Cow genome map
| Conread name: | rgul0111_e15.y1 |
| Conread position: | 1-192 |
| Cow position: | chr26:14395455-14395258 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 97, 76 |
| Conread position: | 1-276 |
| Cow position: | chr26:20256626-20256897 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 127, 52 |
| Conread position: | 1-276 |
| Cow position: | chr26:21637257-21636971 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 87 |
| Conread position: | 2-276 |
| Cow position: | chr26:26466938-26466666 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 166, 26 |
| Conread position: | 2-433 |
| Cow position: | chr26:33202278-33201851 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 190 |
| Conread position: | 3-227 |
| Cow position: | chr26:7525686-7525456 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 72 |
| Conread position: | 3-232 |
| Cow position: | chr26:28760304-28760069 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 141, 25 |
| Conread position: | 3-236 |
| Cow position: | chr26:24280611-24280850 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 155, 77 |
| Conread position: | 3-264 |
| Cow position: | chr26:11370716-11370966 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 180, 90 |
| Conread position: | 3-277 |
| Cow position: | chr26:32955842-32955563 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 197 |
| Conread position: | 3-277 |
| Cow position: | chr26:35704168-35704455 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 211 |
| Conread position: | 3-355 |
| Cow position: | chr26:32898089-32897717 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 74 |
| Conread position: | 3-431 |
| Cow position: | chr26:23097395-23096975 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 3-432 |
| Cow position: | chr26:26888352-26887919 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 136 |
| Conread position: | 3-433 |
| Cow position: | chr26:20291900-20291473 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 72 |
| Conread position: | 4-173 |
| Cow position: | chr26:13706216-13706052 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 92, 57 |
| Conread position: | 4-414 |
| Cow position: | chr26:27491722-27491295 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 92, 275 |
| Conread position: | 4-436 |
| Cow position: | chr26:9491711-9492141 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 47 |
| Conread position: | 5-276 |
| Cow position: | chr26:32652942-32652668 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 82 |
| Conread position: | 12-355 |
| Cow position: | chr26:8307722-8307364 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 13-217 |
| Cow position: | chr26:30128227-30128014 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 83, 74 |
| Conread position: | 14-438 |
| Cow position: | chr26:12145315-12144892 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 16-265 |
| Cow position: | chr26:5306927-5307198 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 19-277 |
| Cow position: | chr26:21859622-21859891 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 77, 56 |
| Conread position: | 26-425 |
| Cow position: | chr26:17148505-17148929 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 209 |
| Conread position: | 27-433 |
| Cow position: | chr26:19445943-19446355 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 312 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 126, 34 |
| Conread position: | 28-268 |
| Cow position: | chr26:32815968-32815732 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 66 |
| Conread position: | 28-353 |
| Cow position: | chr26:22892633-22892287 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 68, 28 |
| Conread position: | 36-425 |
| Cow position: | chr26:14175096-14175505 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 291 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 45-437 |
| Cow position: | chr26:829632-830037 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 59-275 |
| Cow position: | chr26:11270084-11270300 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 68-351 |
| Cow position: | chr26:26950600-26950302 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 71-238 |
| Cow position: | chr26:7155826-7155999 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 79-430 |
| Cow position: | chr26:20769709-20770066 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 17, 127 |
| Conread position: | 82-436 |
| Cow position: | chr26:647859-647500 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 77, 15 |
| Conread position: | 82-436 |
| Cow position: | chr26:12964839-12964459 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 266 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 14, 325 |
| Conread position: | 109-439 |
| Cow position: | chr26:31137562-31137240 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 115-432 |
| Cow position: | chr26:34724982-34724656 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 151 |
| Conread position: | 152-433 |
| Cow position: | chr26:23924791-23925063 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 44, 137 |
| Conread position: | 152-436 |
| Cow position: | chr26:7687296-7687020 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 157, 42 |
| Conread position: | 159-430 |
| Cow position: | chr26:678030-677744 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 120, 42 |
| Conread position: | 160-437 |
| Cow position: | chr26:18529733-18530011 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 63 |
| Conread position: | 162-373 |
| Cow position: | chr26:32863714-32863497 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 108, 174 |
| Conread position: | 162-438 |
| Cow position: | chr26:12940359-12940632 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 113, 12 |
| Conread position: | 164-429 |
| Cow position: | chr26:10145857-10146115 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 176-437 |
| Cow position: | chr26:7314586-7314852 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 140 |
Show alignments to all cow chromosomes.