Cow genome map

Conread name: rgul0111_e15.y1

Conread position: 1-209
Cow position: chr28:23775814-23776035 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 96, 194

Conread position: 1-238
Cow position: chr28:10212929-10212701 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 156, 53

Conread position: 1-267
Cow position: chr28:26340105-26340377 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 94, 151

Conread position: 1-276
Cow position: chr28:10977633-10977895 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 95

Conread position: 1-277
Cow position: chr28:5684473-5684758 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 206

Conread position: 1-277
Cow position: chr28:9740240-9740521 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 95, 53

Conread position: 1-277
Cow position: chr28:16109713-16109994 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 121, 76

Conread position: 1-297
Cow position: chr28:14151003-14151298 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 59

Conread position: 1-342
Cow position: chr28:3745970-3746333 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 95, 0

Conread position: 1-355
Cow position: chr28:3024143-3023766 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 153, 93

Conread position: 1-434
Cow position: chr28:25056741-25057165 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 74

Conread position: 2-238
Cow position: chr28:3751088-3751330 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 94, 72

Conread position: 2-264
Cow position: chr28:25399659-25399914 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 139, 70

Conread position: 2-277
Cow position: chr28:7549293-7549003 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 120

Conread position: 2-277
Cow position: chr28:14997833-14998122 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 95, 27

Conread position: 2-286
Cow position: chr28:21672568-21672857 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 208

Conread position: 2-345
Cow position: chr28:16346757-16346399 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 91

Conread position: 2-353
Cow position: chr28:4070738-4071110 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 63, 92

Conread position: 2-355
Cow position: chr28:21844725-21845105 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 233

Conread position: 2-373
Cow position: chr28:6971570-6971180 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 74

Conread position: 2-425
Cow position: chr28:21868221-21868657 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 219

Conread position: 2-433
Cow position: chr28:13474075-13474507 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 70

Conread position: 3-163
Cow position: chr28:23530635-23530799 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 43

Conread position: 3-238
Cow position: chr28:7980648-7980401 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 3-241
Cow position: chr28:24646311-24646558 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 3-266
Cow position: chr28:4841626-4841349 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 37, 233

Conread position: 3-275
Cow position: chr28:2862632-2862921 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 190

Conread position: 3-276
Cow position: chr28:7751530-7751247 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 268

Conread position: 3-277
Cow position: chr28:29434654-29434373 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 78

Conread position: 3-341
Cow position: chr28:11752374-11752009 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 3-343
Cow position: chr28:7268165-7267812 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 37

Conread position: 3-345
Cow position: chr28:14649119-14649477 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 94, 72

Conread position: 3-346
Cow position: chr28:22332320-22332665 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 163, 29

Conread position: 3-346
Cow position: chr28:28163865-28164222 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 146, 15

Conread position: 3-354
Cow position: chr28:16211326-16210951 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 220

Conread position: 3-355
Cow position: chr28:9636686-9636307 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 209

Conread position: 3-355
Cow position: chr28:11423033-11422664 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 125, 26

Conread position: 3-355
Cow position: chr28:16919391-16919023 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 3-355
Cow position: chr28:20124556-20124932 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 146, 90

Conread position: 3-355
Cow position: chr28:25596403-25596774 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 64

Conread position: 3-378
Cow position: chr28:8022340-8021939 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 288
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 48

Conread position: 3-425
Cow position: chr28:9285607-9285177 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 348

Conread position: 3-430
Cow position: chr28:16204563-16204126 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 211

Conread position: 3-436
Cow position: chr28:26220032-26220491 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 317
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 145, 61

Conread position: 4-268
Cow position: chr28:10682046-10681775 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 43

Conread position: 4-277
Cow position: chr28:5128956-5128674 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 92, 21

Conread position: 4-433
Cow position: chr28:12964349-12964790 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 41

Conread position: 5-435
Cow position: chr28:24966160-24966595 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 304
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 75

Conread position: 6-344
Cow position: chr28:5203973-5204332 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 143, 71

Conread position: 6-360
Cow position: chr28:34561132-34561490 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 141, 60

Conread position: 6-437
Cow position: chr28:22371905-22371463 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 57

Conread position: 7-355
Cow position: chr28:4016304-4016677 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 22

Conread position: 9-356
Cow position: chr28:26614665-26615004 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 157, 35

Conread position: 9-438
Cow position: chr28:8787322-8787752 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 64

Conread position: 12-277
Cow position: chr28:3256572-3256853 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 6, 212

Conread position: 17-430
Cow position: chr28:33884194-33884607 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 24

Conread position: 20-277
Cow position: chr28:12946725-12947004 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 53, 206

Conread position: 22-433
Cow position: chr28:29416927-29416517 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 169

Conread position: 36-355
Cow position: chr28:4809597-4809926 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 59, 109

Conread position: 36-434
Cow position: chr28:4158755-4159173 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 164

Conread position: 37-434
Cow position: chr28:4835041-4834634 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 159

Conread position: 42-355
Cow position: chr28:30937857-30937527 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 54, 137

Conread position: 43-277
Cow position: chr28:3000784-3000553 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 157

Conread position: 43-277
Cow position: chr28:15044048-15043807 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 50

Conread position: 46-437
Cow position: chr28:11829129-11828747 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 152

Conread position: 48-355
Cow position: chr28:13290319-13290006 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 48, 25

Conread position: 54-345
Cow position: chr28:2132101-2131788 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 42, 59

Conread position: 54-425
Cow position: chr28:2961010-2960616 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 271
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 40

Conread position: 67-355
Cow position: chr28:7808511-7808781 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 26

Conread position: 78-274
Cow position: chr28:2872760-2872971 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 6

Conread position: 82-433
Cow position: chr28:24082116-24082478 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 55, 245

Conread position: 85-437
Cow position: chr28:9812135-9812495 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 41

Conread position: 94-355
Cow position: chr28:10863921-10863644 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 155

Conread position: 127-277
Cow position: chr28:16246169-16246010 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 149

Conread position: 131-439
Cow position: chr28:4181914-4182215 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 76

Conread position: 143-279
Cow position: chr28:4179478-4179608 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 147-431
Cow position: chr28:3411064-3410783 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 206

Conread position: 152-355
Cow position: chr28:22813193-22813399 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 109, 21

Conread position: 152-421
Cow position: chr28:5139064-5138803 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 40, 129

Conread position: 152-437
Cow position: chr28:10589091-10588821 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 141, 0

Conread position: 153-435
Cow position: chr28:4013020-4013293 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 156, 36

Conread position: 154-435
Cow position: chr28:25128818-25129094 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 117

Conread position: 154-437
Cow position: chr28:4823541-4823813 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 40

Conread position: 157-355
Cow position: chr28:3445545-3445329 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 59

Conread position: 157-364
Cow position: chr28:7619215-7618995 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 161-346
Cow position: chr28:12070176-12070368 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 67

Conread position: 164-431
Cow position: chr28:134126-133874 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 143, 103

Conread position: 165-277
Cow position: chr28:4438655-4438766 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 168-278
Cow position: chr28:2762142-2762251 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 274-437
Cow position: chr28:8383923-8384084 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 100

Show alignments to all cow chromosomes.