Cow genome map
| Conread name: | rgul0111_e15.y1 |
| Conread position: | 1-205 |
| Cow position: | chr14:34082876-34083078 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 1-267 |
| Cow position: | chr14:28795956-28795674 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 96, 249 |
| Conread position: | 1-277 |
| Cow position: | chr14:38168963-38168684 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 96, 42 |
| Conread position: | 1-297 |
| Cow position: | chr14:37103483-37103181 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 1-297 |
| Cow position: | chr14:43249865-43249559 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 94, 219 |
| Conread position: | 1-316 |
| Cow position: | chr14:8784456-8784143 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 27 |
| Conread position: | 2-243 |
| Cow position: | chr14:38379300-38379048 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 2-264 |
| Cow position: | chr14:33462438-33462171 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 91, 80 |
| Conread position: | 2-277 |
| Cow position: | chr14:19863161-19863441 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 76, 200 |
| Conread position: | 2-354 |
| Cow position: | chr14:39769951-39770324 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 216 |
| Conread position: | 2-355 |
| Cow position: | chr14:18309031-18309404 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 78, 133 |
| Conread position: | 3-170 |
| Cow position: | chr14:28098128-28097973 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 160, 55 |
| Conread position: | 3-198 |
| Cow position: | chr14:36775878-36775694 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 3-250 |
| Cow position: | chr14:8964821-8964567 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 93, 197 |
| Conread position: | 3-268 |
| Cow position: | chr14:27791808-27791545 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 93, 164 |
| Conread position: | 3-268 |
| Cow position: | chr14:33828427-33828163 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 119, 42 |
| Conread position: | 3-269 |
| Cow position: | chr14:39774777-39775052 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 94, 72 |
| Conread position: | 3-284 |
| Cow position: | chr14:41716385-41716099 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 100, 150 |
| Conread position: | 3-342 |
| Cow position: | chr14:41211134-41210771 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 206 |
| Conread position: | 3-345 |
| Cow position: | chr14:26442060-26442429 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 134 |
| Conread position: | 3-346 |
| Cow position: | chr14:21201553-21201907 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 69, 183 |
| Conread position: | 3-354 |
| Cow position: | chr14:33791467-33791094 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 204 |
| Conread position: | 3-355 |
| Cow position: | chr14:22989312-22988931 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 81 |
| Conread position: | 3-357 |
| Cow position: | chr14:8848526-8848172 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 199 |
| Conread position: | 3-358 |
| Cow position: | chr14:12546309-12546658 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 92, 125 |
| Conread position: | 3-379 |
| Cow position: | chr14:37131936-37131539 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 324 |
| Conread position: | 3-419 |
| Cow position: | chr14:48427354-48426925 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 354 |
| Conread position: | 3-422 |
| Cow position: | chr14:26432963-26433399 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 353 |
| Conread position: | 3-425 |
| Cow position: | chr14:10609968-10609526 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 3-430 |
| Cow position: | chr14:9029407-9029828 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 163, 65 |
| Conread position: | 3-431 |
| Cow position: | chr14:34096317-34096743 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 79 |
| Conread position: | 3-432 |
| Cow position: | chr14:45677501-45677071 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 61 |
| Conread position: | 3-434 |
| Cow position: | chr14:33714410-33714836 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 72 |
| Conread position: | 3-437 |
| Cow position: | chr14:41749486-41749921 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 18 |
| Conread position: | 3-438 |
| Cow position: | chr14:20640346-20640795 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 212 |
| Conread position: | 4-227 |
| Cow position: | chr14:30926981-30926746 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 97, 61 |
| Conread position: | 4-277 |
| Cow position: | chr14:35018479-35018761 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 92, 73 |
| Conread position: | 5-273 |
| Cow position: | chr14:39779029-39778748 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 5-345 |
| Cow position: | chr14:18345455-18345816 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 15 |
| Conread position: | 5-345 |
| Cow position: | chr14:41128169-41127818 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 126 |
| Conread position: | 5-361 |
| Cow position: | chr14:29632607-29632981 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 226 |
| Conread position: | 5-425 |
| Cow position: | chr14:10078536-10078101 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 305 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 122, 33 |
| Conread position: | 5-436 |
| Cow position: | chr14:24237097-24236658 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 7-382 |
| Cow position: | chr14:4991265-4990884 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 143, 35 |
| Conread position: | 10-264 |
| Cow position: | chr14:49824357-49824617 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 125, 44 |
| Conread position: | 11-277 |
| Cow position: | chr14:19372613-19372331 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 13-277 |
| Cow position: | chr14:11043222-11043499 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 84, 204 |
| Conread position: | 13-358 |
| Cow position: | chr14:33751779-33751432 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 58 |
| Conread position: | 13-378 |
| Cow position: | chr14:8750343-8749957 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 17-345 |
| Cow position: | chr14:33300946-33300617 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 82, 99 |
| Conread position: | 17-355 |
| Cow position: | chr14:13846250-13845885 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 76 |
| Conread position: | 22-424 |
| Cow position: | chr14:28114924-28115343 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 298 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 75, 189 |
| Conread position: | 25-277 |
| Cow position: | chr14:3162953-3162719 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 26-277 |
| Cow position: | chr14:15261045-15260801 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 29-316 |
| Cow position: | chr14:27591703-27592014 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 67, 46 |
| Conread position: | 29-353 |
| Cow position: | chr14:1645937-1646279 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 39-422 |
| Cow position: | chr14:16760641-16760249 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 57, 194 |
| Conread position: | 40-355 |
| Cow position: | chr14:20110479-20110825 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 56, 169 |
| Conread position: | 55-435 |
| Cow position: | chr14:20826698-20826328 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 129, 39 |
| Conread position: | 56-277 |
| Cow position: | chr14:15313782-15313553 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 83-436 |
| Cow position: | chr14:24608163-24607790 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 11 |
| Conread position: | 91-431 |
| Cow position: | chr14:15492786-15492432 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 58, 238 |
| Conread position: | 114-276 |
| Cow position: | chr14:17831078-17830905 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 133-435 |
| Cow position: | chr14:41486125-41486432 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 196 |
| Conread position: | 153-433 |
| Cow position: | chr14:24945375-24945655 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 155, 222 |
| Conread position: | 156-425 |
| Cow position: | chr14:16524587-16524316 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 30, 165 |
| Conread position: | 160-426 |
| Cow position: | chr14:19360002-19359715 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 27, 198 |
| Conread position: | 196-437 |
| Cow position: | chr14:12033168-12033410 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 79, 126 |
Show alignments to all cow chromosomes.