Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 278
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               96, 69
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               121, 93
               

               Conread position:
               1-355
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               262
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               94, 188
               

               Conread position:
               1-424
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 93
               

               Conread position:
               1-425
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 233
               

               Conread position:
               1-441
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               300
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               149, 8
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 90
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               157, 92
               

               Conread position:
               2-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 65
               

               Conread position:
               2-349
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 87
               

               Conread position:
               2-433
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 117
               

               Conread position:
               2-433
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               10, 97
               

               Conread position:
               2-436
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               3-236
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               180, 74
               

               Conread position:
               3-259
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               93, 25
               

               Conread position:
               3-260
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 214
               

               Conread position:
               3-268
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               145, 67
               

               Conread position:
               3-268
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               94, 73
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 64
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               146, 72
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               85, 164
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               101, 74
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               94, 166
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               124, 80
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 31
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               135, 69
               

               Conread position:
               3-286
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               163, 91
               

               Conread position:
               3-286
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               3-337
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               93, 166
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 74
               

               Conread position:
               3-353
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 219
               

               Conread position:
               3-353
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               93, 220
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 125
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               267
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               94, 51
               

               Conread position:
               3-356
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               3-365
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 226
               

               Conread position:
               3-421
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 95
               

               Conread position:
               3-425
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               323
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               85, 212
               

               Conread position:
               3-433
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 90
               

               Conread position:
               3-436
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 42
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               322
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               146, 74
               

               Conread position:
               3-438
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               300
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               161, 216
               

               Conread position:
               4-199
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               91, 109
               

               Conread position:
               4-276
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               6, 59
               

               Conread position:
               4-419
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               299
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               81, 302
               

               Conread position:
               4-432
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 281
               

               Conread position:
               5-267
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               92, 72
               

               Conread position:
               5-429
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               283
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               169, 72
               

               Conread position:
               5-432
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 73
               

               Conread position:
               6-206
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               144, 46
               

               Conread position:
               7-323
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               88, 211
               

               Conread position:
               8-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               150, 20
               

               Conread position:
               9-286
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               9-384
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               87, 27
               

               Conread position:
               9-433
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 64
               

               Conread position:
               13-286
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               131, 82
               

               Conread position:
               14-198
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 175
               

               Conread position:
               14-432
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 153
               

               Conread position:
               14-432
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               305
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               137, 17
               

               Conread position:
               15-433
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 83
               

               Conread position:
               39-273
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               57, 100
               

               Conread position:
               39-355
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               41, 180
               

               Conread position:
               45-204
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               46-286
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               51-430
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 278
               

               Conread position:
               59-277
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               97, 71
               

               Conread position:
               62-345
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               68-268
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 60
               

               Conread position:
               90-355
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               74, 136
               

               Conread position:
               102-345
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               119-355
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 196
               

               Conread position:
               120-355
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               34, 71
               

               Conread position:
               152-276
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               152-353
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               152-355
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               127, 39
               

               Conread position:
               152-432
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               115, 42
               

               Conread position:
               152-436
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               43, 162
               

               Conread position:
               154-286
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               159-432
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               160, 134
               

               Conread position:
               160-427
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               162, 133
               

               Conread position:
               162-437
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               104, 34
               

               Conread position:
               171-379
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               108, 17
               
Show alignments to all cow chromosomes.