Cow genome map
| Conread name: | rgul0111_e15.y1 | 
| Conread position: | 1-263 | 
| Cow position: | chr6:46245520-46245260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 95, 182 | 
| Conread position: | 1-264 | 
| Cow position: | chr6:9751238-9750977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 7, 77 | 
| Conread position: | 1-277 | 
| Cow position: | chr6:1770392-1770108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 105, 41 | 
| Conread position: | 1-277 | 
| Cow position: | chr6:48281798-48282082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 63, 93 | 
| Conread position: | 1-417 | 
| Cow position: | chr6:54132621-54133038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 40 | 
| Conread position: | 2-277 | 
| Cow position: | chr6:130361-130073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 258 | 
| Conread position: | 2-277 | 
| Cow position: | chr6:26728723-26728442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 94, 59 | 
| Conread position: | 2-355 | 
| Cow position: | chr6:4383296-4383660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 143, 73 | 
| Conread position: | 2-355 | 
| Cow position: | chr6:45690790-45690429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 176 | 
| Conread position: | 2-355 | 
| Cow position: | chr6:52478624-52478225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 2-436 | 
| Cow position: | chr6:32287424-32287877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 60, 26 | 
| Conread position: | 2-437 | 
| Cow position: | chr6:31535767-31535326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 206 | 
| Conread position: | 3-238 | 
| Cow position: | chr6:58172990-58173236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 100, 23 | 
| Conread position: | 3-240 | 
| Cow position: | chr6:60456635-60456882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 46, 106 | 
| Conread position: | 3-276 | 
| Cow position: | chr6:21231341-21231613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 78 | 
| Conread position: | 3-276 | 
| Cow position: | chr6:31525853-31526135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 94, 202 | 
| Conread position: | 3-277 | 
| Cow position: | chr6:23248158-23247876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 252 | 
| Conread position: | 3-277 | 
| Cow position: | chr6:28977224-28976950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 74 | 
| Conread position: | 3-278 | 
| Cow position: | chr6:19681719-19681434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 93, 46 | 
| Conread position: | 3-338 | 
| Cow position: | chr6:8965895-8966261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 93, 13 | 
| Conread position: | 3-344 | 
| Cow position: | chr6:32121716-32122068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 90 | 
| Conread position: | 3-345 | 
| Cow position: | chr6:222635-222289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 29, 115 | 
| Conread position: | 3-353 | 
| Cow position: | chr6:13688006-13687636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 79 | 
| Conread position: | 3-355 | 
| Cow position: | chr6:24031180-24031549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 327 | 
| Conread position: | 3-355 | 
| Cow position: | chr6:46860363-46859984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 216 | 
| Conread position: | 3-364 | 
| Cow position: | chr6:11192647-11192283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 69, 147 | 
| Conread position: | 3-387 | 
| Cow position: | chr6:8209784-8209393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 199, 91 | 
| Conread position: | 3-424 | 
| Cow position: | chr6:6400753-6401199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 396 | 
| Conread position: | 3-424 | 
| Cow position: | chr6:7128597-7128170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 39, 76 | 
| Conread position: | 3-425 | 
| Cow position: | chr6:5609635-5609207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 85 | 
| Conread position: | 3-425 | 
| Cow position: | chr6:21869840-21869393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 145, 85 | 
| Conread position: | 3-429 | 
| Cow position: | chr6:44194740-44194317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 71 | 
| Conread position: | 3-431 | 
| Cow position: | chr6:38440987-38441421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 94, 73 | 
| Conread position: | 3-432 | 
| Cow position: | chr6:15242639-15243081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 94, 44 | 
| Conread position: | 3-433 | 
| Cow position: | chr6:56849823-56850260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 94, 64 | 
| Conread position: | 3-434 | 
| Cow position: | chr6:36202633-36203065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 73 | 
| Conread position: | 3-435 | 
| Cow position: | chr6:7131066-7130616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 146, 69 | 
| Conread position: | 3-435 | 
| Cow position: | chr6:17414646-17414205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 58 | 
| Conread position: | 3-436 | 
| Cow position: | chr6:36196019-36196448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 94, 73 | 
| Conread position: | 3-437 | 
| Cow position: | chr6:51581453-51581008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 341 | 
| Conread position: | 3-437 | 
| Cow position: | chr6:53460767-53460324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 91 | 
| Conread position: | 3-438 | 
| Cow position: | chr6:53024993-53024563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 36, 98 | 
| Conread position: | 4-231 | 
| Cow position: | chr6:59277134-59276906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 93, 26 | 
| Conread position: | 4-277 | 
| Cow position: | chr6:24961951-24962235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 200 | 
| Conread position: | 4-432 | 
| Cow position: | chr6:47519852-47520296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 140 | 
| Conread position: | 4-435 | 
| Cow position: | chr6:13040259-13040698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 165 | 
| Conread position: | 4-436 | 
| Cow position: | chr6:64431745-64432179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 146, 90 | 
| Conread position: | 4-440 | 
| Cow position: | chr6:29484897-29485333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 159, 17 | 
| Conread position: | 5-277 | 
| Cow position: | chr6:38218479-38218756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 92, 72 | 
| Conread position: | 5-434 | 
| Cow position: | chr6:61269137-61269561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 85, 56 | 
| Conread position: | 5-439 | 
| Cow position: | chr6:46465635-46466070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 83 | 
| Conread position: | 6-264 | 
| Cow position: | chr6:33865286-33865040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 90, 6 | 
| Conread position: | 6-268 | 
| Cow position: | chr6:1889277-1889008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 89, 193 | 
| Conread position: | 6-276 | 
| Cow position: | chr6:9452965-9452681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 6-378 | 
| Cow position: | chr6:20098156-20097759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 160, 88 | 
| Conread position: | 6-425 | 
| Cow position: | chr6:9736835-9736410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 8, 81 | 
| Conread position: | 9-277 | 
| Cow position: | chr6:1944537-1944803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 82 | 
| Conread position: | 12-267 | 
| Cow position: | chr6:49410875-49410617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 55 | 
| Conread position: | 13-218 | 
| Cow position: | chr6:37246615-37246397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 13-268 | 
| Cow position: | chr6:35613599-35613337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 136, 81 | 
| Conread position: | 13-331 | 
| Cow position: | chr6:528462-528139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 84, 120 | 
| Conread position: | 14-436 | 
| Cow position: | chr6:15305398-15305817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 59 | 
| Conread position: | 20-268 | 
| Cow position: | chr6:1499460-1499724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 77, 208 | 
| Conread position: | 23-264 | 
| Cow position: | chr6:8125157-8125403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 104, 54 | 
| Conread position: | 28-431 | 
| Cow position: | chr6:47355654-47356067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 130, 65 | 
| Conread position: | 36-276 | 
| Cow position: | chr6:12543095-12542841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 122, 57 | 
| Conread position: | 36-431 | 
| Cow position: | chr6:15243089-15243502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 27, 174 | 
| Conread position: | 38-355 | 
| Cow position: | chr6:48112044-48112382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 124, 39 | 
| Conread position: | 39-277 | 
| Cow position: | chr6:6965542-6965308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 119, 12 | 
| Conread position: | 40-268 | 
| Cow position: | chr6:58590116-58590354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 42-277 | 
| Cow position: | chr6:61608351-61608602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 164 | 
| Conread position: | 47-355 | 
| Cow position: | chr6:58370593-58370933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 33, 20 | 
| Conread position: | 50-437 | 
| Cow position: | chr6:46283146-46282745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 43 | 
| Conread position: | 57-276 | 
| Cow position: | chr6:47833259-47833032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 38, 154 | 
| Conread position: | 70-277 | 
| Cow position: | chr6:12829354-12829135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 26, 40 | 
| Conread position: | 74-343 | 
| Cow position: | chr6:7119736-7119450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 6, 132 | 
| Conread position: | 80-315 | 
| Cow position: | chr6:50975936-50976187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 28, 115 | 
| Conread position: | 80-436 | 
| Cow position: | chr6:25615222-25614844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 15, 27 | 
| Conread position: | 90-339 | 
| Cow position: | chr6:61524310-61524040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 68, 107 | 
| Conread position: | 96-276 | 
| Cow position: | chr6:50639205-50639392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 105, 82 | 
| Conread position: | 120-345 | 
| Cow position: | chr6:23466108-23465862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 133-438 | 
| Cow position: | chr6:49437278-49437579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 24, 63 | 
| Conread position: | 151-277 | 
| Cow position: | chr6:32853152-32853277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 51, 32 | 
| Conread position: | 151-425 | 
| Cow position: | chr6:60266216-60265933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 119, 50 | 
| Conread position: | 152-432 | 
| Cow position: | chr6:18118085-18117807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 42, 104 | 
| Conread position: | 152-433 | 
| Cow position: | chr6:60468204-60468474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 115, 50 | 
| Conread position: | 152-437 | 
| Cow position: | chr6:2078853-2078569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 54, 165 | 
| Conread position: | 152-437 | 
| Cow position: | chr6:3350986-3351275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 35, 148 | 
| Conread position: | 152-442 | 
| Cow position: | chr6:22985891-22985610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 35, 170 | 
| Conread position: | 156-275 | 
| Cow position: | chr6:12197148-12197268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 156-355 | 
| Cow position: | chr6:10106010-10105794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 37, 46 | 
| Conread position: | 159-277 | 
| Cow position: | chr6:62056586-62056704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 161-425 | 
| Cow position: | chr6:50504429-50504691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 35, 143 | 
| Conread position: | 181-425 | 
| Cow position: | chr6:57320588-57320363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 126, 13 | 
| Conread position: | 188-431 | 
| Cow position: | chr6:29775623-29775859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 120, 100 | 
Show alignments to all cow chromosomes.
