Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               150, 35
               

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 201
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               166, 34
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               105, 209
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               122, 66
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               158, 68
               

               Conread position:
               1-355
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               164, 66
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 296
               

               Conread position:
               2-258
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               94, 25
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               94, 56
               

               Conread position:
               2-335
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               248
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               95, 193
               

               Conread position:
               2-343
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               164, 93
               

               Conread position:
               3-201
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               135, 72
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               71, 127
               

               Conread position:
               3-245
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               158, 90
               

               Conread position:
               3-250
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               137, 74
               

               Conread position:
               3-265
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               155, 88
               

               Conread position:
               3-273
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               134, 91
               

               Conread position:
               3-274
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 13
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               93, 217
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               111, 73
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               125, 37
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 121
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               145, 79
               

               Conread position:
               3-286
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               146, 74
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 79
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               3-351
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               139, 92
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 300
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 74
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 217
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 25
               

               Conread position:
               3-356
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 75
               

               Conread position:
               3-410
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 53
               

               Conread position:
               3-432
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 307
               

               Conread position:
               3-433
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               3-433
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 113
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               3-438
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               319
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               90, 45
               

               Conread position:
               3-439
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               3-447
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               115, 40
               

               Conread position:
               4-199
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               4-254
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               180, 90
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               43, 66
               

               Conread position:
               4-413
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               92, 83
               

               Conread position:
               4-417
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 73
               

               Conread position:
               4-417
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               4-435
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               61, 91
               

               Conread position:
               4-437
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               93, 39
               

               Conread position:
               5-258
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 90
               

               Conread position:
               5-353
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               262
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               159, 52
               

               Conread position:
               5-353
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               90, 70
               

               Conread position:
               5-355
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               264
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               90, 61
               

               Conread position:
               5-436
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               285
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               159, 61
               

               Conread position:
               6-267
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               114, 69
               

               Conread position:
               6-277
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               89, 76
               

               Conread position:
               6-433
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               146, 13
               

               Conread position:
               7-268
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               116, 9
               

               Conread position:
               9-316
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               13-233
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               83, 121
               

               Conread position:
               13-339
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               82, 112
               

               Conread position:
               16-282
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               80, 59
               

               Conread position:
               17-268
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               127, 57
               

               Conread position:
               17-433
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               69, 307
               

               Conread position:
               22-173
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               142, 72
               

               Conread position:
               27-354
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               28-277
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               99, 65
               

               Conread position:
               29-343
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               129, 14
               

               Conread position:
               33-355
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               35-346
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 91
               

               Conread position:
               36-433
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 56
               

               Conread position:
               38-277
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               90, 39
               

               Conread position:
               39-357
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 101
               

               Conread position:
               47-161
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               80-267
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 127
               

               Conread position:
               82-427
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 221
               

               Conread position:
               83-277
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               83-355
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               89-278
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               8, 12
               

               Conread position:
               96-354
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               96-433
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 254
               

               Conread position:
               100-355
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               66, 163
               

               Conread position:
               102-437
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               56, 207
               

               Conread position:
               105-341
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               43, 92
               

               Conread position:
               106-355
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               24, 38
               

               Conread position:
               112-433
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               38, 97
               

               Conread position:
               145-434
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               181, 163
               

               Conread position:
               152-425
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               40, 128
               

               Conread position:
               152-435
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               152-435
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               152-435
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 47
               

               Conread position:
               154-277
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               167-425
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               198-436
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               131, 168
               
Show alignments to all cow chromosomes.