481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
319-496
               

               
Cow position:
               
chr3:33693545-33693363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
319-500
               

               
Cow position:
               
chr3:21081479-21081677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
319-508
               

               
Cow position:
               
chr3:65058598-65058404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
320-427
               

               
Cow position:
               
chr3:75535007-75534896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
320-430
               

               
Cow position:
               
chr3:55712325-55712206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
320-437
               

               
Cow position:
               
chr3:26960696-26960821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
320-439
               

               
Cow position:
               
chr3:53836791-53836913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 25
               

               
Conread position:
               
320-451
               

               
Cow position:
               
chr3:83201630-83201768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
320-453
               

               
Cow position:
               
chr3:35074577-35074439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
320-457
               

               
Cow position:
               
chr3:55835931-55836075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
320-460
               

               
Cow position:
               
chr3:16362842-16362987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
320-460
               

               
Cow position:
               
chr3:74878695-74878838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
320-463
               

               
Cow position:
               
chr3:34937737-34937589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
320-465
               

               
Cow position:
               
chr3:41328342-41328201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
320-466
               

               
Cow position:
               
chr3:48578728-48578586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
320-469
               

               
Cow position:
               
chr3:4087270-4087424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
320-469
               

               
Cow position:
               
chr3:8604120-8604272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
320-469
               

               
Cow position:
               
chr3:71238050-71237899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
320-471
               

               
Cow position:
               
chr3:2680411-2680251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
320-475
               

               
Cow position:
               
chr3:59701903-59701748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
320-475
               

               
Cow position:
               
chr3:67543974-67544139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 51
               

               
Conread position:
               
320-476
               

               
Cow position:
               
chr3:23269992-23269837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
320-476
               

               
Cow position:
               
chr3:61143994-61143828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
320-477
               

               
Cow position:
               
chr3:55971120-55970958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
320-480
               

               
Cow position:
               
chr3:13301954-13302126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
320-483
               

               
Cow position:
               
chr3:79208102-79208276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
320-486
               

               
Cow position:
               
chr3:47284733-47284562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
320-486
               

               
Cow position:
               
chr3:73764301-73764469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
320-486
               

               
Cow position:
               
chr3:74500132-74499948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
320-488
               

               
Cow position:
               
chr3:5374228-5374057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
320-489
               

               
Cow position:
               
chr3:42588251-42588070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
320-489
               

               
Cow position:
               
chr3:82056215-82056396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
320-490
               

               
Cow position:
               
chr3:38691513-38691685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
320-490
               

               
Cow position:
               
chr3:63860997-63861181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
320-490
               

               
Cow position:
               
chr3:64281038-64281216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
320-492
               

               
Cow position:
               
chr3:77365404-77365576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
320-493
               

               
Cow position:
               
chr3:57764121-57763940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
320-493
               

               
Cow position:
               
chr3:75158253-75158082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
151, 31
               

               
Conread position:
               
320-494
               

               
Cow position:
               
chr3:30418023-30417845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
320-494
               

               
Cow position:
               
chr3:68583108-68583286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
320-495
               

               
Cow position:
               
chr3:23876889-23876713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
320-495
               

               
Cow position:
               
chr3:73708942-73708769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
320-495
               

               
Cow position:
               
chr3:75045983-75046154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
320-496
               

               
Cow position:
               
chr3:26904010-26903829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
320-496
               

               
Cow position:
               
chr3:56704650-56704823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
320-496
               

               
Cow position:
               
chr3:67704436-67704254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
320-499
               

               
Cow position:
               
chr3:28898328-28898511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
320-500
               

               
Cow position:
               
chr3:17957359-17957177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
320-500
               

               
Cow position:
               
chr3:27544439-27544619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
320-500
               

               
Cow position:
               
chr3:39171589-39171774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
320-500
               

               
Cow position:
               
chr3:58540635-58540820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
320-500
               

               
Cow position:
               
chr3:80581558-80581381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
320-501
               

               
Cow position:
               
chr3:3985221-3985039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
320-501
               

               
Cow position:
               
chr3:51609715-51609525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
320-501
               

               
Cow position:
               
chr3:65413386-65413566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
320-501
               

               
Cow position:
               
chr3:77271380-77271559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
320-502
               

               
Cow position:
               
chr3:51813594-51813787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
320-506
               

               
Cow position:
               
chr3:20257099-20256897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
320-506
               

               
Cow position:
               
chr3:52863290-52863477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
320-506
               

               
Cow position:
               
chr3:84000509-84000319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 170
               

               
Conread position:
               
320-507
               

               
Cow position:
               
chr3:70334801-70334997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
320-508
               

               
Cow position:
               
chr3:11020015-11019820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
49, 106
               

               
Conread position:
               
320-508
               

               
Cow position:
               
chr3:14465817-14466002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
320-509
               

               
Cow position:
               
chr3:22872153-22872351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
320-509
               

               
Cow position:
               
chr3:79220748-79220550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:522603-522425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:2036193-2035998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:8147774-8147963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:11026814-11026626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
145, 51
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:11640327-11640134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:14552772-14552578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:14725196-14724997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:17952550-17952356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:18067029-18066834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:18393494-18393684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:20663639-20663838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:26920803-26920595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
49, 151
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:27286126-27285925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:29891518-29891717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 117
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:30179975-30179784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
53, 176
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:31047057-31047242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:36656875-36657070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:45648026-45647835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
153, 31
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:46350564-46350352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:46901091-46900895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:48252778-48252597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:49230911-49230715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
49, 166
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:49455132-49454932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:49650280-49650080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:53113067-53112868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:53384390-53384583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:59366448-59366247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:59630608-59630800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:61678588-61678391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:61857397-61857196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:65020230-65020032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:66609949-66610138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr3:68648059-68647860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
320-511
               

               
Cow position:
               
chr3:6078436-6078635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 197
               

               
Conread position:
               
320-511
               

               
Cow position:
               
chr3:30358741-30358935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 74
               

               
Conread position:
               
320-511
               

               
Cow position:
               
chr3:49119132-49119333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
320-511
               

               
Cow position:
               
chr3:61361300-61361113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
320-511
               

               
Cow position:
               
chr3:72168823-72169022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
320-511
               

               
Cow position:
               
chr3:72675986-72675787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
320-511
               

               
Cow position:
               
chr3:77227216-77227017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
320-512
               

               
Cow position:
               
chr3:1133197-1133397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
320-512
               

               
Cow position:
               
chr3:3164601-3164798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
320-512
               

               
Cow position:
               
chr3:6689895-6689689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
320-512
               

               
Cow position:
               
chr3:23277648-23277847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
320-512
               

               
Cow position:
               
chr3:59649149-59648958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
321-506
               

               
Cow position:
               
chr3:42452407-42452214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
321-509
               

               
Cow position:
               
chr3:61539696-61539497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
321-510
               

               
Cow position:
               
chr3:61171612-61171802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
321-510
               

               
Cow position:
               
chr3:69945041-69945239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
321-512
               

               
Cow position:
               
chr3:59267983-59267780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
322-448
               

               
Cow position:
               
chr3:29334619-29334751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
322-501
               

               
Cow position:
               
chr3:49388733-49388551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
322-507
               

               
Cow position:
               
chr3:8393243-8393049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
322-509
               

               
Cow position:
               
chr3:8717144-8716948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 133
               

               
Conread position:
               
322-510
               

               
Cow position:
               
chr3:14626265-14626450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
322-510
               

               
Cow position:
               
chr3:35299558-35299374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
150, 55
               

               
Conread position:
               
322-510
               

               
Cow position:
               
chr3:45312942-45312752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
322-510
               

               
Cow position:
               
chr3:72473804-72473607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
322-510
               

               
Cow position:
               
chr3:82618280-82618091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
322-510
               

               
Cow position:
               
chr3:83490978-83490776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
322-511
               

               
Cow position:
               
chr3:24305025-24305206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
323-484
               

               
Cow position:
               
chr3:84368481-84368643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr3:39328286-39328112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
324-480
               

               
Cow position:
               
chr3:51578431-51578591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
324-489
               

               
Cow position:
               
chr3:42483791-42483621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
324-500
               

               
Cow position:
               
chr3:82359935-82359759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr3:29813134-29812951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
324-502
               

               
Cow position:
               
chr3:12670806-12670985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
327-501
               

               
Cow position:
               
chr3:5456355-5456538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
327-510
               

               
Cow position:
               
chr3:21178197-21178388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
327-510
               

               
Cow position:
               
chr3:24939338-24939525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
327-510
               

               
Cow position:
               
chr3:38870622-38870434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
327-510
               

               
Cow position:
               
chr3:55039531-55039722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
327-511
               

               
Cow position:
               
chr3:51013946-51014137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 119
               

               
Conread position:
               
327-512
               

               
Cow position:
               
chr3:17710223-17710035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
330-484
               

               
Cow position:
               
chr3:51542972-51542811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
350-505
               

               
Cow position:
               
chr3:15571519-15571362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
351-500
               

               
Cow position:
               
chr3:38497811-38497662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.