Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               97, 76
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               127, 52
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 87
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               166, 26
               

               Conread position:
               2-433
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 190
               

               Conread position:
               3-227
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 72
               

               Conread position:
               3-232
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               141, 25
               

               Conread position:
               3-236
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               155, 77
               

               Conread position:
               3-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               180, 90
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 197
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 211
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 74
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               3-432
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 136
               

               Conread position:
               3-433
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 72
               

               Conread position:
               4-173
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               4-414
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               92, 275
               

               Conread position:
               4-436
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 47
               

               Conread position:
               5-276
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 82
               

               Conread position:
               12-355
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 40
               

               Conread position:
               13-217
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               83, 74
               

               Conread position:
               14-438
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               135, 57
               

               Conread position:
               16-265
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               19-277
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               77, 56
               

               Conread position:
               26-425
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 209
               

               Conread position:
               27-433
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               312
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               126, 34
               

               Conread position:
               28-268
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 66
               

               Conread position:
               28-353
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               36-425
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               291
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               60, 25
               

               Conread position:
               45-437
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 95
               

               Conread position:
               59-275
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               68-351
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               71-238
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 23
               

               Conread position:
               79-430
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               17, 127
               

               Conread position:
               82-436
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               82-436
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               266
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               14, 325
               

               Conread position:
               109-439
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               115-432
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 151
               

               Conread position:
               152-433
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               44, 137
               

               Conread position:
               152-436
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               157, 42
               

               Conread position:
               159-430
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 42
               

               Conread position:
               160-437
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               162-373
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               108, 174
               

               Conread position:
               162-438
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               113, 12
               

               Conread position:
               164-429
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               176-437
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               12, 140
               
Show alignments to all cow chromosomes.