Cow genome map


           Conread name:
           rgul0107_i1.y1
        

               Conread position:
               13-394
               

               Cow position:
               chr1:33714187-33714585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               45-395
               

               Cow position:
               chr1:55329264-55328902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               46-358
               

               Cow position:
               chr1:50988192-50987874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               53-371
               

               Cow position:
               chr1:67910696-67911032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               54-373
               

               Cow position:
               chr1:71739787-71739454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               54-385
               

               Cow position:
               chr1:31813149-31813490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 13
               

               Conread position:
               54-395
               

               Cow position:
               chr1:31363957-31363603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               125-394
               

               Cow position:
               chr1:89483355-89483622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 161
               

               Conread position:
               128-385
               

               Cow position:
               chr1:64697319-64697585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 115
               
Show alignments to all cow chromosomes.