Cow genome map


           Conread name:
           rgul0111_e15.y1
        

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               96, 205
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               129, 81
               

               Conread position:
               1-353
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 27
               

               Conread position:
               1-436
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               316
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               95, 194
               

               Conread position:
               2-276
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               162, 91
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               138, 41
               

               Conread position:
               2-277
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               156, 62
               

               Conread position:
               2-278
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 100
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               238, 49
               

               Conread position:
               2-425
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 75
               

               Conread position:
               2-434
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               93, 63
               

               Conread position:
               2-435
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 220
               

               Conread position:
               3-147
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               3-162
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               153, 87
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               3-241
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               93, 72
               

               Conread position:
               3-264
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               91, 51
               

               Conread position:
               3-264
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               140, 64
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               128, 90
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               144, 42
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               93, 210
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               263
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               122, 85
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               163, 69
               

               Conread position:
               3-364
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               3-381
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               284
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               147, 66
               

               Conread position:
               3-425
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 51
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               290, 90
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               302
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               94, 139
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 25
               

               Conread position:
               3-437
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               280
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               218, 73
               

               Conread position:
               3-441
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               144, 51
               

               Conread position:
               3-445
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               310
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               93, 72
               

               Conread position:
               4-345
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 201
               

               Conread position:
               4-345
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 343
               

               Conread position:
               4-410
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               91, 67
               

               Conread position:
               4-430
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 68
               

               Conread position:
               4-431
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 84
               

               Conread position:
               4-433
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               309
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               140, 13
               

               Conread position:
               5-342
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 89
               

               Conread position:
               5-436
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 53
               

               Conread position:
               5-438
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 35
               

               Conread position:
               9-277
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               145, 190
               

               Conread position:
               9-344
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 75
               

               Conread position:
               13-358
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 299
               

               Conread position:
               13-379
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               97, 64
               

               Conread position:
               14-206
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               137, 62
               

               Conread position:
               18-409
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 328
               

               Conread position:
               21-170
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 145
               

               Conread position:
               28-277
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               168, 65
               

               Conread position:
               28-277
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 61
               

               Conread position:
               28-355
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               130, 49
               

               Conread position:
               29-231
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               31-241
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               74, 44
               

               Conread position:
               36-433
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 155
               

               Conread position:
               45-265
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 146
               

               Conread position:
               46-434
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 6
               

               Conread position:
               47-292
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 58
               

               Conread position:
               51-256
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               45, 162
               

               Conread position:
               57-316
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               218, 37
               

               Conread position:
               57-433
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               39, 263
               

               Conread position:
               70-276
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               79, 20
               

               Conread position:
               71-355
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               25, 112
               

               Conread position:
               78-355
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               80-352
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               94-431
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               68, 204
               

               Conread position:
               99-274
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               103-278
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               110-344
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               113-345
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 77
               

               Conread position:
               152-355
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               127, 49
               

               Conread position:
               152-437
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               160-443
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               36, 183
               
Show alignments to all cow chromosomes.