Cow genome map

Conread name: rgul0111_e15.y1

Conread position: 1-192
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 96, 52

Conread position: 1-252
Cow position:
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 199

Conread position: 1-264
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 92, 43

Conread position: 1-277
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 96, 0

Conread position: 1-286
Cow position:
Alignm length: 291
Alignm identity: 185
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 122, 105

Conread position: 1-353
Cow position:
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 89

Conread position: 1-425
Cow position:
Alignm length: 435
Alignm identity: 284
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 19

Conread position: 1-435
Cow position:
Alignm length: 447
Alignm identity: 294
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 126, 75

Conread position: 1-437
Cow position:
Alignm length: 454
Alignm identity: 293
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 126, 26

Conread position: 1-437
Cow position:
Alignm length: 447
Alignm identity: 304
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 150, 90

Conread position: 1-438
Cow position:
Alignm length: 459
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 86

Conread position: 2-173
Cow position:
Alignm length: 174
Alignm identity: 145
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 95, 38

Conread position: 2-277
Cow position:
Alignm length: 292
Alignm identity: 215
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 94, 74

Conread position: 2-277
Cow position:
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 195

Conread position: 2-286
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 2-338
Cow position:
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 223

Conread position: 2-345
Cow position:
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 215

Conread position: 2-345
Cow position:
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 197

Conread position: 2-346
Cow position:
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 136

Conread position: 2-352
Cow position:
Alignm length: 371
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 226

Conread position: 2-416
Cow position:
Alignm length: 446
Alignm identity: 302
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 156, 91

Conread position: 2-430
Cow position:
Alignm length: 459
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 26

Conread position: 2-433
Cow position:
Alignm length: 467
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 64

Conread position: 2-437
Cow position:
Alignm length: 455
Alignm identity: 301
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 158, 93

Conread position: 2-437
Cow position:
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 88

Conread position: 2-449
Cow position:
Alignm length: 460
Alignm identity: 300
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 46, 211

Conread position: 3-208
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 178

Conread position: 3-233
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 145, 85

Conread position: 3-263
Cow position:
Alignm length: 276
Alignm identity: 206
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 69, 45

Conread position: 3-273
Cow position:
Alignm length: 282
Alignm identity: 207
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 21, 79

Conread position: 3-276
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 161, 62

Conread position: 3-277
Cow position:
Alignm length: 288
Alignm identity: 206
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 161, 74

Conread position: 3-277
Cow position:
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 73

Conread position: 3-277
Cow position:
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 3-277
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 94, 64

Conread position: 3-277
Cow position:
Alignm length: 285
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 103, 179

Conread position: 3-291
Cow position:
Alignm length: 293
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 94, 74

Conread position: 3-338
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 73

Conread position: 3-344
Cow position:
Alignm length: 371
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 90, 114

Conread position: 3-345
Cow position:
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 72

Conread position: 3-354
Cow position:
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 84

Conread position: 3-354
Cow position:
Alignm length: 368
Alignm identity: 258
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 272, 90

Conread position: 3-355
Cow position:
Alignm length: 370
Alignm identity: 259
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 146, 74

Conread position: 3-355
Cow position:
Alignm length: 375
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 160, 74

Conread position: 3-355
Cow position:
Alignm length: 374
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 95

Conread position: 3-355
Cow position:
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 95

Conread position: 3-355
Cow position:
Alignm length: 372
Alignm identity: 257
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 75, 40

Conread position: 3-367
Cow position:
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 91

Conread position: 3-387
Cow position:
Alignm length: 403
Alignm identity: 269
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 93, 148

Conread position: 3-415
Cow position:
Alignm length: 423
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 79

Conread position: 3-421
Cow position:
Alignm length: 445
Alignm identity: 296
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 95, 74

Conread position: 3-425
Cow position:
Alignm length: 439
Alignm identity: 300
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 144, 20

Conread position: 3-425
Cow position:
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 24

Conread position: 3-429
Cow position:
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 202

Conread position: 3-432
Cow position:
Alignm length: 441
Alignm identity: 297
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 94, 26

Conread position: 3-432
Cow position:
Alignm length: 440
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 84

Conread position: 3-432
Cow position:
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 184

Conread position: 3-432
Cow position:
Alignm length: 445
Alignm identity: 295
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 145, 49

Conread position: 3-433
Cow position:
Alignm length: 441
Alignm identity: 293
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 93, 74

Conread position: 3-434
Cow position:
Alignm length: 445
Alignm identity: 299
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 62

Conread position: 3-435
Cow position:
Alignm length: 458
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 51

Conread position: 3-436
Cow position:
Alignm length: 440
Alignm identity: 292
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 100

Conread position: 3-437
Cow position:
Alignm length: 452
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 130

Conread position: 4-162
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 4-345
Cow position:
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 4-355
Cow position:
Alignm length: 379
Alignm identity: 266
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 91

Conread position: 4-438
Cow position:
Alignm length: 445
Alignm identity: 294
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 12

Conread position: 5-276
Cow position:
Alignm length: 291
Alignm identity: 195
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 208

Conread position: 5-277
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 92, 31

Conread position: 5-327
Cow position:
Alignm length: 341
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 31

Conread position: 5-345
Cow position:
Alignm length: 370
Alignm identity: 262
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 64

Conread position: 5-346
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 84

Conread position: 5-355
Cow position:
Alignm length: 372
Alignm identity: 249
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 144, 70

Conread position: 5-433
Cow position:
Alignm length: 451
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 196

Conread position: 5-436
Cow position:
Alignm length: 459
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 47

Conread position: 5-438
Cow position:
Alignm length: 458
Alignm identity: 306
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 247

Conread position: 5-453
Cow position:
Alignm length: 473
Alignm identity: 316
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 145, 71

Conread position: 6-353
Cow position:
Alignm length: 377
Alignm identity: 267
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 90, 228

Conread position: 6-424
Cow position:
Alignm length: 429
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 66

Conread position: 6-425
Cow position:
Alignm length: 448
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 340

Conread position: 6-434
Cow position:
Alignm length: 446
Alignm identity: 297
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 124, 64

Conread position: 6-437
Cow position:
Alignm length: 449
Alignm identity: 296
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 141, 82

Conread position: 6-441
Cow position:
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 88

Conread position: 9-353
Cow position:
Alignm length: 366
Alignm identity: 256
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 128, 84

Conread position: 12-277
Cow position:
Alignm length: 278
Alignm identity: 194
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 42, 53

Conread position: 13-187
Cow position:
Alignm length: 175
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 13-353
Cow position:
Alignm length: 358
Alignm identity: 241
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 65, 197

Conread position: 13-420
Cow position:
Alignm length: 426
Alignm identity: 287
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 67, 206

Conread position: 13-424
Cow position:
Alignm length: 435
Alignm identity: 285
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 55

Conread position: 13-434
Cow position:
Alignm length: 428
Alignm identity: 280
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 153, 85

Conread position: 15-345
Cow position:
Alignm length: 359
Alignm identity: 249
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 80

Conread position: 35-277
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 151, 56

Conread position: 36-186
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 37-354
Cow position:
Alignm length: 343
Alignm identity: 232
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 112, 6

Conread position: 38-433
Cow position:
Alignm length: 411
Alignm identity: 268
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 31, 41

Conread position: 39-436
Cow position:
Alignm length: 406
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 31

Conread position: 40-162
Cow position:
Alignm length: 128
Alignm identity: 111
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 41-434
Cow position:
Alignm length: 417
Alignm identity: 286
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 6

Conread position: 45-277
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 113, 157

Conread position: 54-433
Cow position:
Alignm length: 399
Alignm identity: 278
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 110, 294

Conread position: 58-430
Cow position:
Alignm length: 398
Alignm identity: 259
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 329

Conread position: 63-437
Cow position:
Alignm length: 387
Alignm identity: 259
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 63

Conread position: 67-427
Cow position:
Alignm length: 385
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 100

Conread position: 70-432
Cow position:
Alignm length: 379
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 316

Conread position: 82-276
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 132

Conread position: 84-344
Cow position:
Alignm length: 283
Alignm identity: 200
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 80, 121

Conread position: 85-450
Cow position:
Alignm length: 378
Alignm identity: 244
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 42

Conread position: 90-435
Cow position:
Alignm length: 362
Alignm identity: 238
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 111

Conread position: 97-353
Cow position:
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 105

Conread position: 103-277
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 17

Conread position: 131-437
Cow position:
Alignm length: 327
Alignm identity: 222
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 260

Conread position: 152-421
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 153-345
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 200

Conread position: 154-377
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 44, 147

Conread position: 155-417
Cow position:
Alignm length: 269
Alignm identity: 181
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 140, 156

Conread position: 157-347
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 111, 43

Conread position: 189-436
Cow position:
Alignm length: 250
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 130, 104

Show alignments to all cow chromosomes.