Cow genome map


           Conread name:
           rgul0107_i1.y1
        

               Conread position:
               13-384
               

               Cow position:
               chr10:51781312-51780942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               89, 54
               

               Conread position:
               19-365
               

               Cow position:
               chr10:55025720-55026068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               35-389
               

               Cow position:
               chr10:14865011-14865368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               45-385
               

               Cow position:
               chr10:41386828-41386469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               53-396
               

               Cow position:
               chr10:53320089-53319741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               54-388
               

               Cow position:
               chr10:3287950-3287608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               110-395
               

               Cow position:
               chr10:41879162-41879458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               124-388
               

               Cow position:
               chr10:32318698-32318968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               90, 226
               

               Conread position:
               124-389
               

               Cow position:
               chr10:20381712-20381436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               47, 159
               

               Conread position:
               124-395
               

               Cow position:
               chr10:22619168-22618890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               91, 218
               

               Conread position:
               133-385
               

               Cow position:
               chr10:23907773-23908036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 112
               

               Conread position:
               136-395
               

               Cow position:
               chr10:22103749-22104009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               35, 93
               
Show alignments to all cow chromosomes.