Cow genome map
| Conread name: | rgul0111_e15.y1 |
| Conread position: | 1-266 |
| Cow position: | chr1:61735669-61735390 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-268 |
| Cow position: | chr1:21954448-21954174 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 127, 83 |
| Conread position: | 1-271 |
| Cow position: | chr1:68217590-68217311 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 6, 97 |
| Conread position: | 1-277 |
| Cow position: | chr1:3429739-3429453 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 76 |
| Conread position: | 1-277 |
| Cow position: | chr1:5023970-5023706 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 5, 61 |
| Conread position: | 1-277 |
| Cow position: | chr1:57637142-57637413 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 126, 92 |
| Conread position: | 1-277 |
| Cow position: | chr1:85774229-85774513 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 1-297 |
| Cow position: | chr1:52753396-52753083 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 94, 81 |
| Conread position: | 1-331 |
| Cow position: | chr1:95176705-95177060 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-355 |
| Cow position: | chr1:37322235-37321859 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 53 |
| Conread position: | 1-355 |
| Cow position: | chr1:82936812-82936452 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 158, 83 |
| Conread position: | 2-277 |
| Cow position: | chr1:5135921-5135654 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 70, 91 |
| Conread position: | 2-277 |
| Cow position: | chr1:26729498-26729774 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 164, 75 |
| Conread position: | 2-344 |
| Cow position: | chr1:29935611-29935252 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 125 |
| Conread position: | 2-345 |
| Cow position: | chr1:39427211-39426880 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 99 |
| Conread position: | 2-345 |
| Cow position: | chr1:80899878-80900240 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 94, 333 |
| Conread position: | 2-355 |
| Cow position: | chr1:14379760-14379398 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 264 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 2-355 |
| Cow position: | chr1:52039407-52039785 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 92 |
| Conread position: | 2-355 |
| Cow position: | chr1:89510162-89509776 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 144 |
| Conread position: | 2-357 |
| Cow position: | chr1:56225246-56225623 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 2-387 |
| Cow position: | chr1:83747709-83748116 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 187 |
| Conread position: | 2-434 |
| Cow position: | chr1:78810806-78811248 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 299 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 95, 207 |
| Conread position: | 2-435 |
| Cow position: | chr1:79844239-79844690 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 91 |
| Conread position: | 2-437 |
| Cow position: | chr1:10778344-10778767 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 164, 71 |
| Conread position: | 3-163 |
| Cow position: | chr1:4573292-4573452 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 129, 123 |
| Conread position: | 3-231 |
| Cow position: | chr1:3661284-3661054 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 93 |
| Conread position: | 3-241 |
| Cow position: | chr1:77099766-77099527 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 154, 74 |
| Conread position: | 3-263 |
| Cow position: | chr1:55163694-55163961 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 93, 75 |
| Conread position: | 3-264 |
| Cow position: | chr1:20204798-20205073 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 186 |
| Conread position: | 3-264 |
| Cow position: | chr1:62919948-62920211 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 144, 42 |
| Conread position: | 3-264 |
| Cow position: | chr1:81913380-81913108 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 93, 215 |
| Conread position: | 3-276 |
| Cow position: | chr1:1956557-1956279 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 3-276 |
| Cow position: | chr1:93810213-93810484 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 113 |
| Conread position: | 3-277 |
| Cow position: | chr1:3323630-3323924 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 92, 63 |
| Conread position: | 3-277 |
| Cow position: | chr1:51968242-51968518 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 3-277 |
| Cow position: | chr1:53397759-53398031 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 93, 166 |
| Conread position: | 3-277 |
| Cow position: | chr1:74822223-74822503 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 200 |
| Conread position: | 3-277 |
| Cow position: | chr1:81613157-81613445 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-277 |
| Cow position: | chr1:89349749-89350021 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 141, 74 |
| Conread position: | 3-277 |
| Cow position: | chr1:92433791-92434056 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 3-277 |
| Cow position: | chr1:101634473-101634768 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 93, 70 |
| Conread position: | 3-345 |
| Cow position: | chr1:98551485-98551856 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 42 |
| Conread position: | 3-347 |
| Cow position: | chr1:72304599-72304252 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 154, 91 |
| Conread position: | 3-351 |
| Cow position: | chr1:42874175-42873819 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 91 |
| Conread position: | 3-353 |
| Cow position: | chr1:53458478-53458842 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 155, 74 |
| Conread position: | 3-355 |
| Cow position: | chr1:19482301-19481947 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 90 |
| Conread position: | 3-355 |
| Cow position: | chr1:22826941-22827298 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 90 |
| Conread position: | 3-355 |
| Cow position: | chr1:41056456-41056832 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 38 |
| Conread position: | 3-355 |
| Cow position: | chr1:42887491-42887128 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 90 |
| Conread position: | 3-355 |
| Cow position: | chr1:55705482-55705092 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-355 |
| Cow position: | chr1:64302462-64302097 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 105, 86 |
| Conread position: | 3-355 |
| Cow position: | chr1:73960473-73960845 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 202 |
| Conread position: | 3-382 |
| Cow position: | chr1:68253363-68253757 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 264 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 161, 73 |
| Conread position: | 3-421 |
| Cow position: | chr1:1981338-1980913 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 81 |
| Conread position: | 3-425 |
| Cow position: | chr1:61564564-61564982 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 241 |
| Conread position: | 3-425 |
| Cow position: | chr1:81569263-81568828 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 329 |
| Conread position: | 3-430 |
| Cow position: | chr1:37887015-37886581 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 302 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 93, 107 |
| Conread position: | 3-430 |
| Cow position: | chr1:81290290-81290710 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 92, 50 |
| Conread position: | 3-430 |
| Cow position: | chr1:95100735-95101157 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 286 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 125, 18 |
| Conread position: | 3-431 |
| Cow position: | chr1:44506740-44507175 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 300 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 123, 24 |
| Conread position: | 3-432 |
| Cow position: | chr1:84812165-84811733 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 298 |
| Conread position: | 3-433 |
| Cow position: | chr1:61884687-61885121 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 204 |
| Conread position: | 3-434 |
| Cow position: | chr1:71253783-71253324 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 202 |
| Conread position: | 3-435 |
| Cow position: | chr1:48105662-48105214 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 92 |
| Conread position: | 3-436 |
| Cow position: | chr1:22730533-22730945 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 168, 61 |
| Conread position: | 3-436 |
| Cow position: | chr1:84239335-84238908 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 148, 88 |
| Conread position: | 3-437 |
| Cow position: | chr1:55229756-55230186 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 124, 91 |
| Conread position: | 3-437 |
| Cow position: | chr1:85162776-85162315 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 212 |
| Conread position: | 3-437 |
| Cow position: | chr1:96136259-96136695 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 94, 49 |
| Conread position: | 3-441 |
| Cow position: | chr1:22728819-22729273 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 294 |
| Conread position: | 4-268 |
| Cow position: | chr1:51981000-51981269 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 93, 187 |
| Conread position: | 4-276 |
| Cow position: | chr1:97954676-97954413 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 4-354 |
| Cow position: | chr1:70828685-70829050 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 138, 43 |
| Conread position: | 4-355 |
| Cow position: | chr1:43389275-43388902 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 104, 71 |
| Conread position: | 4-355 |
| Cow position: | chr1:85028733-85029088 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 93, 16 |
| Conread position: | 4-382 |
| Cow position: | chr1:54732685-54732323 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 289, 71 |
| Conread position: | 4-434 |
| Cow position: | chr1:54207045-54206609 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 304 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 92, 13 |
| Conread position: | 4-436 |
| Cow position: | chr1:45555133-45555577 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 303 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 27, 227 |
| Conread position: | 4-437 |
| Cow position: | chr1:68818025-68817588 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 25 |
| Conread position: | 5-399 |
| Cow position: | chr1:47233701-47233293 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 72 |
| Conread position: | 5-437 |
| Cow position: | chr1:8396-8831 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 123, 87 |
| Conread position: | 5-437 |
| Cow position: | chr1:92197234-92197667 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 309 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 67, 54 |
| Conread position: | 6-266 |
| Cow position: | chr1:95017741-95017484 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 160, 76 |
| Conread position: | 6-277 |
| Cow position: | chr1:3720652-3720387 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 157, 71 |
| Conread position: | 6-277 |
| Cow position: | chr1:37309736-37309463 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 125, 71 |
| Conread position: | 6-355 |
| Cow position: | chr1:62964054-62964420 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 89, 63 |
| Conread position: | 6-355 |
| Cow position: | chr1:64678472-64678829 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 194 |
| Conread position: | 6-417 |
| Cow position: | chr1:82884614-82884183 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 6-433 |
| Cow position: | chr1:68854949-68855375 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 142, 69 |
| Conread position: | 9-277 |
| Cow position: | chr1:85867372-85867645 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 12-344 |
| Cow position: | chr1:3167292-3166944 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 193 |
| Conread position: | 12-430 |
| Cow position: | chr1:52913088-52912686 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 13-343 |
| Cow position: | chr1:84255536-84255902 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 13-344 |
| Cow position: | chr1:93043807-93044153 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 191 |
| Conread position: | 17-261 |
| Cow position: | chr1:19885170-19885423 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 80, 117 |
| Conread position: | 21-145 |
| Cow position: | chr1:51983377-51983497 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 21-156 |
| Cow position: | chr1:99792601-99792739 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 23-277 |
| Cow position: | chr1:100393373-100393107 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 74, 182 |
| Conread position: | 23-431 |
| Cow position: | chr1:197216-196799 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 319 |
| Conread position: | 28-277 |
| Cow position: | chr1:62036597-62036858 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 68, 124 |
| Conread position: | 29-435 |
| Cow position: | chr1:28563771-28563350 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 99, 65 |
| Conread position: | 36-275 |
| Cow position: | chr1:39510245-39510004 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 7 |
| Conread position: | 36-307 |
| Cow position: | chr1:89497770-89498042 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 38-432 |
| Cow position: | chr1:83072250-83072648 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 58, 37 |
| Conread position: | 39-210 |
| Cow position: | chr1:102113301-102113114 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 58, 179 |
| Conread position: | 39-428 |
| Cow position: | chr1:58754977-58754594 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 81, 31 |
| Conread position: | 40-437 |
| Cow position: | chr1:73546098-73545695 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 57, 156 |
| Conread position: | 47-265 |
| Cow position: | chr1:99039537-99039311 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 102, 47 |
| Conread position: | 62-323 |
| Cow position: | chr1:27380301-27380569 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 32, 125 |
| Conread position: | 67-355 |
| Cow position: | chr1:87197660-87197972 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 69-353 |
| Cow position: | chr1:86110898-86110600 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 73-378 |
| Cow position: | chr1:45553393-45553073 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 77-425 |
| Cow position: | chr1:42175566-42175929 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 132 |
| Conread position: | 77-433 |
| Cow position: | chr1:88913159-88913529 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 19, 152 |
| Conread position: | 82-433 |
| Cow position: | chr1:86682716-86682359 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 139 |
| Conread position: | 85-427 |
| Cow position: | chr1:89448750-89449101 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 65, 243 |
| Conread position: | 85-433 |
| Cow position: | chr1:23999066-23998715 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 90-355 |
| Cow position: | chr1:56618793-56618504 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 74, 118 |
| Conread position: | 94-277 |
| Cow position: | chr1:87440330-87440524 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 94-277 |
| Cow position: | chr1:89230366-89230175 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 50, 186 |
| Conread position: | 94-286 |
| Cow position: | chr1:8129105-8128903 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 129 |
| Conread position: | 94-353 |
| Cow position: | chr1:97090189-97090470 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 119 |
| Conread position: | 94-355 |
| Cow position: | chr1:91023606-91023314 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 60, 162 |
| Conread position: | 110-434 |
| Cow position: | chr1:20104146-20104476 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 228 |
| Conread position: | 113-436 |
| Cow position: | chr1:261598-261252 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 287 |
| Conread position: | 148-436 |
| Cow position: | chr1:79003903-79004188 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 127, 149 |
| Conread position: | 152-273 |
| Cow position: | chr1:41695533-41695654 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-277 |
| Cow position: | chr1:61560793-61560667 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 152-334 |
| Cow position: | chr1:65028465-65028659 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 50 |
| Conread position: | 152-425 |
| Cow position: | chr1:82513422-82513151 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 140, 162 |
| Conread position: | 152-430 |
| Cow position: | chr1:64572447-64572720 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 42 |
| Conread position: | 153-339 |
| Cow position: | chr1:67688645-67688452 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 153-421 |
| Cow position: | chr1:95072264-95072540 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 153-435 |
| Cow position: | chr1:54267999-54267727 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 26 |
| Conread position: | 155-434 |
| Cow position: | chr1:78066602-78066333 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 153, 66 |
| Conread position: | 158-274 |
| Cow position: | chr1:80904706-80904823 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 160-375 |
| Cow position: | chr1:60901015-60901238 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 162-355 |
| Cow position: | chr1:79146878-79146666 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 53 |
| Conread position: | 169-436 |
| Cow position: | chr1:816461-816185 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 106, 194 |
| Conread position: | 174-432 |
| Cow position: | chr1:102529901-102529645 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 188-437 |
| Cow position: | chr1:98911977-98912221 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 6 |
| Conread position: | 197-436 |
| Cow position: | chr1:27959574-27959335 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 68 |
Show alignments to all cow chromosomes.