Cow genome map
| Conread name: | rgul0111_e15.y1 |
| Conread position: | 1-277 |
| Cow position: | chr11:8339660-8339373 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 148, 93 |
| Conread position: | 1-277 |
| Cow position: | chr11:66733580-66733862 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 86, 116 |
| Conread position: | 1-286 |
| Cow position: | chr11:21497285-21497564 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 95, 66 |
| Conread position: | 1-297 |
| Cow position: | chr11:17496002-17495688 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 7, 55 |
| Conread position: | 1-297 |
| Cow position: | chr11:18588836-18588532 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 105, 203 |
| Conread position: | 1-297 |
| Cow position: | chr11:29916282-29916595 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 127, 89 |
| Conread position: | 1-298 |
| Cow position: | chr11:21549240-21549535 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 126, 80 |
| Conread position: | 1-330 |
| Cow position: | chr11:22499606-22499270 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 1-346 |
| Cow position: | chr11:54856379-54856721 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 1-349 |
| Cow position: | chr11:35579998-35580375 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 363 |
| Conread position: | 1-353 |
| Cow position: | chr11:27248237-27248616 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 11 |
| Conread position: | 1-355 |
| Cow position: | chr11:48544188-48544566 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 157, 18 |
| Conread position: | 1-366 |
| Cow position: | chr11:40926-41317 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 1-382 |
| Cow position: | chr11:71168834-71168452 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 73 |
| Conread position: | 1-420 |
| Cow position: | chr11:64029512-64029093 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 121, 93 |
| Conread position: | 2-198 |
| Cow position: | chr11:48484378-48484183 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 94, 121 |
| Conread position: | 2-226 |
| Cow position: | chr11:62750005-62749774 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 197 |
| Conread position: | 2-277 |
| Cow position: | chr11:30354812-30355091 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 206 |
| Conread position: | 2-277 |
| Cow position: | chr11:36981313-36981596 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 125, 91 |
| Conread position: | 2-286 |
| Cow position: | chr11:24937407-24937707 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 128 |
| Conread position: | 2-292 |
| Cow position: | chr11:61427359-61427642 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 46 |
| Conread position: | 2-355 |
| Cow position: | chr11:45646848-45646463 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 93 |
| Conread position: | 2-433 |
| Cow position: | chr11:20761590-20762039 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 76 |
| Conread position: | 2-433 |
| Cow position: | chr11:50153073-50152626 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 303 |
| Conread position: | 2-433 |
| Cow position: | chr11:59702229-59702702 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 357 |
| Conread position: | 2-434 |
| Cow position: | chr11:44222645-44223069 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 313 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 2-434 |
| Cow position: | chr11:55761624-55762044 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 95, 53 |
| Conread position: | 2-444 |
| Cow position: | chr11:1625469-1625024 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 91 |
| Conread position: | 3-162 |
| Cow position: | chr11:19508044-19508201 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 93, 66 |
| Conread position: | 3-256 |
| Cow position: | chr11:4412271-4412010 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 90, 201 |
| Conread position: | 3-275 |
| Cow position: | chr11:34120945-34121229 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 3-275 |
| Cow position: | chr11:70836621-70836345 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 3-276 |
| Cow position: | chr11:10620579-10620296 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 51 |
| Conread position: | 3-276 |
| Cow position: | chr11:16251502-16251214 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 282 |
| Conread position: | 3-276 |
| Cow position: | chr11:70619802-70620076 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 3-277 |
| Cow position: | chr11:1849419-1849138 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 206 |
| Conread position: | 3-277 |
| Cow position: | chr11:24601716-24601997 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 206 |
| Conread position: | 3-277 |
| Cow position: | chr11:30912246-30911969 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 198 |
| Conread position: | 3-277 |
| Cow position: | chr11:50778117-50778400 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 221 |
| Conread position: | 3-286 |
| Cow position: | chr11:15285871-15285573 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-338 |
| Cow position: | chr11:39115240-39115590 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 280 |
| Conread position: | 3-338 |
| Cow position: | chr11:62151135-62150787 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 163, 78 |
| Conread position: | 3-345 |
| Cow position: | chr11:39499123-39499471 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 145, 67 |
| Conread position: | 3-355 |
| Cow position: | chr11:17083551-17083185 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 3-355 |
| Cow position: | chr11:55052620-55052997 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 32, 212 |
| Conread position: | 3-355 |
| Cow position: | chr11:64334604-64334963 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 257 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 96, 70 |
| Conread position: | 3-358 |
| Cow position: | chr11:13061477-13061118 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 66 |
| Conread position: | 3-384 |
| Cow position: | chr11:44575990-44575600 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 116 |
| Conread position: | 3-421 |
| Cow position: | chr11:44234105-44234550 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 93, 16 |
| Conread position: | 3-435 |
| Cow position: | chr11:11125410-11125854 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 67 |
| Conread position: | 3-435 |
| Cow position: | chr11:40818892-40818444 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 72 |
| Conread position: | 3-437 |
| Cow position: | chr11:17321404-17321858 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 173 |
| Conread position: | 3-437 |
| Cow position: | chr11:69119046-69119511 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-438 |
| Cow position: | chr11:62225746-62226201 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 308 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 152, 62 |
| Conread position: | 3-438 |
| Cow position: | chr11:80564051-80564491 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 301 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 142, 98 |
| Conread position: | 3-448 |
| Cow position: | chr11:52381124-52380671 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 323 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 94, 74 |
| Conread position: | 4-277 |
| Cow position: | chr11:33349954-33349668 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 93, 213 |
| Conread position: | 4-277 |
| Cow position: | chr11:42358870-42359147 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 4-355 |
| Cow position: | chr11:17227892-17227521 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 161, 63 |
| Conread position: | 4-436 |
| Cow position: | chr11:11534156-11533745 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 93, 159 |
| Conread position: | 5-276 |
| Cow position: | chr11:83323322-83323595 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 60 |
| Conread position: | 5-277 |
| Cow position: | chr11:51756064-51756332 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 122, 200 |
| Conread position: | 5-355 |
| Cow position: | chr11:3393462-3393084 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 5-355 |
| Cow position: | chr11:77319172-77319542 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 78, 98 |
| Conread position: | 5-432 |
| Cow position: | chr11:46580115-46580534 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 5-433 |
| Cow position: | chr11:20238421-20238863 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 6-243 |
| Cow position: | chr11:30110717-30110961 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 115, 198 |
| Conread position: | 6-437 |
| Cow position: | chr11:15632810-15632369 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 289 |
| Conread position: | 7-338 |
| Cow position: | chr11:44637010-44636648 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 9-277 |
| Cow position: | chr11:53553004-53553251 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 162, 55 |
| Conread position: | 11-277 |
| Cow position: | chr11:50072716-50072970 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 155, 66 |
| Conread position: | 12-156 |
| Cow position: | chr11:26277335-26277191 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 85, 89 |
| Conread position: | 13-277 |
| Cow position: | chr11:22978103-22977841 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 13-277 |
| Cow position: | chr11:76114411-76114679 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 13-355 |
| Cow position: | chr11:2917823-2917463 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 136, 56 |
| Conread position: | 13-432 |
| Cow position: | chr11:52297467-52297037 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 225 |
| Conread position: | 13-436 |
| Cow position: | chr11:15016802-15017248 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 304 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 136, 63 |
| Conread position: | 14-277 |
| Cow position: | chr11:50236210-50235944 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 113, 187 |
| Conread position: | 17-331 |
| Cow position: | chr11:10213807-10213471 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 18-154 |
| Cow position: | chr11:44575460-44575599 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 77, 87 |
| Conread position: | 18-437 |
| Cow position: | chr11:27405307-27404880 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 319 |
| Conread position: | 22-355 |
| Cow position: | chr11:11469868-11469523 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 174, 72 |
| Conread position: | 22-436 |
| Cow position: | chr11:62620150-62620566 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 128, 71 |
| Conread position: | 28-268 |
| Cow position: | chr11:2509524-2509288 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 131, 49 |
| Conread position: | 28-297 |
| Cow position: | chr11:19755428-19755704 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 69, 153 |
| Conread position: | 30-338 |
| Cow position: | chr11:29960078-29960402 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 31-276 |
| Cow position: | chr11:19593593-19593849 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 66, 192 |
| Conread position: | 35-277 |
| Cow position: | chr11:61859122-61858870 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 5, 174 |
| Conread position: | 36-345 |
| Cow position: | chr11:2092120-2092445 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 123, 58 |
| Conread position: | 36-356 |
| Cow position: | chr11:2925511-2925176 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 61, 167 |
| Conread position: | 39-436 |
| Cow position: | chr11:39462400-39462809 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 177 |
| Conread position: | 40-276 |
| Cow position: | chr11:52983474-52983707 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 86 |
| Conread position: | 45-277 |
| Cow position: | chr11:69810692-69810935 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 46-264 |
| Cow position: | chr11:8936698-8936472 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 55-242 |
| Cow position: | chr11:81340699-81340507 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 153 |
| Conread position: | 58-277 |
| Cow position: | chr11:15338876-15339096 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 108, 47 |
| Conread position: | 63-277 |
| Cow position: | chr11:5075416-5075195 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 63, 143 |
| Conread position: | 67-344 |
| Cow position: | chr11:48496774-48496480 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 70-437 |
| Cow position: | chr11:34646402-34646786 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 274 |
| Conread position: | 78-435 |
| Cow position: | chr11:26845762-26845380 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 262 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 19, 115 |
| Conread position: | 82-268 |
| Cow position: | chr11:60143476-60143277 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 84-355 |
| Cow position: | chr11:30830791-30830488 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 12, 137 |
| Conread position: | 94-353 |
| Cow position: | chr11:48295870-48296148 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 124 |
| Conread position: | 94-355 |
| Cow position: | chr11:75874914-75874642 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 94-437 |
| Cow position: | chr11:80556058-80556409 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 74, 139 |
| Conread position: | 97-355 |
| Cow position: | chr11:71390723-71390444 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 102-355 |
| Cow position: | chr11:56187465-56187737 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 157 |
| Conread position: | 102-437 |
| Cow position: | chr11:35213315-35212980 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 104-425 |
| Cow position: | chr11:69075756-69076112 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 153 |
| Conread position: | 104-432 |
| Cow position: | chr11:18851766-18852090 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 62, 93 |
| Conread position: | 132-445 |
| Cow position: | chr11:49872998-49872686 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 130 |
| Conread position: | 149-431 |
| Cow position: | chr11:83032588-83032862 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 169, 45 |
| Conread position: | 151-433 |
| Cow position: | chr11:42182949-42183226 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 151-447 |
| Cow position: | chr11:19946344-19946622 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 152-346 |
| Cow position: | chr11:35803043-35803251 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 152-355 |
| Cow position: | chr11:17036620-17036402 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 152-416 |
| Cow position: | chr11:47772483-47772212 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 180 |
| Conread position: | 152-431 |
| Cow position: | chr11:55911725-55911462 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 116, 42 |
| Conread position: | 152-437 |
| Cow position: | chr11:261353-261066 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 166, 36 |
| Conread position: | 152-443 |
| Cow position: | chr11:41293908-41293606 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 153-355 |
| Cow position: | chr11:62813041-62812822 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 154-353 |
| Cow position: | chr11:26275045-26274845 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 155-435 |
| Cow position: | chr11:40608684-40608404 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 202 |
| Conread position: | 158-277 |
| Cow position: | chr11:54218632-54218747 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 159-432 |
| Cow position: | chr11:17721888-17721615 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 187 |
| Conread position: | 161-316 |
| Cow position: | chr11:16342312-16342146 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 166-435 |
| Cow position: | chr11:4637250-4636986 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 127, 148 |
| Conread position: | 213-436 |
| Cow position: | chr11:49255373-49255600 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 151 |
Show alignments to all cow chromosomes.