Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               96, 142
               

               Conread position:
               1-358
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 74
               

               Conread position:
               2-185
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               2-273
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               70, 76
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               12, 74
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               94, 78
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 98
               

               Conread position:
               2-338
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               27, 72
               

               Conread position:
               2-387
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 264
               

               Conread position:
               2-434
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 92
               

               Conread position:
               2-435
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 98
               

               Conread position:
               3-170
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               94, 46
               

               Conread position:
               3-228
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               92, 72
               

               Conread position:
               3-237
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               184, 91
               

               Conread position:
               3-247
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               3-258
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               45, 193
               

               Conread position:
               3-273
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               3-274
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 91
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 72
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 259
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               94, 197
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 201
               

               Conread position:
               3-356
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 336
               

               Conread position:
               3-433
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 167
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 90
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               151, 51
               

               Conread position:
               3-442
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 201
               

               Conread position:
               4-162
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               4-259
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               155, 50
               

               Conread position:
               4-424
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               147, 73
               

               Conread position:
               4-431
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 69
               

               Conread position:
               4-435
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 42
               

               Conread position:
               4-435
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               310
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               145, 71
               

               Conread position:
               4-442
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 71
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 215
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               145, 54
               

               Conread position:
               6-281
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               81, 202
               

               Conread position:
               9-425
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               86, 34
               

               Conread position:
               10-277
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 85
               

               Conread position:
               17-226
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               127, 60
               

               Conread position:
               17-277
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               180, 50
               

               Conread position:
               17-434
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 220
               

               Conread position:
               18-425
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 58
               

               Conread position:
               24-358
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               28-342
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 44
               

               Conread position:
               31-267
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               75, 120
               

               Conread position:
               36-267
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 188
               

               Conread position:
               40-437
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               56-425
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               108, 38
               

               Conread position:
               58-277
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               29, 104
               

               Conread position:
               67-431
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               91-424
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               58, 123
               

               Conread position:
               94-273
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 116
               

               Conread position:
               94-275
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               61, 117
               

               Conread position:
               94-277
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               110-375
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 90
               

               Conread position:
               113-432
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               37, 234
               

               Conread position:
               120-355
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               155, 74
               

               Conread position:
               124-433
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               24, 81
               

               Conread position:
               152-336
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 53
               

               Conread position:
               152-382
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               152-425
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               152-431
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               36, 142
               

               Conread position:
               154-434
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 209
               

               Conread position:
               155-353
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               156-356
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               160-349
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               119, 185
               

               Conread position:
               160-355
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               160-438
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               133, 34
               

               Conread position:
               206-433
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 60
               
Show alignments to all cow chromosomes.