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Cow genome map

           
Conread name:
           
rgul0112_n14.y1
        

               
Conread position:
               
1-128
               

               
Cow position:
               
chr11:64405561-64405436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-130
               

               
Cow position:
               
chr11:16795377-16795252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr11:26277315-26277190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr11:15608518-15608389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr11:62376662-62376519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr11:31885296-31885438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 46
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr11:10364421-10364259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr11:55348038-55348206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 67
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr11:84890977-84890809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr11:17192506-17192334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr11:19508073-19508243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
146, 37
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr11:2281514-2281339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr11:61846229-61846043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr11:35276076-35276258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
169, 61
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr11:53719720-53719900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:25165219-25165400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr11:74929555-74929745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
95, 62
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr11:63520548-63520745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr11:62019823-62019620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr11:4384400-4384596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr11:62045174-62045373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr11:41438449-41438244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:75748210-75748417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr11:77241149-77241353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr11:3704095-3704292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr11:21819669-21819448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
134, 60
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr11:77207824-77208038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 53
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr11:1485585-1485362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr11:8105558-8105784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr11:41577233-41577021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
154, 46
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr11:41983671-41983458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr11:47165362-47165142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
166, 61
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr11:47586570-47586351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr11:48901302-48901084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
144, 63
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr11:62965778-62965549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr11:63516599-63516826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr11:30110743-30110963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr11:41239499-41239266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
98, 67
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr11:67951186-67950969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr11:2050355-2050583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr11:2514817-2514590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr11:32609767-32610002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr11:71846573-71846346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr11:5677496-5677728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr11:17112851-17112624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr11:37068528-37068311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 46
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr11:25319826-25320063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr11:53130587-53130822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr11:73478396-73478618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr11:4412242-4412011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
151, 61
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr11:48932808-48932571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
146, 50
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:16251473-16251224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 58
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:50197669-50197413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:83196274-83196517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
139, 49
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr11:38193927-38194178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr11:38810575-38810328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr11:58614434-58614681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr11:67931719-67931462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 15
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr11:171921-171678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr11:2309649-2309897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
152, 35
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr11:70459350-70459587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
187, 43
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr11:81174665-81174908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr11:60302182-60301930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr11:18210573-18210315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr11:68570896-68570633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 21
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr11:10076551-10076803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr11:18591658-18591398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 32
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr11:27386564-27386302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr11:36113933-36114193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr11:40467348-40467089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr11:65430837-65431091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr11:42793200-42792935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr11:48697223-48697484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr11:14649537-14649273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr11:9837321-9837054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr11:51044161-51043890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr11:66897028-66896754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr11:29004211-29004479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr11:33349926-33349655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr11:6835304-6835580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr11:13190995-13191281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr11:21549271-21549527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr11:27681273-27681548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr11:30120886-30120615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr11:45872543-45872264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:866075-866338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:3726061-3726336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:3780649-3780370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:4323142-4323406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:10687112-10686839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:15503876-15504160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:18588805-18588538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:26483494-26483759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:29916313-29916589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:31226018-31225764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:32377963-32378235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:32749883-32750158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 61
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:41812136-41811867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:48672477-48672760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:56728722-56728997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:57725053-57724777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:81281720-81282005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr11:81300837-81300573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr11:62490209-62490490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr11:63518790-63519053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr11:18341263-18340985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr11:27939262-27939539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
149, 46
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr11:30764255-30764546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr11:439883-439605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr11:34616044-34616317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr11:2788155-2788452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr11:8495812-8496092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr11:19787921-19788185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
278, 40
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr11:2509520-2509245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
254, 46
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr11:3720027-3720314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr11:16262257-16261964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr11:24937437-24937727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 65
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr11:40258626-40258344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
151, 48
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr11:10620550-10620259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr11:70273076-70273375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr11:30912217-30911933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr11:51144493-51144793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
151, 48
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr11:64638748-64638443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
152, 43
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr11:81337197-81336902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr11:44642510-44642208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
179, 40
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr11:70619831-70620129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr11:3833572-3833277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr11:34830004-34829699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr11:35881687-35881997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
176, 48
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr11:36986737-36987036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr11:42044215-42043910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 61
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr11:55333684-55333996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr11:58588120-58588431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 61
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr11:69810679-69810990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 61
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr11:81162656-81162346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 41
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr11:44036491-44036809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr11:64044014-64044324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 61
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr11:80820223-80819914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr11:8840965-8840652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
284, 61
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr11:10213792-10213477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr11:17860378-17860067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr11:50778146-50778461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr11:12111692-12111364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
134, 60
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr11:50951326-50951649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr11:56821481-56821148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
104, 61
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr11:61454759-61454422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr11:76606461-76606767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr11:43646642-43646313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr11:18572579-18572898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr11:7415071-7414776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
321, 34
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr11:22499576-22499266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
319, 60
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr11:23138286-23137955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr11:47544903-47545229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr11:80564080-80564391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr11:80761604-80761279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr11:1362705-1362368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr11:30934200-30934516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr11:34032422-34032099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 46
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr11:47899052-47899368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr11:76114430-76114742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr11:30354842-30355161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr11:64090311-64089995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr11:38638896-38639215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
189, 61
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr11:45631989-45631662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 61
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr11:9221950-9221627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr11:18484384-18484084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
185, 48
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr11:22978084-22977770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr11:36799523-36799203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr11:73354278-73353956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr11:17227864-17227539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 35
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr11:49152729-49153054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr11:53147765-53147426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
107, 43
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr11:62663457-62663129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 167
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr11:65409382-65409051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr11:66041049-66041384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr11:11125439-11125769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 38
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr11:11232677-11232348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr11:29960080-29960402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 41
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr11:44636985-44636648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr11:56654322-56654662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr11:62151106-62150787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 50
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:952044-952374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:1849390-1849065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 62
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:21728492-21728174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 43
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:27405293-27404963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 61
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:30879455-30879775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:44031775-44032119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:53778388-53778724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:55761654-55761973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
152, 23
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:67600543-67600892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:70838527-70838182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:77745475-77745143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
154, 40
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr11:77750992-77750666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr11:17083522-17083202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 25
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr11:25791917-25791586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
5, 62
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr11:45898280-45897940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr11:25620620-25620281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr11:29947151-29946803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
150, 49
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr11:43897913-43898248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 61
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr11:55744249-55744577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
101, 72
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr11:36238557-36238888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 32
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr11:23232738-23232410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr11:40792918-40792593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
222, 48
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr11:62155402-62155752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr11:63482650-63482317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr11:17831452-17831110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr11:48474484-48474816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr11:49148824-49149163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
154, 46
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr11:69119075-69119407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 61
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr11:70836592-70836264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr11:78381271-78380952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:8988454-8988118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:17889951-17889615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:23251828-23251480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:28643857-28644201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:30708278-30708617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:32436104-32436446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:33341370-33341030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:33414009-33414350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:36848707-36849031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 43
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:45277381-45277038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:46748091-46747747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 61
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:68910072-68909741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:75480251-75479910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:79728898-79728554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:81138001-81138324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
146, 54
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:3282827-3283138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:7589966-7590303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 65
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:7924814-7924479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:16342466-16342110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 58
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:18086562-18086233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:21894378-21894046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:30191945-30192294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 61
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:33754124-33753795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:34962837-34963184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 60
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:43430671-43430339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 25
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:44575961-44575638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:46746410-46746755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:48271970-48272315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:54334110-54334443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:58990286-58990606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:63847625-63847959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 61
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:65157632-65157294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:67804524-67804857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:83066271-83066601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 38
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr11:83230612-83230288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr11:8525338-8525000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 61
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr11:17321433-17321766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 61
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr11:30924928-30925268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr11:58102999-58102641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr11:1625439-1625103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
174, 49
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr11:30639173-30638833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr11:52381095-52380753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr11:59463860-59463522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 60
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr11:15016821-15017178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr11:18698650-18698998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr11:30475774-30476116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr11:39115269-39115601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr11:81143783-81143420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:3393435-3393093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 21
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:11469858-11469532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:13043366-13043027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:17036777-17036411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 197
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:18707038-18706708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:19247419-19247083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 48
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:20238448-20238797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:21844360-21844018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:26117941-26117613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
145, 46
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:27248267-27248609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 41
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:27746696-27747039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:30165284-30165632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:33348409-33348073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:35154052-35153700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 49
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:36112193-36112539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:36182464-36182813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 49
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:38236019-38236374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:40818863-40818511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:41549559-41549212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
143, 58
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:43361021-43360666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 243
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:45646818-45646472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:48544218-48544557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 40
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:50153043-50152692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:52297448-52297102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:62239525-62239863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 17
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:62620160-62620497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 46
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:63065429-63065774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:64029481-64029146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:64334633-64334954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
264, 41
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:67345868-67345538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:74316481-74316827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:77758985-77758639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:83043585-83043246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr11:85723477-85723815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
2-114
               

               
Cow position:
               
chr11:75510457-75510347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-148
               

               
Cow position:
               
chr11:58600637-58600782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
2-154
               

               
Cow position:
               
chr11:37118261-37118415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr11:41598951-41598777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr11:37100583-37100379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr11:18372855-18373089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
99, 6
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr11:37292633-37292885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr11:8339628-8339369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr11:16910590-16910315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr11:10302412-10302157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr11:18526116-18525851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr11:4732115-4732390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr11:6400296-6400016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr11:17495969-17495694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr11:66733612-66733887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr11:5226965-5226672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
2-320
               

               
Cow position:
               
chr11:63469659-63469966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 57
               

               
Conread position:
               
2-321
               

               
Cow position:
               
chr11:8428271-8428603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 60
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr11:36647137-36647443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-334
               

               
Cow position:
               
chr11:19501001-19500687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr11:36194069-36194405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr11:377872-377529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr11:44234131-44234467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 34
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr11:15632783-15632455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 60
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr11:42836184-42835838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr11:53773449-53773794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr11:70484085-70483740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr11:67747058-67747391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr11:71168801-71168481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr11:6234102-6233765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr11:11534127-11533817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr11:12950173-12949831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
126, 60
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr11:56518536-56518200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 82
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr11:17278887-17278558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr11:24601747-24602088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 64
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr11:66188544-66188198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr11:81406381-81406046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
144, 57
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr11:82940841-82940505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr11:42292059-42291722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr11:59902664-59903010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
100, 86
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr11:35363272-35363439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr11:25807981-25807800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr11:59370792-59370996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr11:63157135-63156871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr11:31525642-31525926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr11:32595244-32595505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
144, 59
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr11:42003179-42002900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr11:36981345-36981621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr11:38874624-38874342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr11:31352795-31352456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr11:17660872-17661185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr11:49934964-49934626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr11:42083257-42083573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr11:2092118-2092435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 35
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr11:33310749-33311085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr11:4663261-4662939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
159, 46
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr11:77546196-77546521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
3-341
               

               
Cow position:
               
chr11:41809700-41809381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr11:42016861-42016527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr11:71868826-71868489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr11:40958-41296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 59
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr11:1486089-1485739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr11:15285840-15285496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr11:59872703-59873044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 177
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr11:68207060-68206725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 34
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr11:80923557-80923202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 253
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr11:1071314-1070971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 58
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr11:27722140-27722298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
151, 43
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr11:3998799-3998608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
93, 84
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr11:55117251-55117457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr11:35543648-35543867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr11:15989024-15989249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr11:41157417-41157177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr11:17968797-17968562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
235, 37
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr11:3175157-3175408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr11:32076363-32076091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr11:44818875-44819141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr11:83357169-83357442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
143, 58
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr11:16226484-16226749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr11:23128761-23128444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 57
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr11:65762818-65762484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 46
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr11:2925512-2925195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr11:19487697-19487358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr11:58140414-58140603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr11:36203014-36203209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr11:21621161-21621394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr11:38843343-38843581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 57
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr11:17077791-17078028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
6-211
               

               
Cow position:
               
chr11:5526794-5526589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 82
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr11:61859119-61858839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr11:26535555-26535904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
7-118
               

               
Cow position:
               
chr11:30172153-30172262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
7-176
               

               
Cow position:
               
chr11:84924317-84924147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
7-195
               

               
Cow position:
               
chr11:12316305-12316113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-195
               

               
Cow position:
               
chr11:19216165-19215973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-195
               

               
Cow position:
               
chr11:54216613-54216803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
7-203
               

               
Cow position:
               
chr11:69413269-69413074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-211
               

               
Cow position:
               
chr11:40860935-40860732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
45, 154
               

               
Conread position:
               
7-211
               

               
Cow position:
               
chr11:62749969-62749774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
7-211
               

               
Cow position:
               
chr11:62808867-62808670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr11:21830571-21830352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
150, 54
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr11:20730497-20730280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr11:35668937-35668712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr11:65857639-65857859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr11:2422198-2422421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr11:38598993-38598769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr11:15048188-15048414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr11:30433277-30433503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr11:2869368-2869138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr11:4489177-4488948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr11:43369617-43369388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr11:68631913-68631683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr11:4317068-4316837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr11:18389081-18388863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr11:21472545-21472318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr11:34278813-34279044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr11:66389284-66389053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 81
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr11:10700912-10700679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr11:24334493-24334726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr11:41040914-41040681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr11:61120525-61120758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr11:63185768-63185535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr11:68136924-68137157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr11:74389785-74390018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr11:84184512-84184745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr11:9824232-9823997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr11:23773985-23774220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr11:41422051-41421816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr11:56886396-56886161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr11:60778313-60778548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr11:66893258-66893023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr11:72050722-72050957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr11:87147486-87147251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
7-244
               

               
Cow position:
               
chr11:83767994-83768229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-250
               

               
Cow position:
               
chr11:25991696-25991454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
7-252
               

               
Cow position:
               
chr11:38071133-38071384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
7-256
               

               
Cow position:
               
chr11:6364403-6364153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-265
               

               
Cow position:
               
chr11:65079731-65079989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
7-272
               

               
Cow position:
               
chr11:77766820-77766552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr11:5197296-5197029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr11:28848195-28847933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr11:56854329-56854063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr11:84724433-84724700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
7-276
               

               
Cow position:
               
chr11:75177670-75177941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 54
               

               
Conread position:
               
7-277
               

               
Cow position:
               
chr11:28226047-28225780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
7-277
               

               
Cow position:
               
chr11:39163058-39163327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr11:6580595-6580888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr11:42884989-42884729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr11:61202944-61203223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
7-311
               

               
Cow position:
               
chr11:13040382-13040090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
7-313
               

               
Cow position:
               
chr11:5031996-5031692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr11:41271920-41272235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr11:36659031-36658714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 39
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr11:82108106-82107794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
7-341
               

               
Cow position:
               
chr11:35684716-35684390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 55
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr11:32198721-32199054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr11:35347976-35347640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr11:39462399-39462736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr11:87155296-87155633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
7-344
               

               
Cow position:
               
chr11:23385463-23385130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
7-344
               

               
Cow position:
               
chr11:59702266-59702606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr11:5433049-5433387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
174, 34
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr11:10095126-10095464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr11:10992063-10992383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr11:15772941-15772592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr11:34120979-34121319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 55
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr11:35580035-35580382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr11:83323355-83323698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
285, 27
               

               
Conread position:
               
8-194
               

               
Cow position:
               
chr11:79814934-79814743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
8-196
               

               
Cow position:
               
chr11:76206172-76206361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
139, 54
               

               
Conread position:
               
8-201
               

               
Cow position:
               
chr11:68131119-68131309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
8-202
               

               
Cow position:
               
chr11:58155871-58156062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr11:1599169-1599375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
8-241
               

               
Cow position:
               
chr11:38795238-38795470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
8-250
               

               
Cow position:
               
chr11:32431919-32432164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
8-256
               

               
Cow position:
               
chr11:23256455-23256209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 127
               

               
Conread position:
               
8-307
               

               
Cow position:
               
chr11:62880843-62880554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
8-341
               

               
Cow position:
               
chr11:20761627-20761954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr11:76369739-76369408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
8-344
               

               
Cow position:
               
chr11:84385864-84385524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 177
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr11:35723759-35724082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
8-348
               

               
Cow position:
               
chr11:18244159-18243824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
8-348
               

               
Cow position:
               
chr11:41986261-41985927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
94, 38
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr11:7444823-7445023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
9-239
               

               
Cow position:
               
chr11:39679660-39679431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
9-262
               

               
Cow position:
               
chr11:75355394-75355653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
168, 32
               

               
Conread position:
               
9-275
               

               
Cow position:
               
chr11:79985897-79986161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr11:52983474-52983757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
144, 40
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr11:64904779-64905095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
9-341
               

               
Cow position:
               
chr11:3233864-3234189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
9-343
               

               
Cow position:
               
chr11:4674667-4674331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
9-344
               

               
Cow position:
               
chr11:34145133-34144810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr11:11557952-11558292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 41
               

               
Conread position:
               
11-242
               

               
Cow position:
               
chr11:36301296-36301065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
6, 52
               

               
Conread position:
               
12-277
               

               
Cow position:
               
chr11:70114259-70114520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
13-337
               

               
Cow position:
               
chr11:23586422-23586746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 49
               

               
Conread position:
               
14-151
               

               
Cow position:
               
chr11:49396263-49396127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 52
               

               
Conread position:
               
14-187
               

               
Cow position:
               
chr11:38829000-38829168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
14-195
               

               
Cow position:
               
chr11:7574111-7574293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
14-233
               

               
Cow position:
               
chr11:17553558-17553343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
14-247
               

               
Cow position:
               
chr11:62979266-62979508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
14-261
               

               
Cow position:
               
chr11:6154200-6154440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
14-271
               

               
Cow position:
               
chr11:2811935-2811688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
14-275
               

               
Cow position:
               
chr11:7458495-7458236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
14-275
               

               
Cow position:
               
chr11:38641667-38641928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
14-276
               

               
Cow position:
               
chr11:30720886-30721145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
14-277
               

               
Cow position:
               
chr11:30295066-30295328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
14-287
               

               
Cow position:
               
chr11:33287173-33286899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
14-316
               

               
Cow position:
               
chr11:16233142-16232848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
14-339
               

               
Cow position:
               
chr11:65607905-65607579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
14-342
               

               
Cow position:
               
chr11:5485796-5486125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
14-343
               

               
Cow position:
               
chr11:46329288-46329613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
177, 17
               

               
Conread position:
               
14-344
               

               
Cow position:
               
chr11:4207101-4207427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
14-347
               

               
Cow position:
               
chr11:15467258-15467576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
132, 47
               

               
Conread position:
               
15-126
               

               
Cow position:
               
chr11:83033911-83033802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
15-200
               

               
Cow position:
               
chr11:6392216-6392028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
15-269
               

               
Cow position:
               
chr11:7538854-7538599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
15-285
               

               
Cow position:
               
chr11:28367491-28367766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
15-297
               

               
Cow position:
               
chr11:36286488-36286763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
15-341
               

               
Cow position:
               
chr11:15373638-15373951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
16-225
               

               
Cow position:
               
chr11:71455578-71455788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
77, 46
               

               
Conread position:
               
16-289
               

               
Cow position:
               
chr11:36766452-36766707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
16-316
               

               
Cow position:
               
chr11:63434268-63433973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
137, 46
               

               
Conread position:
               
16-343
               

               
Cow position:
               
chr11:47639242-47638912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
16-344
               

               
Cow position:
               
chr11:61958959-61958630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 50
               

               
Conread position:
               
16-348
               

               
Cow position:
               
chr11:2907731-2907410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 46
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr11:36672259-36672039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
17-245
               

               
Cow position:
               
chr11:37347265-37347494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
17-328
               

               
Cow position:
               
chr11:16843214-16842888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
18-341
               

               
Cow position:
               
chr11:71493068-71492750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
18-344
               

               
Cow position:
               
chr11:72375896-72375561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
19-287
               

               
Cow position:
               
chr11:9463622-9463893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
19-315
               

               
Cow position:
               
chr11:58400056-58400334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
19-348
               

               
Cow position:
               
chr11:259387-259055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 180
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr11:27932061-27932387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
22-339
               

               
Cow position:
               
chr11:24438431-24438111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
22-348
               

               
Cow position:
               
chr11:38334311-38334643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
23-339
               

               
Cow position:
               
chr11:19592200-19591885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
23-344
               

               
Cow position:
               
chr11:70609585-70609913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
24-339
               

               
Cow position:
               
chr11:14470169-14470475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
154, 40
               

               
Conread position:
               
24-348
               

               
Cow position:
               
chr11:63202443-63202126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
26-344
               

               
Cow position:
               
chr11:48649778-48650085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
26-344
               

               
Cow position:
               
chr11:70601023-70600714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
28-207
               

               
Cow position:
               
chr11:33364144-33364321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
28-288
               

               
Cow position:
               
chr11:49231676-49231932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
28-342
               

               
Cow position:
               
chr11:6245116-6245430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 148
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr11:68912945-68913255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
28-344
               

               
Cow position:
               
chr11:66425085-66424765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
28-348
               

               
Cow position:
               
chr11:15338877-15339181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
28-348
               

               
Cow position:
               
chr11:34113065-34113383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
29-342
               

               
Cow position:
               
chr11:41215547-41215845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
29-343
               

               
Cow position:
               
chr11:27764956-27765268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
30-239
               

               
Cow position:
               
chr11:7333917-7333710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
30-329
               

               
Cow position:
               
chr11:83397701-83398005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
46, 165
               

               
Conread position:
               
30-348
               

               
Cow position:
               
chr11:55052686-55052988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
31-239
               

               
Cow position:
               
chr11:5088043-5087836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
31-287
               

               
Cow position:
               
chr11:3702753-3703008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
32-289
               

               
Cow position:
               
chr11:5075416-5075168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
32-343
               

               
Cow position:
               
chr11:2874192-2874512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
33-272
               

               
Cow position:
               
chr11:955170-955411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
119, 29
               

               
Conread position:
               
34-144
               

               
Cow position:
               
chr11:79019717-79019609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
34-285
               

               
Cow position:
               
chr11:41176149-41175893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
34-342
               

               
Cow position:
               
chr11:77128468-77128775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
143, 28
               

               
Conread position:
               
34-344
               

               
Cow position:
               
chr11:13592542-13592850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
35-261
               

               
Cow position:
               
chr11:8936679-8936463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 28
               

               
Conread position:
               
35-277
               

               
Cow position:
               
chr11:20684770-20684524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
36-268
               

               
Cow position:
               
chr11:48042233-48041994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
36-338
               

               
Cow position:
               
chr11:27913080-27913393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
36-344
               

               
Cow position:
               
chr11:25386871-25387184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
36-344
               

               
Cow position:
               
chr11:73924753-73924446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
36-348
               

               
Cow position:
               
chr11:13499820-13500135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
37-348
               

               
Cow position:
               
chr11:23272193-23271884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 94
               

               
Conread position:
               
37-349
               

               
Cow position:
               
chr11:80530173-80530478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
38-340
               

               
Cow position:
               
chr11:68841014-68841316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
39-224
               

               
Cow position:
               
chr11:81614828-81614645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
39-297
               

               
Cow position:
               
chr11:48383340-48383588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
39-319
               

               
Cow position:
               
chr11:35874181-35873913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 23
               

               
Conread position:
               
39-335
               

               
Cow position:
               
chr11:2917775-2917481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
39-337
               

               
Cow position:
               
chr11:71501318-71501024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
39-341
               

               
Cow position:
               
chr11:34646402-34646701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
39-343
               

               
Cow position:
               
chr11:77705570-77705862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
40-219
               

               
Cow position:
               
chr11:35148969-35149151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 143
               

               
Conread position:
               
40-249
               

               
Cow position:
               
chr11:41134255-41134046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
40-320
               

               
Cow position:
               
chr11:13061418-13061144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 22
               

               
Conread position:
               
42-289
               

               
Cow position:
               
chr11:69402434-69402189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
42-345
               

               
Cow position:
               
chr11:70278296-70277997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 30
               

               
Conread position:
               
43-330
               

               
Cow position:
               
chr11:1157459-1157746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
44-211
               

               
Cow position:
               
chr11:47850842-47851008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
98, 18
               

               
Conread position:
               
44-300
               

               
Cow position:
               
chr11:82796470-82796218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
45-344
               

               
Cow position:
               
chr11:16907227-16906936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
45-344
               

               
Cow position:
               
chr11:30954815-30955115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
45-348
               

               
Cow position:
               
chr11:2932969-2933265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
46-342
               

               
Cow position:
               
chr11:40573516-40573223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
47-275
               

               
Cow position:
               
chr11:30596806-30597039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
47-285
               

               
Cow position:
               
chr11:81611588-81611824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
47-337
               

               
Cow position:
               
chr11:26845762-26845487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 15
               

               
Conread position:
               
48-328
               

               
Cow position:
               
chr11:70086142-70086431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 236
               

               
Conread position:
               
48-343
               

               
Cow position:
               
chr11:68112443-68112147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
50-290
               

               
Cow position:
               
chr11:77682988-77683233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
50-333
               

               
Cow position:
               
chr11:71341630-71341361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
50-339
               

               
Cow position:
               
chr11:9270906-9270619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
50-343
               

               
Cow position:
               
chr11:83687606-83687320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
51-248
               

               
Cow position:
               
chr11:59156056-59155859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
51-270
               

               
Cow position:
               
chr11:67136619-67136390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
51-294
               

               
Cow position:
               
chr11:33468535-33468773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
51-298
               

               
Cow position:
               
chr11:60143476-60143233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
51-313
               

               
Cow position:
               
chr11:8148076-8147815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
111, 64
               

               
Conread position:
               
51-315
               

               
Cow position:
               
chr11:5287-5549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
51-337
               

               
Cow position:
               
chr11:47004171-47004453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
51-342
               

               
Cow position:
               
chr11:7873970-7874251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
51-343
               

               
Cow position:
               
chr11:37804734-37804440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
51-344
               

               
Cow position:
               
chr11:62225810-62226104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
51-344
               

               
Cow position:
               
chr11:65826918-65826636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr11:26144275-26143988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
54-348
               

               
Cow position:
               
chr11:30830792-30830497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 287
               

               
Conread position:
               
55-277
               

               
Cow position:
               
chr11:7394966-7395181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
55-344
               

               
Cow position:
               
chr11:45282752-45283043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
57-261
               

               
Cow position:
               
chr11:21428167-21427961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
57-310
               

               
Cow position:
               
chr11:67550547-67550296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
59-344
               

               
Cow position:
               
chr11:42358948-42359233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
59-348
               

               
Cow position:
               
chr11:53462773-53463063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
60-337
               

               
Cow position:
               
chr11:40479025-40478745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
33, 118
               

               
Conread position:
               
61-264
               

               
Cow position:
               
chr11:30543448-30543654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
61-344
               

               
Cow position:
               
chr11:83925876-83926157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 124
               

               
Conread position:
               
62-343
               

               
Cow position:
               
chr11:1380513-1380789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
62-348
               

               
Cow position:
               
chr11:45619181-45619471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
62-348
               

               
Cow position:
               
chr11:80556052-80556339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
63-262
               

               
Cow position:
               
chr11:85986338-85986140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
63-277
               

               
Cow position:
               
chr11:74380027-74380237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
63-289
               

               
Cow position:
               
chr11:7497813-7497587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
63-292
               

               
Cow position:
               
chr11:53511914-53512145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 178
               

               
Conread position:
               
63-314
               

               
Cow position:
               
chr11:21438048-21438293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
88, 116
               

               
Conread position:
               
63-316
               

               
Cow position:
               
chr11:16540695-16540949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
63-325
               

               
Cow position:
               
chr11:18144979-18144721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
63-328
               

               
Cow position:
               
chr11:2083969-2084242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
63-328
               

               
Cow position:
               
chr11:8545180-8544919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
63-328
               

               
Cow position:
               
chr11:75874919-75874657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 89
               

               
Conread position:
               
63-329
               

               
Cow position:
               
chr11:71008968-71009224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
63-335
               

               
Cow position:
               
chr11:63909825-63909561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
63-341
               

               
Cow position:
               
chr11:76889881-76890157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr11:77319245-77319533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
63-349
               

               
Cow position:
               
chr11:39118591-39118875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 24
               

               
Conread position:
               
64-270
               

               
Cow position:
               
chr11:56349182-56348982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
64-348
               

               
Cow position:
               
chr11:81135328-81135048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
65-338
               

               
Cow position:
               
chr11:85294081-85294350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
190, 112
               

               
Conread position:
               
67-199
               

               
Cow position:
               
chr11:35258264-35258128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
67-344
               

               
Cow position:
               
chr11:63917628-63917362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
67-348
               

               
Cow position:
               
chr11:48295869-48296149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 179
               

               
Conread position:
               
68-211
               

               
Cow position:
               
chr11:43914049-43914197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
68-289
               

               
Cow position:
               
chr11:11646907-11647132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
79, 142
               

               
Conread position:
               
68-290
               

               
Cow position:
               
chr11:80756946-80756720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 124
               

               
Conread position:
               
68-324
               

               
Cow position:
               
chr11:73512594-73512348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr11:77118546-77118799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
68-335
               

               
Cow position:
               
chr11:42296780-42296514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
68-343
               

               
Cow position:
               
chr11:32693634-32693371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
68-348
               

               
Cow position:
               
chr11:17493316-17493605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 244
               

               
Conread position:
               
68-348
               

               
Cow position:
               
chr11:56187457-56187728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
104, 164
               

               
Conread position:
               
69-268
               

               
Cow position:
               
chr11:57170990-57170791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
69-277
               

               
Cow position:
               
chr11:59862051-59862255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
69-325
               

               
Cow position:
               
chr11:32439113-32438855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
70-276
               

               
Cow position:
               
chr11:61427446-61427641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
70-337
               

               
Cow position:
               
chr11:20602067-20602334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
70-348
               

               
Cow position:
               
chr11:45434926-45435200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
71-309
               

               
Cow position:
               
chr11:35775179-35775417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 124
               

               
Conread position:
               
71-332
               

               
Cow position:
               
chr11:2576063-2575799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 93
               

               
Conread position:
               
71-337
               

               
Cow position:
               
chr11:71390723-71390458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 209
               

               
Conread position:
               
71-348
               

               
Cow position:
               
chr11:3175531-3175792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
72-344
               

               
Cow position:
               
chr11:6202288-6202557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
81, 108
               

               
Conread position:
               
73-319
               

               
Cow position:
               
chr11:53553079-53553305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
73-324
               

               
Cow position:
               
chr11:21852461-21852207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
73-327
               

               
Cow position:
               
chr11:13075948-13075714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
73-336
               

               
Cow position:
               
chr11:46580198-46580460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 209
               

               
Conread position:
               
73-337
               

               
Cow position:
               
chr11:28993889-28993632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
73-338
               

               
Cow position:
               
chr11:51729131-51729395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
73-341
               

               
Cow position:
               
chr11:55494522-55494789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 255
               

               
Conread position:
               
73-344
               

               
Cow position:
               
chr11:50072793-50073052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
73-345
               

               
Cow position:
               
chr11:48496744-48496477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
73-347
               

               
Cow position:
               
chr11:39499201-39499475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
74-341
               

               
Cow position:
               
chr11:44222734-44222996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
74-344
               

               
Cow position:
               
chr11:32126454-32126724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
28, 85
               

               
Conread position:
               
75-224
               

               
Cow position:
               
chr11:70741131-70740982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 106
               

               
Conread position:
               
75-341
               

               
Cow position:
               
chr11:5201805-5201541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
75-343
               

               
Cow position:
               
chr11:63435362-63435634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
78-333
               

               
Cow position:
               
chr11:48306496-48306243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
78-341
               

               
Cow position:
               
chr11:18851766-18852017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
79-285
               

               
Cow position:
               
chr11:40794505-40794296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
81-240
               

               
Cow position:
               
chr11:65435704-65435865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
81-271
               

               
Cow position:
               
chr11:21422087-21421895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
81-324
               

               
Cow position:
               
chr11:86720561-86720323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
81-339
               

               
Cow position:
               
chr11:45742232-45742483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
81-341
               

               
Cow position:
               
chr11:4653126-4652861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
81-342
               

               
Cow position:
               
chr11:84228863-84228606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
81-344
               

               
Cow position:
               
chr11:6633562-6633825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
81-346
               

               
Cow position:
               
chr11:70250776-70251035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
174, 50
               

               
Conread position:
               
82-227
               

               
Cow position:
               
chr11:81340646-81340507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
82-316
               

               
Cow position:
               
chr11:67246644-67246872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 108
               

               
Conread position:
               
82-339
               

               
Cow position:
               
chr11:32254367-32254108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
83-259
               

               
Cow position:
               
chr11:85703558-85703732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
84-251
               

               
Cow position:
               
chr11:33825037-33824866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
84-347
               

               
Cow position:
               
chr11:49057256-49057511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
67, 154
               

               
Conread position:
               
84-348
               

               
Cow position:
               
chr11:23407315-23407581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 250
               

               
Conread position:
               
85-347
               

               
Cow position:
               
chr11:7460763-7460498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
88-324
               

               
Cow position:
               
chr11:65767055-65767294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
89-344
               

               
Cow position:
               
chr11:69075767-69076025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
90-348
               

               
Cow position:
               
chr11:63999230-63998969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
91-346
               

               
Cow position:
               
chr11:67615382-67615130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
91-348
               

               
Cow position:
               
chr11:40395298-40395557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 244
               

               
Conread position:
               
91-348
               

               
Cow position:
               
chr11:42066721-42066985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
91-348
               

               
Cow position:
               
chr11:47772531-47772275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 37
               

               
Conread position:
               
91-348
               

               
Cow position:
               
chr11:69977838-69978089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
92-342
               

               
Cow position:
               
chr11:48659793-48660047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
92-348
               

               
Cow position:
               
chr11:52690661-52690403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 169
               

               
Conread position:
               
92-348
               

               
Cow position:
               
chr11:70206184-70206436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
94-341
               

               
Cow position:
               
chr11:261399-261156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 82
               

               
Conread position:
               
94-348
               

               
Cow position:
               
chr11:70978863-70978617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
244, 52
               

               
Conread position:
               
95-277
               

               
Cow position:
               
chr11:76652887-76653067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
95-316
               

               
Cow position:
               
chr11:46952814-46953034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 59
               

               
Conread position:
               
95-316
               

               
Cow position:
               
chr11:80537351-80537573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
95-343
               

               
Cow position:
               
chr11:13864233-13863990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
204, 55
               

               
Conread position:
               
95-343
               

               
Cow position:
               
chr11:59024489-59024247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 118
               

               
Conread position:
               
95-344
               

               
Cow position:
               
chr11:69307365-69307628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
95-348
               

               
Cow position:
               
chr11:62788993-62789248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 247
               

               
Conread position:
               
96-331
               

               
Cow position:
               
chr11:249615-249380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
97-338
               

               
Cow position:
               
chr11:71807704-71807458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 128
               

               
Conread position:
               
97-343
               

               
Cow position:
               
chr11:81168164-81167919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
97-344
               

               
Cow position:
               
chr11:70756348-70756593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
97-346
               

               
Cow position:
               
chr11:62742766-62742529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
99-285
               

               
Cow position:
               
chr11:21497390-21497578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 83
               

               
Conread position:
               
100-277
               

               
Cow position:
               
chr11:29308452-29308628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
100-325
               

               
Cow position:
               
chr11:485761-485533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
100-332
               

               
Cow position:
               
chr11:64868145-64867917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
100-348
               

               
Cow position:
               
chr11:67615059-67614804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 235
               

               
Conread position:
               
101-316
               

               
Cow position:
               
chr11:46592337-46592549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
101-328
               

               
Cow position:
               
chr11:49873017-49872789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
101-348
               

               
Cow position:
               
chr11:28395340-28395598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
103-335
               

               
Cow position:
               
chr11:40608724-40608489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 157
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr11:6194079-6194301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
105-349
               

               
Cow position:
               
chr11:26275083-26274843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
106-334
               

               
Cow position:
               
chr11:27719447-27719225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
106-343
               

               
Cow position:
               
chr11:13940067-13940300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
106-344
               

               
Cow position:
               
chr11:41293943-41293703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
106-348
               

               
Cow position:
               
chr11:83032559-83032798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
107-335
               

               
Cow position:
               
chr11:33345320-33345551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
107-336
               

               
Cow position:
               
chr11:372818-372604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
108-333
               

               
Cow position:
               
chr11:14466610-14466383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 6
               

               
Conread position:
               
108-333
               

               
Cow position:
               
chr11:31506722-31506952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 225
               

               
Conread position:
               
108-343
               

               
Cow position:
               
chr11:53510620-53510389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
108-344
               

               
Cow position:
               
chr11:3739831-3740073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
109-348
               

               
Cow position:
               
chr11:63920170-63919935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
110-314
               

               
Cow position:
               
chr11:84490610-84490415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
110-339
               

               
Cow position:
               
chr11:72333472-72333698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
111-336
               

               
Cow position:
               
chr11:375335-375566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 159
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr11:47837201-47837427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr11:39060715-39060486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
117-343
               

               
Cow position:
               
chr11:31874979-31875206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
119-240
               

               
Cow position:
               
chr11:78202924-78203047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
119-348
               

               
Cow position:
               
chr11:18910988-18910763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
120-342
               

               
Cow position:
               
chr11:31227858-31228075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
120-342
               

               
Cow position:
               
chr11:72884694-72884484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
120-343
               

               
Cow position:
               
chr11:29659452-29659674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
123-299
               

               
Cow position:
               
chr11:75965757-75965582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
123-336
               

               
Cow position:
               
chr11:83033344-83033133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
123-337
               

               
Cow position:
               
chr11:6194300-6194504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
123-341
               

               
Cow position:
               
chr11:46998877-46999090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
125-348
               

               
Cow position:
               
chr11:30493893-30494112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
125-348
               

               
Cow position:
               
chr11:35536483-35536705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
126-315
               

               
Cow position:
               
chr11:63687717-63687534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
127-343
               

               
Cow position:
               
chr11:16314769-16314986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
128-346
               

               
Cow position:
               
chr11:46922999-46922768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
128-348
               

               
Cow position:
               
chr11:63866754-63866540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
164, 17
               

               
Conread position:
               
128-348
               

               
Cow position:
               
chr11:80413114-80412888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
134-348
               

               
Cow position:
               
chr11:62813046-62812831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
135-348
               

               
Cow position:
               
chr11:42160156-42159939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
135-348
               

               
Cow position:
               
chr11:55911730-55911526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
138-347
               

               
Cow position:
               
chr11:67312680-67312898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
139-290
               

               
Cow position:
               
chr11:69392472-69392623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-326
               

               
Cow position:
               
chr11:64406136-64406324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
31, 181
               

               
Conread position:
               
139-333
               

               
Cow position:
               
chr11:41603779-41603583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
38, 160
               

               
Conread position:
               
139-343
               

               
Cow position:
               
chr11:35803044-35803250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
139-344
               

               
Cow position:
               
chr11:4199183-4199385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
157, 39
               

               
Conread position:
               
139-345
               

               
Cow position:
               
chr11:7013833-7013631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
139-346
               

               
Cow position:
               
chr11:17676460-17676256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
140-285
               

               
Cow position:
               
chr11:54218628-54218770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr11:32398546-32398729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
141-323
               

               
Cow position:
               
chr11:33409348-33409168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
141-348
               

               
Cow position:
               
chr11:48085828-48086039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
142-316
               

               
Cow position:
               
chr11:4430214-4430049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
142-348
               

               
Cow position:
               
chr11:19946347-19946548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 160
               

               
Conread position:
               
144-348
               

               
Cow position:
               
chr11:2344169-2344373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
145-344
               

               
Cow position:
               
chr11:17721888-17721686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
145-344
               

               
Cow position:
               
chr11:48248301-48248099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
146-267
               

               
Cow position:
               
chr11:37369598-37369718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
146-272
               

               
Cow position:
               
chr11:1779412-1779286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
146-288
               

               
Cow position:
               
chr11:11045116-11044974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
146-324
               

               
Cow position:
               
chr11:53279797-53279620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
30, 102
               

               
Conread position:
               
146-329
               

               
Cow position:
               
chr11:24599472-24599289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
146-335
               

               
Cow position:
               
chr11:1067525-1067334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 147
               

               
Conread position:
               
146-335
               

               
Cow position:
               
chr11:47724820-47725002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
146-340
               

               
Cow position:
               
chr11:41313739-41313544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
172, 41
               

               
Conread position:
               
146-343
               

               
Cow position:
               
chr11:8437772-8437577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
175, 32
               

               
Conread position:
               
146-347
               

               
Cow position:
               
chr11:84890803-84890600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 132
               

               
Conread position:
               
146-348
               

               
Cow position:
               
chr11:30370025-30370223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
147-291
               

               
Cow position:
               
chr11:36914802-36914665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
147-319
               

               
Cow position:
               
chr11:82740426-82740599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
147-344
               

               
Cow position:
               
chr11:72292461-72292667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 177
               

               
Conread position:
               
148-341
               

               
Cow position:
               
chr11:28168505-28168311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
149-348
               

               
Cow position:
               
chr11:31410963-31410759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
152-328
               

               
Cow position:
               
chr11:30867104-30867282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
152-344
               

               
Cow position:
               
chr11:70825874-70826063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
152-345
               

               
Cow position:
               
chr11:36920656-36920458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
152-348
               

               
Cow position:
               
chr11:4637250-4637054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
26, 164
               

               
Conread position:
               
155-329
               

               
Cow position:
               
chr11:51196152-51195983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
155-348
               

               
Cow position:
               
chr11:64104923-64105114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
157-328
               

               
Cow position:
               
chr11:30483845-30484019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
158-336
               

               
Cow position:
               
chr11:3790764-3790949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
159-319
               

               
Cow position:
               
chr11:10363458-10363297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
161-341
               

               
Cow position:
               
chr11:79019128-79018947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
162-281
               

               
Cow position:
               
chr11:13029331-13029214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
162-344
               

               
Cow position:
               
chr11:29699768-29699582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
162-344
               

               
Cow position:
               
chr11:31885650-31885836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
163-344
               

               
Cow position:
               
chr11:19606512-19606693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
166, 19
               

               
Conread position:
               
165-344
               

               
Cow position:
               
chr11:25119997-25119819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
166-345
               

               
Cow position:
               
chr11:1932556-1932373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
168-341
               

               
Cow position:
               
chr11:22747390-22747219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
169-321
               

               
Cow position:
               
chr11:69652841-69652690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
170-344
               

               
Cow position:
               
chr11:30964287-30964458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
171-336
               

               
Cow position:
               
chr11:36329091-36328931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
171-337
               

               
Cow position:
               
chr11:34413397-34413232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
171-342
               

               
Cow position:
               
chr11:15369328-15369500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
172-336
               

               
Cow position:
               
chr11:62609547-62609711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
172-347
               

               
Cow position:
               
chr11:18447548-18447373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
149, 15
               

               
Conread position:
               
174-339
               

               
Cow position:
               
chr11:54573108-54573271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
174-348
               

               
Cow position:
               
chr11:11523521-11523336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
175-316
               

               
Cow position:
               
chr11:35246366-35246508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
175-337
               

               
Cow position:
               
chr11:49255353-49255506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
176-346
               

               
Cow position:
               
chr11:39620092-39619933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
176-348
               

               
Cow position:
               
chr11:39249919-39250087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
177-344
               

               
Cow position:
               
chr11:15382555-15382388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
178-337
               

               
Cow position:
               
chr11:897622-897782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
180-343
               

               
Cow position:
               
chr11:26633061-26632900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
181-291
               

               
Cow position:
               
chr11:42452980-42452874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
181-337
               

               
Cow position:
               
chr11:84977407-84977251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 146
               

               
Conread position:
               
181-348
               

               
Cow position:
               
chr11:71854327-71854163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
159, 110
               

               
Conread position:
               
182-316
               

               
Cow position:
               
chr11:76822133-76822002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
182-337
               

               
Cow position:
               
chr11:80639597-80639439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
182-344
               

               
Cow position:
               
chr11:30888330-30888165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
182-345
               

               
Cow position:
               
chr11:5249574-5249414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
183-327
               

               
Cow position:
               
chr11:57491526-57491386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
183-341
               

               
Cow position:
               
chr11:62376519-62376362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
183-348
               

               
Cow position:
               
chr11:30172263-30172420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
183-348
               

               
Cow position:
               
chr11:35669998-35669836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
184-335
               

               
Cow position:
               
chr11:20205897-20205746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
184-342
               

               
Cow position:
               
chr11:34692808-34692968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
184-348
               

               
Cow position:
               
chr11:4225052-4225209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
184-348
               

               
Cow position:
               
chr11:38211600-38211762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
185-332
               

               
Cow position:
               
chr11:29786544-29786395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
185-335
               

               
Cow position:
               
chr11:48063845-48063695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-343
               

               
Cow position:
               
chr11:62889938-62889780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
185-344
               

               
Cow position:
               
chr11:56290467-56290626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
187-316
               

               
Cow position:
               
chr11:16801994-16801870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
187-334
               

               
Cow position:
               
chr11:71345366-71345219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
187-342
               

               
Cow position:
               
chr11:34467529-34467679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
188-338
               

               
Cow position:
               
chr11:32691013-32690862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
188-348
               

               
Cow position:
               
chr11:21885792-21885954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
148, 82
               

               
Conread position:
               
191-336
               

               
Cow position:
               
chr11:47882765-47882911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
192-324
               

               
Cow position:
               
chr11:3248746-3248612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
192-346
               

               
Cow position:
               
chr11:30895040-30894884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
136, 14
               

               
Conread position:
               
195-335
               

               
Cow position:
               
chr11:53717841-53717701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
195-343
               

               
Cow position:
               
chr11:58173591-58173738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
195-343
               

               
Cow position:
               
chr11:58938779-58938629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
195-344
               

               
Cow position:
               
chr11:18608272-18608122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
196-347
               

               
Cow position:
               
chr11:3896732-3896578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
197-348
               

               
Cow position:
               
chr11:65803903-65803749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
199-344
               

               
Cow position:
               
chr11:71021970-71022113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
200-340
               

               
Cow position:
               
chr11:17638564-17638424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
201-341
               

               
Cow position:
               
chr11:2900749-2900609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
201-348
               

               
Cow position:
               
chr11:30843047-30842903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
203-346
               

               
Cow position:
               
chr11:63165673-63165530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
205-343
               

               
Cow position:
               
chr11:84764012-84764146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
209-344
               

               
Cow position:
               
chr11:8107424-8107559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 55
               

               
Conread position:
               
210-329
               

               
Cow position:
               
chr11:64058363-64058244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
210-342
               

               
Cow position:
               
chr11:15682999-15682867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
212-349
               

               
Cow position:
               
chr11:48315414-48315277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
215-346
               

               
Cow position:
               
chr11:9699259-9699128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
216-348
               

               
Cow position:
               
chr11:30986628-30986757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
220-329
               

               
Cow position:
               
chr11:34238580-34238471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
221-337
               

               
Cow position:
               
chr11:22884405-22884518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
229-328
               

               
Cow position:
               
chr11:25320185-25320284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
229-344
               

               
Cow position:
               
chr11:31326006-31326121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-347
               

               
Cow position:
               
chr11:42206422-42206539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
238-348
               

               
Cow position:
               
chr11:80296844-80296735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
242-348
               

               
Cow position:
               
chr11:4411856-4411752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               
Show alignments to all cow chromosomes.