Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               156, 105
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               126, 81
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               96, 197
               

               Conread position:
               2-225
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               149, 91
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               146, 86
               

               Conread position:
               2-345
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 68
               

               Conread position:
               2-353
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               130, 75
               

               Conread position:
               2-378
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               257
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               154, 74
               

               Conread position:
               2-430
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               304
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               220, 74
               

               Conread position:
               2-439
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               309
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               3-237
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               145, 91
               

               Conread position:
               3-245
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               156, 40
               

               Conread position:
               3-251
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               155, 25
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               93, 66
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               142, 74
               

               Conread position:
               3-327
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 51
               

               Conread position:
               3-341
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               162, 29
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               94, 45
               

               Conread position:
               3-346
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               95, 57
               

               Conread position:
               3-351
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 14
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 89
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 13
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               161, 60
               

               Conread position:
               3-407
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               93, 54
               

               Conread position:
               3-432
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               312
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               93, 192
               

               Conread position:
               3-432
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               283
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               125, 91
               

               Conread position:
               3-432
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 210
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               103, 72
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               300
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               4-225
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               158, 49
               

               Conread position:
               4-275
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               89, 73
               

               Conread position:
               4-372
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               10, 75
               

               Conread position:
               4-437
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 302
               

               Conread position:
               4-437
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 264
               

               Conread position:
               5-340
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-425
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               292
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               90, 200
               

               Conread position:
               5-432
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               289
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               5-434
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               296
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               273, 49
               

               Conread position:
               13-425
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               305
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               13-433
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 263
               

               Conread position:
               14-392
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               23-430
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               69, 264
               

               Conread position:
               23-433
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 71
               

               Conread position:
               28-277
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 58
               

               Conread position:
               30-435
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 231
               

               Conread position:
               31-355
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               65, 91
               

               Conread position:
               36-425
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               96, 52
               

               Conread position:
               40-277
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 178
               

               Conread position:
               53-277
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 7
               

               Conread position:
               54-417
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               110, 176
               

               Conread position:
               54-425
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               42, 270
               

               Conread position:
               54-434
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 114
               

               Conread position:
               62-360
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               91, 15
               

               Conread position:
               67-277
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 32
               

               Conread position:
               91-355
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               94-301
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               56, 17
               

               Conread position:
               94-437
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               258
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               56, 118
               

               Conread position:
               102-277
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               102-355
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               47, 199
               

               Conread position:
               152-415
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               42, 52
               

               Conread position:
               153-415
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 91
               

               Conread position:
               153-451
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 147
               

               Conread position:
               154-354
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               122, 49
               

               Conread position:
               166-430
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 19
               
Show alignments to all cow chromosomes.