Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               96, 194
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               156, 53
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               94, 151
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 206
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               95, 53
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               121, 76
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 59
               

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-355
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               1-434
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 74
               

               Conread position:
               2-238
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               94, 72
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               139, 70
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 120
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               95, 27
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 208
               

               Conread position:
               2-345
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 91
               

               Conread position:
               2-353
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               2-355
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 233
               

               Conread position:
               2-373
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 74
               

               Conread position:
               2-425
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 219
               

               Conread position:
               2-433
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 70
               

               Conread position:
               3-163
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               3-238
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-241
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               3-266
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               37, 233
               

               Conread position:
               3-275
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 190
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 268
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 78
               

               Conread position:
               3-341
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               3-343
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               93, 37
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               94, 72
               

               Conread position:
               3-346
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               163, 29
               

               Conread position:
               3-346
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               146, 15
               

               Conread position:
               3-354
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 220
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 209
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               125, 26
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               146, 90
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 64
               

               Conread position:
               3-378
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               3-425
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 348
               

               Conread position:
               3-430
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 211
               

               Conread position:
               3-436
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               317
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               145, 61
               

               Conread position:
               4-268
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               123, 43
               

               Conread position:
               4-277
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               92, 21
               

               Conread position:
               4-433
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 41
               

               Conread position:
               5-435
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               6-344
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               143, 71
               

               Conread position:
               6-360
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               141, 60
               

               Conread position:
               6-437
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 57
               

               Conread position:
               7-355
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               9-356
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               157, 35
               

               Conread position:
               9-438
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               12-277
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               6, 212
               

               Conread position:
               17-430
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 24
               

               Conread position:
               20-277
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               53, 206
               

               Conread position:
               22-433
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 169
               

               Conread position:
               36-355
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               59, 109
               

               Conread position:
               36-434
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 164
               

               Conread position:
               37-434
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 159
               

               Conread position:
               42-355
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               54, 137
               

               Conread position:
               43-277
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 157
               

               Conread position:
               43-277
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               98, 50
               

               Conread position:
               46-437
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 152
               

               Conread position:
               48-355
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               54-345
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               42, 59
               

               Conread position:
               54-425
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               104, 40
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               125, 26
               

               Conread position:
               78-274
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 6
               

               Conread position:
               82-433
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               251
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               55, 245
               

               Conread position:
               85-437
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               94-355
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 155
               

               Conread position:
               127-277
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 149
               

               Conread position:
               131-439
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               143-279
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               147-431
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               44, 206
               

               Conread position:
               152-355
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               152-421
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               40, 129
               

               Conread position:
               152-437
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               153-435
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               156, 36
               

               Conread position:
               154-435
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               43, 117
               

               Conread position:
               154-437
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               157-355
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               113, 59
               

               Conread position:
               157-364
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               161-346
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               27, 67
               

               Conread position:
               164-431
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               143, 103
               

               Conread position:
               165-277
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               168-278
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               274-437
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 100
               
Show alignments to all cow chromosomes.