Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               167, 93
               

               Conread position:
               2-275
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               12, 214
               

               Conread position:
               2-282
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               94, 282
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 289
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               95, 75
               

               Conread position:
               2-355
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               148, 49
               

               Conread position:
               2-443
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               94, 189
               

               Conread position:
               2-449
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               329
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               147, 73
               

               Conread position:
               3-236
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               57, 214
               

               Conread position:
               3-261
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               3-264
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               111, 91
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               267, 91
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               155, 91
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               143, 91
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 61
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               159, 35
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               146, 91
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 189
               

               Conread position:
               3-361
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               259
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               3-421
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 300
               

               Conread position:
               3-424
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 111
               

               Conread position:
               3-434
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               304
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               93, 203
               

               Conread position:
               3-438
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 306
               

               Conread position:
               3-439
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               299
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               93, 28
               

               Conread position:
               4-264
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 147
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               92, 175
               

               Conread position:
               4-345
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               260
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               64, 251
               

               Conread position:
               4-431
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 201
               

               Conread position:
               4-437
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               298
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               92, 77
               

               Conread position:
               5-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               144, 27
               

               Conread position:
               5-277
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               5-450
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               92, 62
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               301
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               90, 61
               

               Conread position:
               8-286
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               150, 59
               

               Conread position:
               9-345
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 42
               

               Conread position:
               13-277
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               145, 42
               

               Conread position:
               13-353
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               137, 81
               

               Conread position:
               13-431
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               301
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               151, 80
               

               Conread position:
               14-277
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               82, 12
               

               Conread position:
               17-436
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               17-436
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 122
               

               Conread position:
               36-277
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               92, 61
               

               Conread position:
               39-345
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               57, 177
               

               Conread position:
               39-355
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 36
               

               Conread position:
               46-355
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               47-200
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 160
               

               Conread position:
               47-274
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               48, 40
               

               Conread position:
               54-356
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               42, 169
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               34, 130
               

               Conread position:
               78-227
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               80-297
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 129
               

               Conread position:
               93-432
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               56, 245
               

               Conread position:
               101-339
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               107, 65
               

               Conread position:
               102-286
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               104-434
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               106-275
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               152-277
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               152-421
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               35, 52
               

               Conread position:
               152-435
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               153-432
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               126, 21
               

               Conread position:
               156-355
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               151, 37
               

               Conread position:
               157-419
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               151, 186
               

               Conread position:
               158-432
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               112, 16
               

               Conread position:
               160-355
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               161-436
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               43, 145
               

               Conread position:
               190-425
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 90
               
Show alignments to all cow chromosomes.