Cow genome map
Conread name: | rgul0111_e15.y1 |
Conread position: | 1-277 |
Cow position: | chr21:725065-724771 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 278 |
Conread position: | 1-292 |
Cow position: | chr21:45151796-45151500 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 199 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 96, 69 |
Conread position: | 1-297 |
Cow position: | chr21:39664562-39664263 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 202 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 121, 93 |
Conread position: | 1-355 |
Cow position: | chr21:81897-82274 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 262 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 94, 188 |
Conread position: | 1-424 |
Cow position: | chr21:29069502-29069065 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 93 |
Conread position: | 1-425 |
Cow position: | chr21:20262507-20262088 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 233 |
Conread position: | 1-441 |
Cow position: | chr21:7672960-7673387 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 300 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 149, 8 |
Conread position: | 2-277 |
Cow position: | chr21:22860829-22861116 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 90 |
Conread position: | 2-277 |
Cow position: | chr21:24130908-24131183 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 198 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 157, 92 |
Conread position: | 2-334 |
Cow position: | chr21:30990441-30990105 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 65 |
Conread position: | 2-349 |
Cow position: | chr21:29484811-29485177 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 87 |
Conread position: | 2-433 |
Cow position: | chr21:5392715-5392238 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 117 |
Conread position: | 2-433 |
Cow position: | chr21:37299292-37299727 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 302 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 10, 97 |
Conread position: | 2-436 |
Cow position: | chr21:23821995-23822422 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 306 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 8, 27 |
Conread position: | 3-236 |
Cow position: | chr21:35897797-35897566 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 180 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 180, 74 |
Conread position: | 3-259 |
Cow position: | chr21:8351475-8351215 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 180 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 93, 25 |
Conread position: | 3-260 |
Cow position: | chr21:6102438-6102164 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 197 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 33, 214 |
Conread position: | 3-268 |
Cow position: | chr21:2904631-2904373 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 195 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 145, 67 |
Conread position: | 3-268 |
Cow position: | chr21:28881971-28882244 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 186 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 94, 73 |
Conread position: | 3-276 |
Cow position: | chr21:13488348-13488640 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 3-277 |
Cow position: | chr21:802465-802203 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 64 |
Conread position: | 3-277 |
Cow position: | chr21:2367169-2367446 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 201 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 146, 72 |
Conread position: | 3-277 |
Cow position: | chr21:18845186-18844898 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 210 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 69, 25 |
Conread position: | 3-277 |
Cow position: | chr21:28442573-28442846 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 191 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 85, 164 |
Conread position: | 3-277 |
Cow position: | chr21:30607259-30606973 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 206 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 101, 74 |
Conread position: | 3-277 |
Cow position: | chr21:33210027-33210302 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 200 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 94, 166 |
Conread position: | 3-277 |
Cow position: | chr21:33729263-33729544 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 199 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 124, 80 |
Conread position: | 3-277 |
Cow position: | chr21:42540391-42540108 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 31 |
Conread position: | 3-277 |
Cow position: | chr21:44515103-44515378 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 212 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 135, 69 |
Conread position: | 3-286 |
Cow position: | chr21:28512361-28512637 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 187 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 163, 91 |
Conread position: | 3-286 |
Cow position: | chr21:33263678-33263967 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 215 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 17, 53 |
Conread position: | 3-337 |
Cow position: | chr21:42348849-42348511 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 239 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 93, 166 |
Conread position: | 3-345 |
Cow position: | chr21:643162-643519 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 74 |
Conread position: | 3-353 |
Cow position: | chr21:24858140-24858516 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 219 |
Conread position: | 3-353 |
Cow position: | chr21:31691307-31691681 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 264 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 93, 220 |
Conread position: | 3-354 |
Cow position: | chr21:33982980-33982605 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 125 |
Conread position: | 3-355 |
Cow position: | chr21:32559525-32559162 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 267 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 94, 51 |
Conread position: | 3-356 |
Cow position: | chr21:27229966-27229592 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 267 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 93, 74 |
Conread position: | 3-365 |
Cow position: | chr21:33350571-33350952 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 226 |
Conread position: | 3-421 |
Cow position: | chr21:11645140-11644711 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 95 |
Conread position: | 3-425 |
Cow position: | chr21:30250380-30249918 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 323 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 85, 212 |
Conread position: | 3-433 |
Cow position: | chr21:29214320-29213892 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 90 |
Conread position: | 3-436 |
Cow position: | chr21:641413-641854 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 42 |
Conread position: | 3-437 |
Cow position: | chr21:13365173-13365636 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 322 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 146, 74 |
Conread position: | 3-438 |
Cow position: | chr21:6051335-6051777 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 300 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 161, 216 |
Conread position: | 4-199 |
Cow position: | chr21:7132633-7132428 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 161 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 91, 109 |
Conread position: | 4-276 |
Cow position: | chr21:19363634-19363346 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 0 |
Conread position: | 4-277 |
Cow position: | chr21:10007812-10007525 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 203 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 6, 59 |
Conread position: | 4-419 |
Cow position: | chr21:11740301-11739866 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 299 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 81, 302 |
Conread position: | 4-432 |
Cow position: | chr21:37479786-37480230 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 281 |
Conread position: | 5-267 |
Cow position: | chr21:28989443-28989715 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 193 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 92, 72 |
Conread position: | 5-429 |
Cow position: | chr21:10263871-10264298 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 283 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 169, 72 |
Conread position: | 5-432 |
Cow position: | chr21:27569330-27568893 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 73 |
Conread position: | 6-206 |
Cow position: | chr21:46860270-46860065 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 150 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 144, 46 |
Conread position: | 7-323 |
Cow position: | chr21:2679385-2679719 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 244 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 88, 211 |
Conread position: | 8-277 |
Cow position: | chr21:16187971-16187693 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 208 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 150, 20 |
Conread position: | 9-286 |
Cow position: | chr21:15610986-15611263 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 205 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 94, 66 |
Conread position: | 9-384 |
Cow position: | chr21:27624547-27624929 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 259 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 87, 27 |
Conread position: | 9-433 |
Cow position: | chr21:44826049-44825608 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 64 |
Conread position: | 13-286 |
Cow position: | chr21:12801908-12801624 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 210 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 131, 82 |
Conread position: | 14-198 |
Cow position: | chr21:44331447-44331258 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 135 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 80, 175 |
Conread position: | 14-432 |
Cow position: | chr21:32297671-32297242 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 153 |
Conread position: | 14-432 |
Cow position: | chr21:46264016-46264457 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 305 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 137, 17 |
Conread position: | 15-433 |
Cow position: | chr21:41590716-41590299 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 83 |
Conread position: | 39-273 |
Cow position: | chr21:44733297-44733063 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 174 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 57, 100 |
Conread position: | 39-355 |
Cow position: | chr21:29978898-29978554 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 243 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 41, 180 |
Conread position: | 45-204 |
Cow position: | chr21:37355552-37355715 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 46-286 |
Cow position: | chr21:12301632-12301388 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 169 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 50, 62 |
Conread position: | 51-430 |
Cow position: | chr21:30222218-30222606 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 278 |
Conread position: | 59-277 |
Cow position: | chr21:2657704-2657923 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 160 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 97, 71 |
Conread position: | 62-345 |
Cow position: | chr21:35437580-35437294 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 185 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 9, 17 |
Conread position: | 68-268 |
Cow position: | chr21:9360335-9360540 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 153 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 28, 60 |
Conread position: | 90-355 |
Cow position: | chr21:44214039-44214321 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 199 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 74, 136 |
Conread position: | 102-345 |
Cow position: | chr21:47719372-47719108 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 188 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 119-355 |
Cow position: | chr21:829258-829000 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 185 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 27, 196 |
Conread position: | 120-355 |
Cow position: | chr21:674642-674878 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 164 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 34, 71 |
Conread position: | 152-276 |
Cow position: | chr21:297743-297867 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 152-353 |
Cow position: | chr21:8349319-8349533 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 150 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 152-355 |
Cow position: | chr21:28030279-28030493 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 157 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 127, 39 |
Conread position: | 152-432 |
Cow position: | chr21:30980587-30980293 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 200 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 115, 42 |
Conread position: | 152-436 |
Cow position: | chr21:47383571-47383279 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 191 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 43, 162 |
Conread position: | 154-286 |
Cow position: | chr21:20183064-20183194 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 100 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 159-432 |
Cow position: | chr21:71583-71852 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 177 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 160, 134 |
Conread position: | 160-427 |
Cow position: | chr21:46599358-46599619 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 177 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 162, 133 |
Conread position: | 162-437 |
Cow position: | chr21:7394284-7394000 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 190 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 104, 34 |
Conread position: | 171-379 |
Cow position: | chr21:19360167-19359948 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 158 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 108, 17 |
Show alignments to all cow chromosomes.