Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               134, 8
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               34, 199
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 142
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               280
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               287, 66
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               95, 43
               

               Conread position:
               2-353
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               183, 91
               

               Conread position:
               2-433
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 205
               

               Conread position:
               3-241
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 205
               

               Conread position:
               3-275
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 119
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 58
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               181, 78
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 90
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               146, 66
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 206
               

               Conread position:
               3-432
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               146, 193
               

               Conread position:
               3-433
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               94, 251
               

               Conread position:
               3-434
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 210
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 389
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               163, 53
               

               Conread position:
               3-438
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               240, 33
               

               Conread position:
               4-355
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               150, 65
               

               Conread position:
               4-429
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 109
               

               Conread position:
               5-439
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 210
               

               Conread position:
               6-276
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               121, 88
               

               Conread position:
               6-277
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               91, 55
               

               Conread position:
               6-355
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               91, 102
               

               Conread position:
               8-276
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               88, 37
               

               Conread position:
               9-430
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               303
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               9, 117
               

               Conread position:
               9-432
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 202
               

               Conread position:
               16-421
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               294
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               79, 208
               

               Conread position:
               16-445
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 136
               

               Conread position:
               17-162
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               22-316
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               69, 230
               

               Conread position:
               28-234
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               69, 83
               

               Conread position:
               28-338
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               36-433
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               167, 57
               

               Conread position:
               40-275
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               57, 145
               

               Conread position:
               40-434
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               41-432
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               55, 26
               

               Conread position:
               50-434
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               109, 27
               

               Conread position:
               51-434
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               55, 265
               

               Conread position:
               54-355
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               130, 20
               

               Conread position:
               57-277
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               59-385
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 174
               

               Conread position:
               78-286
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 141
               

               Conread position:
               92-416
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               246, 72
               

               Conread position:
               93-345
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               97-354
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               103-334
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               130-354
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               152-276
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               152-434
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               127, 172
               

               Conread position:
               152-434
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 43
               

               Conread position:
               153-417
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               122, 31
               

               Conread position:
               154-355
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 152
               

               Conread position:
               155-430
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               163, 133
               

               Conread position:
               159-354
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               159-355
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               120, 49
               

               Conread position:
               160-344
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               160-430
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               148, 135
               
Show alignments to all cow chromosomes.