Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               76, 22
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               96, 249
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               96, 42
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               94, 219
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 27
               

               Conread position:
               2-243
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               34, 92
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               91, 80
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               76, 200
               

               Conread position:
               2-354
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 216
               

               Conread position:
               2-355
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               78, 133
               

               Conread position:
               3-170
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               160, 55
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-250
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 197
               

               Conread position:
               3-268
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               93, 164
               

               Conread position:
               3-268
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               119, 42
               

               Conread position:
               3-269
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               94, 72
               

               Conread position:
               3-284
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               100, 150
               

               Conread position:
               3-342
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 206
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 134
               

               Conread position:
               3-346
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               69, 183
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 204
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 81
               

               Conread position:
               3-357
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 199
               

               Conread position:
               3-358
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               92, 125
               

               Conread position:
               3-379
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 324
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 354
               

               Conread position:
               3-422
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 353
               

               Conread position:
               3-425
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 86
               

               Conread position:
               3-430
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               163, 65
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 79
               

               Conread position:
               3-432
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               3-434
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 72
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 18
               

               Conread position:
               3-438
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 212
               

               Conread position:
               4-227
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               97, 61
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               92, 73
               

               Conread position:
               5-273
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               5-345
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               5-345
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 126
               

               Conread position:
               5-361
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 226
               

               Conread position:
               5-425
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               305
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               122, 33
               

               Conread position:
               5-436
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 33
               

               Conread position:
               7-382
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               143, 35
               

               Conread position:
               10-264
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               125, 44
               

               Conread position:
               11-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               13-277
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               84, 204
               

               Conread position:
               13-358
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 58
               

               Conread position:
               13-378
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               17-345
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               82, 99
               

               Conread position:
               17-355
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 76
               

               Conread position:
               22-424
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               298
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               75, 189
               

               Conread position:
               25-277
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               26-277
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               29-316
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               29-353
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               39-422
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               268
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               57, 194
               

               Conread position:
               40-355
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               56, 169
               

               Conread position:
               55-435
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               263
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               129, 39
               

               Conread position:
               56-277
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               83-436
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               70, 11
               

               Conread position:
               91-431
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               58, 238
               

               Conread position:
               114-276
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               133-435
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 196
               

               Conread position:
               153-433
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               155, 222
               

               Conread position:
               156-425
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               30, 165
               

               Conread position:
               160-426
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               27, 198
               

               Conread position:
               196-437
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               79, 126
               
Show alignments to all cow chromosomes.