Cow genome map
| Conread name: | rgul0108_c24.y1 |
| Conread position: | 341-503 |
| Cow position: | chr11:36258835-36258989 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 341-529 |
| Cow position: | chr11:7050157-7050343 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 56 |
| Conread position: | 341-536 |
| Cow position: | chr11:11682900-11682704 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 67, 52 |
| Conread position: | 341-537 |
| Cow position: | chr11:4127490-4127302 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 172, 30 |
| Conread position: | 341-537 |
| Cow position: | chr11:63678393-63678202 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 341-538 |
| Cow position: | chr11:20423466-20423272 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 341-542 |
| Cow position: | chr11:39234759-39234562 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 341-542 |
| Cow position: | chr11:39243004-39242807 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 155, 143 |
| Conread position: | 344-511 |
| Cow position: | chr11:16283428-16283272 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 344-528 |
| Cow position: | chr11:36901342-36901522 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 150 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 344-530 |
| Cow position: | chr11:37125233-37125416 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 97, 68 |
| Conread position: | 344-542 |
| Cow position: | chr11:881506-881700 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 345-470 |
| Cow position: | chr11:32391105-32390981 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 36 |
| Conread position: | 345-533 |
| Cow position: | chr11:18167381-18167561 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 345-542 |
| Cow position: | chr11:31888448-31888248 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 345-542 |
| Cow position: | chr11:37330122-37329925 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 345-542 |
| Cow position: | chr11:37356203-37356397 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 158 |
| Conread position: | 347-482 |
| Cow position: | chr11:72347020-72347155 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-540 |
| Cow position: | chr11:5144370-5144563 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 347-542 |
| Cow position: | chr11:6604931-6604736 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 347-542 |
| Cow position: | chr11:51842318-51842506 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 179, 47 |
| Conread position: | 350-500 |
| Cow position: | chr11:9806428-9806579 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 121 |
| Conread position: | 350-500 |
| Cow position: | chr11:41483271-41483421 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 350-540 |
| Cow position: | chr11:19703347-19703157 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 354-542 |
| Cow position: | chr11:8097861-8098050 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 355-542 |
| Cow position: | chr11:37398904-37399083 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 391-542 |
| Cow position: | chr11:5187624-5187474 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 391-542 |
| Cow position: | chr11:5252402-5252553 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 414-537 |
| Cow position: | chr11:33917777-33917654 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 55 |
Show alignments to all cow chromosomes.