Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               95, 150
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               105, 218
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               166, 76
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               153, 61
               

               Conread position:
               1-433
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 201
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               121, 81
               

               Conread position:
               2-229
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 223
               

               Conread position:
               2-338
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               145, 75
               

               Conread position:
               2-356
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               2-433
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 220
               

               Conread position:
               2-436
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 65
               

               Conread position:
               3-246
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               3-255
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               88, 137
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               3-268
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               163, 95
               

               Conread position:
               3-274
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 217
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               143, 72
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 46
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               145, 73
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               95, 187
               

               Conread position:
               3-339
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               155, 40
               

               Conread position:
               3-339
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               151, 72
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 72
               

               Conread position:
               3-353
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 93
               

               Conread position:
               3-353
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 252
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 92
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 64
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 316
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 125
               

               Conread position:
               3-357
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 72
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 164
               

               Conread position:
               3-429
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               298
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               163, 91
               

               Conread position:
               3-430
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               288
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               269, 59
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 90
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 196
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 74
               

               Conread position:
               3-436
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 163
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 50
               

               Conread position:
               3-446
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 199
               

               Conread position:
               4-345
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 71
               

               Conread position:
               4-355
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               156, 89
               

               Conread position:
               4-355
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               144, 71
               

               Conread position:
               4-425
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               288
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               160, 58
               

               Conread position:
               4-427
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               4-437
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               143, 73
               

               Conread position:
               5-223
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               73, 90
               

               Conread position:
               5-277
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               154, 57
               

               Conread position:
               5-277
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               130, 14
               

               Conread position:
               5-354
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 157
               

               Conread position:
               5-425
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               6-277
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               89, 135
               

               Conread position:
               6-277
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 71
               

               Conread position:
               6-433
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               129, 88
               

               Conread position:
               6-434
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               289
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               142, 48
               

               Conread position:
               7-437
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 82
               

               Conread position:
               9-276
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               89, 45
               

               Conread position:
               13-277
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               83, 149
               

               Conread position:
               13-355
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               149, 69
               

               Conread position:
               13-435
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               298
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               129, 81
               

               Conread position:
               15-277
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               15-354
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               143, 51
               

               Conread position:
               15-354
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 51
               

               Conread position:
               16-277
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 253
               

               Conread position:
               33-276
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 177
               

               Conread position:
               33-437
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               287
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               47, 56
               

               Conread position:
               33-437
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               47, 56
               

               Conread position:
               39-435
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               291
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               110, 55
               

               Conread position:
               41-277
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               55, 158
               

               Conread position:
               42-356
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               122, 10
               

               Conread position:
               46-425
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               105, 47
               

               Conread position:
               47-241
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               113, 46
               

               Conread position:
               49-435
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               273
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               62-425
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               32, 70
               

               Conread position:
               66-437
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 105
               

               Conread position:
               68-436
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               28, 140
               

               Conread position:
               98-286
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               60, 103
               

               Conread position:
               99-432
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 87
               

               Conread position:
               107-277
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               133-433
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               134, 27
               

               Conread position:
               152-433
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 42
               

               Conread position:
               152-434
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 61
               

               Conread position:
               152-435
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               103, 42
               

               Conread position:
               152-435
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               128, 36
               

               Conread position:
               152-436
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               126, 23
               

               Conread position:
               153-345
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               125, 41
               

               Conread position:
               154-341
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               125, 171
               

               Conread position:
               154-437
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               41, 267
               

               Conread position:
               156-434
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 64
               

               Conread position:
               157-437
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               192, 121
               

               Conread position:
               165-421
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 81
               

               Conread position:
               179-437
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               129, 29
               
Show alignments to all cow chromosomes.