Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               95, 197
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               102, 128
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               96, 192
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 14
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 56
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 64
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               96, 150
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               121, 75
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 22
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               147, 61
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               93, 75
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               2-352
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 85
               

               Conread position:
               2-353
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               69, 30
               

               Conread position:
               2-355
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               164, 55
               

               Conread position:
               2-355
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               162, 10
               

               Conread position:
               2-438
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               294
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               111, 59
               

               Conread position:
               3-233
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 203
               

               Conread position:
               3-254
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               93, 73
               

               Conread position:
               3-266
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               42, 203
               

               Conread position:
               3-273
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               145, 74
               

               Conread position:
               3-274
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               163, 200
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               148, 31
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               163, 92
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               93, 54
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               93, 32
               

               Conread position:
               3-279
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               94, 107
               

               Conread position:
               3-286
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 164
               

               Conread position:
               3-322
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               146, 72
               

               Conread position:
               3-340
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               267
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               62, 87
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               272
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               83, 185
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 84
               

               Conread position:
               3-360
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 25
               

               Conread position:
               3-364
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               146, 87
               

               Conread position:
               3-378
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 91
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 196
               

               Conread position:
               3-427
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               284
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               100, 58
               

               Conread position:
               3-433
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               145, 51
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               92, 48
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               285
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               163, 81
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               94, 212
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               91, 133
               

               Conread position:
               4-170
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               139
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               4-264
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               154, 90
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               74, 41
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 24
               

               Conread position:
               4-335
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 208
               

               Conread position:
               4-345
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 60
               

               Conread position:
               4-349
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 45
               

               Conread position:
               4-355
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               152, 93
               

               Conread position:
               4-412
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 89
               

               Conread position:
               4-434
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 257
               

               Conread position:
               5-277
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               122, 72
               

               Conread position:
               5-346
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               60, 133
               

               Conread position:
               5-355
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               193, 46
               

               Conread position:
               5-433
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 40
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               315
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               92, 58
               

               Conread position:
               6-437
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 330
               

               Conread position:
               10-335
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               151, 18
               

               Conread position:
               12-436
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               13-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 57
               

               Conread position:
               17-337
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               77, 179
               

               Conread position:
               22-275
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               75, 38
               

               Conread position:
               27-433
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               120, 67
               

               Conread position:
               27-435
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 42
               

               Conread position:
               28-232
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               28-425
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               239, 56
               

               Conread position:
               36-176
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               37-260
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               60, 96
               

               Conread position:
               39-432
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               290
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               57, 182
               

               Conread position:
               40-349
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               41-355
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               42-433
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 91
               

               Conread position:
               45-345
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               103, 31
               

               Conread position:
               46-435
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               294
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               11, 161
               

               Conread position:
               55-425
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               94, 42
               

               Conread position:
               56-264
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 70
               

               Conread position:
               62-260
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               96, 26
               

               Conread position:
               77-340
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 128
               

               Conread position:
               80-355
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               83-344
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               83-435
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               94-316
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               64, 110
               

               Conread position:
               94-354
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               94-450
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               50, 204
               

               Conread position:
               102-435
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 90
               

               Conread position:
               118-433
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               33, 92
               

               Conread position:
               143-425
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 60
               

               Conread position:
               152-267
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               152-418
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               54, 149
               

               Conread position:
               152-424
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               53, 226
               

               Conread position:
               152-437
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               127, 26
               

               Conread position:
               154-275
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               154-355
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               154-434
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 184
               

               Conread position:
               163-434
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               115, 44
               

               Conread position:
               173-355
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               105, 21
               
Show alignments to all cow chromosomes.