Cow genome map
| Conread name: | rgul0108_c24.y1 |
| Conread position: | 314-529 |
| Cow position: | chr17:20347333-20347126 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 328-537 |
| Cow position: | chr17:1325217-1325416 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 6, 38 |
| Conread position: | 341-488 |
| Cow position: | chr17:25148112-25147965 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 341-534 |
| Cow position: | chr17:11072264-11072453 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 341-542 |
| Cow position: | chr17:1491256-1491457 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 184, 37 |
| Conread position: | 341-542 |
| Cow position: | chr17:1730230-1730431 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 92 |
| Conread position: | 341-542 |
| Cow position: | chr17:1756946-1756746 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 101, 11 |
| Conread position: | 341-542 |
| Cow position: | chr17:17641882-17641677 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 133 |
| Conread position: | 341-542 |
| Cow position: | chr17:21591782-21591582 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 341-542 |
| Cow position: | chr17:24861641-24861839 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 341-543 |
| Cow position: | chr17:15483764-15483567 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 128, 134 |
| Conread position: | 344-541 |
| Cow position: | chr17:16359937-16360128 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 344-542 |
| Cow position: | chr17:4879192-4879388 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 345-537 |
| Cow position: | chr17:11051996-11052192 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 89 |
| Conread position: | 345-542 |
| Cow position: | chr17:31562356-31562157 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 347-522 |
| Cow position: | chr17:24997368-24997193 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-534 |
| Cow position: | chr17:27302350-27302165 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 347-535 |
| Cow position: | chr17:41950362-41950541 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 178, 47 |
| Conread position: | 347-542 |
| Cow position: | chr17:25546242-25546047 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 354-542 |
| Cow position: | chr17:38189912-38189729 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 356-542 |
| Cow position: | chr17:891692-891506 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 178, 94 |
| Conread position: | 359-542 |
| Cow position: | chr17:21461130-21461310 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 360-542 |
| Cow position: | chr17:10636398-10636211 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 390-533 |
| Cow position: | chr17:5347951-5347808 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 398-542 |
| Cow position: | chr17:27761230-27761373 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 6 |
| Conread position: | 399-541 |
| Cow position: | chr17:11124384-11124243 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 409-542 |
| Cow position: | chr17:6763136-6763268 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 416-542 |
| Cow position: | chr17:34054057-34054183 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 29 |
Show alignments to all cow chromosomes.