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Cow genome map

           
Conread name:
           
rgul0112_n14.y1
        

               
Conread position:
               
1-150
               

               
Cow position:
               
chr13:14927430-14927283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr13:15740260-15740111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr13:60393508-60393669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 46
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr13:60690531-60690704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr13:50823362-50823531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr13:54331210-54331039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:5079034-5079205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
150, 14
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr13:34556142-34556319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 55
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr13:6945564-6945376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr13:3003638-3003448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr13:46458813-46458627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr13:49283151-49283347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr13:22276975-22277169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr13:15172216-15172422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr13:37516945-37517145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr13:25248952-25249167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr13:11147497-11147292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr13:9884959-9884756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
155, 61
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:21210053-21209853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:52858772-52858565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:16155526-16155730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
107, 61
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:562947-563164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:3701624-3701412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:52199280-52199060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
146, 35
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr13:34052410-34052618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr13:20863827-20864046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
146, 6
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:20041770-20042001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:54093931-54093714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
106, 46
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr13:5091470-5091702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr13:18215617-18215407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
169, 37
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr13:12682350-12682584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr13:61170524-61170757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr13:26098336-26098119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr13:33517733-33517966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr13:7010660-7010425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
139, 61
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr13:1011523-1011289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr13:17886692-17886458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr13:17815962-17815729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr13:1780024-1779777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr13:19178467-19178220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr13:37521189-37521432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr13:30693892-30693655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr13:2192899-2192649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:2463038-2463301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr13:21155298-21155569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr13:38012552-38012294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr13:19426507-19426768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
142, 33
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:24376681-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:49805166-49804903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:55295434-55295698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
147, 42
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr13:21039407-21039675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr13:34508067-34507808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr13:47863509-47863782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
122, 64
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr13:54080613-54080894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr13:58043820-58043549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:19023648-19023928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:30651366-30651108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
146, 27
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:31808703-31808441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:33875853-33875595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 48
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:40652124-40651854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:44626571-44626288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:45604227-45604496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:51014989-51015258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:52227909-52228180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:60341005-60340726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr13:26383040-26383319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr13:25062601-25062327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 61
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr13:61166267-61166536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr13:42114212-42113931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr13:53195101-53195370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 43
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:7032482-7032202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:20605928-20606207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:34035559-34035277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:42860379-42860660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
146, 65
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr13:34941465-34941741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:4464198-4463920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:6759598-6759881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 67
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:52879603-52879310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr13:11954922-11955210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
150, 40
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr13:15234103-15233833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr13:20814089-20814364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 5
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr13:20816504-20816229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 5
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr13:25531597-25531884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr13:17613537-17613243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr13:20649792-20650089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
147, 72
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr13:29631049-29630754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr13:8201295-8201591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
225, 48
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr13:18244047-18243754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr13:889988-890288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 40
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr13:15884822-15885138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 61
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr13:17622475-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:12614451-12614135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:311621-311319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
144, 34
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:6060816-6061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:8652246-8652561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:15974801-15974498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:37484079-37484398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 61
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr13:12202556-12202240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 40
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr13:18835377-18835082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr13:24280437-24280134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr13:57493992-57494312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:43139034-43139338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr13:47356818-47356527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr13:10928799-10929115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 61
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr13:15167014-15166691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 61
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr13:28683550-28683235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
177, 45
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr13:34995135-34995456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr13:43194366-43194042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
179, 57
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr13:59170848-59170526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr13:54094997-54094680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
139, 46
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr13:10845784-10845475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
162, 57
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr13:9643691-9644023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr13:13501428-13501748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr13:40722518-40722839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr13:48037811-48037491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 35
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr13:36877263-36876927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr13:52285007-52284683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr13:54344967-54344647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr13:17821068-17821405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr13:22085560-22085881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr13:38277946-38278282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
139, 48
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr13:9593698-9593370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr13:11767851-11768181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr13:17745430-17745111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 30
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr13:34261423-34261094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 48
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr13:12990037-12989713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr13:547679-547356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr13:9974877-9975215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
82, 61
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr13:39952221-39952553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr13:8362555-8362883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr13:11096363-11096042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr13:18852267-18851941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 55
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr13:21235494-21235809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr13:26369717-26369384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
102, 48
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr13:37804070-37803751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 18
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr13:46181980-46181651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr13:43184682-43185021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr13:24369775-24369440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr13:25926983-25926648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr13:37985559-37985886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
86, 61
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr13:57475225-57475561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr13:60974269-60973938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr13:20563188-20562850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
102, 40
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr13:47007545-47007858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:6086709-6087036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:8609356-8609691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:9142475-9142137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:13465599-13465910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:16014998-16014667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
246, 43
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:20683931-20684275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 6
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:44323093-44322758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 60
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:56148732-56148377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:56154970-56155295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:56160235-56160590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:1042765-1043107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:32017331-32017655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:34263182-34263520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 40
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:37521541-37521887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:60966955-60966624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:3315483-3315821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:6616557-6616905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:9587392-9587727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:12546714-12547054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:12670254-12670597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:14544313-14543989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
130, 67
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:19223840-19223509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
145, 67
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:21276046-21275713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:21287899-21288233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 49
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:32283318-32282982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:34728646-34728985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:35526026-35526341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:35659944-35659613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:37069540-37069199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 48
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:37592747-37593093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:45353237-45352885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:51528255-51528588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:12448797-12449133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:12925982-12925630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
133, 67
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:17114189-17114524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 6
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:17439575-17439915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 61
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:17800263-17799928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:17970843-17971176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:19022469-19022125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:20679536-20679192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 34
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:21283515-21283851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 61
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:23166905-23167250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:23856406-23856064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 6
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:26480023-26480353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:37382001-37381654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:42229519-42229166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:45023017-45023352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:51821701-51822021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
317, 48
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:51901803-51901437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:51940922-51940587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 45
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:60429887-60430226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:61976772-61977095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr13:15041281-15041623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr13:15192703-15193034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 46
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr13:18172531-18172186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 56
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr13:25695577-25695913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr13:40943439-40943093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr13:46112158-46111819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr13:4664671-4665008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr13:5278998-5279356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr13:6079228-6079561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 48
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr13:12283029-12282678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr13:20706011-20706355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 61
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr13:21241901-21242234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr13:34281871-34281526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr13:47964010-47964331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 11
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:971707-972048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 49
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:5263095-5263430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:6974351-6974011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:13261199-13260847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:14063333-14063672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:15257187-15257520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:15991031-15991382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:17021529-17021876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:17291939-17292279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:17855565-17855216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:18166921-18166581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 48
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:19393478-19393141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 59
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:19882844-19883185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 41
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:20666195-20666537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 57
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:20784779-20784443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 58
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:20820649-20820988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 49
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:20839758-20839408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 66
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:20879643-20879976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:23479220-23478877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 33
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:23667450-23667102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:25817704-25817378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 43
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:38283793-38284130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:40491424-40491065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:42200810-42200469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:44202180-44201858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
252, 59
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:46525251-46525580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:52894335-52893994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:54702382-54702028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:55674014-55674361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr13:33256687-33256345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
144, 46
               

               
Conread position:
               
2-118
               

               
Cow position:
               
chr13:11794898-11794783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
2-126
               

               
Cow position:
               
chr13:21524619-21524496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
118, 60
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr13:25261618-25261843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr13:32669022-32668796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr13:47216062-47216295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr13:15958811-15958535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr13:1231841-1231560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
95, 73
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr13:7059665-7059382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr13:12977754-12977495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr13:19364434-19364160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr13:61047397-61047134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr13:52284099-52283824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr13:6153589-6153900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr13:12574824-12574516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr13:16343877-16343572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
143, 15
               

               
Conread position:
               
2-332
               

               
Cow position:
               
chr13:43762355-43762034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 45
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr13:61990144-61990462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr13:56686617-56686296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 30
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr13:11460815-11460489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 60
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr13:55315999-55316342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr13:7076446-7076111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr13:9846264-9846608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr13:47756564-47756217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
95, 73
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr13:50690202-50690545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr13:57002921-57002580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr13:2414216-2413882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr13:23960618-23960949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr13:33352177-33352502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
167, 35
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr13:24754074-24753736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr13:13089214-13088881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 61
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr13:15288735-15289070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr13:24230403-24230058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr13:43480251-43479911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 60
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr13:20536689-20536503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr13:51108680-51108467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr13:30026301-30026055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 46
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr13:13339053-13338764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr13:17004403-17004685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
3-316
               

               
Cow position:
               
chr13:25537836-25537504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr13:38562134-38561803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr13:15869308-15868968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 19
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr13:25547404-25547728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
144, 44
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr13:26261605-26261935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr13:24715431-24715091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
93, 52
               

               
Conread position:
               
4-162
               

               
Cow position:
               
chr13:22025521-22025675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr13:27018804-27018624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr13:13265991-13265774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr13:38089865-38090090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr13:51297685-51297449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr13:13306290-13306016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr13:53566787-53566464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr13:10924716-10925074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr13:56543512-56543705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr13:3162685-3162461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 84
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr13:62474612-62474860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
165, 57
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr13:53536118-53536380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
142, 42
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr13:609655-609922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 57
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr13:31511882-31512151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 83
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr13:40657607-40657875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr13:966265-965963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr13:38329817-38329467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 57
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr13:43839361-43839558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
7-161
               

               
Cow position:
               
chr13:2113870-2113716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-181
               

               
Cow position:
               
chr13:36948985-36949156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
7-186
               

               
Cow position:
               
chr13:34113343-34113523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr13:52969536-52969725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
7-202
               

               
Cow position:
               
chr13:3970445-3970639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
7-202
               

               
Cow position:
               
chr13:8172591-8172397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
7-212
               

               
Cow position:
               
chr13:6975605-6975810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
169, 56
               

               
Conread position:
               
7-212
               

               
Cow position:
               
chr13:43812267-43812071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr13:36396983-36397199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-229
               

               
Cow position:
               
chr13:40533071-40532856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
143, 47
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr13:8473160-8472936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr13:42249891-42250117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr13:30794006-30793779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr13:1346358-1346128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr13:645730-645961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr13:12990823-12990592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr13:18121068-18120837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr13:32081682-32081913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr13:34871985-34872215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
53, 60
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr13:43106710-43106479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr13:42690206-42689978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:4035330-4035097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:12780680-12780447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:17015851-17016084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:18268307-18268540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:24556473-24556240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:25284543-25284776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:25849178-25849411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:38476986-38476753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:43892623-43892856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:45934430-45934663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:47022893-47022660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:49446562-49446795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr13:51328733-51328500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr13:1568483-1568249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr13:2560187-2559952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr13:4531131-4530896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr13:4964031-4964266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr13:6870105-6870339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
7-244
               

               
Cow position:
               
chr13:23099896-23099659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
7-246
               

               
Cow position:
               
chr13:19275076-19275314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-256
               

               
Cow position:
               
chr13:671045-671297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 160
               

               
Conread position:
               
7-269
               

               
Cow position:
               
chr13:41253802-41253549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 34
               

               
Conread position:
               
7-274
               

               
Cow position:
               
chr13:8838809-8839067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
171, 42
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr13:37617509-37617242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-280
               

               
Cow position:
               
chr13:6835624-6835878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr13:12618924-12619204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr13:15446231-15445945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr13:15528843-15529156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 55
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr13:18989890-18989604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 20
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr13:12408098-12408414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr13:23270028-23270332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr13:37981567-37981871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 43
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr13:9906928-9906587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
54, 175
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr13:20509917-20509588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
7-344
               

               
Cow position:
               
chr13:2404928-2404615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
141, 59
               

               
Conread position:
               
7-344
               

               
Cow position:
               
chr13:14771646-14771303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
7-344
               

               
Cow position:
               
chr13:47186409-47186088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
260, 52
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr13:27525076-27525408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr13:18491780-18491447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr13:19610391-19610715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
166, 54
               

               
Conread position:
               
8-202
               

               
Cow position:
               
chr13:17612762-17612569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
8-248
               

               
Cow position:
               
chr13:50546036-50545796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
8-275
               

               
Cow position:
               
chr13:52197825-52197564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
8-324
               

               
Cow position:
               
chr13:6540129-6540442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
170, 23
               

               
Conread position:
               
8-324
               

               
Cow position:
               
chr13:12207227-12206921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr13:20497836-20497501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
139, 26
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr13:33054207-33054515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr13:43919073-43919408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
119, 50
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr13:55583383-55583052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
8-348
               

               
Cow position:
               
chr13:13320964-13320646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
8-349
               

               
Cow position:
               
chr13:41806964-41806620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 55
               

               
Conread position:
               
9-209
               

               
Cow position:
               
chr13:21189464-21189263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
133, 53
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr13:24060167-24060368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
167, 41
               

               
Conread position:
               
9-289
               

               
Cow position:
               
chr13:59687696-59687970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
138, 39
               

               
Conread position:
               
9-337
               

               
Cow position:
               
chr13:5082837-5082509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
9-339
               

               
Cow position:
               
chr13:11644116-11643797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
9-342
               

               
Cow position:
               
chr13:15872632-15872296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
9-344
               

               
Cow position:
               
chr13:49503345-49503683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr13:34375452-34375173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
6, 21
               

               
Conread position:
               
11-335
               

               
Cow position:
               
chr13:20231019-20231328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
91, 51
               

               
Conread position:
               
12-243
               

               
Cow position:
               
chr13:50192616-50192386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
13-343
               

               
Cow position:
               
chr13:49824206-49823881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
14-211
               

               
Cow position:
               
chr13:15822916-15822730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr13:43151285-43151071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
133, 60
               

               
Conread position:
               
14-263
               

               
Cow position:
               
chr13:56605292-56605544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
14-277
               

               
Cow position:
               
chr13:1155530-1155783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
133, 35
               

               
Conread position:
               
14-277
               

               
Cow position:
               
chr13:17338612-17338349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
14-281
               

               
Cow position:
               
chr13:34904389-34904129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
196, 48
               

               
Conread position:
               
14-289
               

               
Cow position:
               
chr13:32535833-32535565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
14-323
               

               
Cow position:
               
chr13:11061162-11060861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
14-337
               

               
Cow position:
               
chr13:5758167-5758483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 36
               

               
Conread position:
               
14-337
               

               
Cow position:
               
chr13:19188482-19188161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
14-348
               

               
Cow position:
               
chr13:24586224-24585897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
14-348
               

               
Cow position:
               
chr13:46516250-46515905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
14-348
               

               
Cow position:
               
chr13:49022692-49023017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 48
               

               
Conread position:
               
14-348
               

               
Cow position:
               
chr13:52055418-52055745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 37
               

               
Conread position:
               
15-277
               

               
Cow position:
               
chr13:7488720-7488461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
86, 56
               

               
Conread position:
               
15-325
               

               
Cow position:
               
chr13:15110501-15110186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
16-277
               

               
Cow position:
               
chr13:607085-607338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
16-327
               

               
Cow position:
               
chr13:21176148-21176449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 34
               

               
Conread position:
               
16-342
               

               
Cow position:
               
chr13:20088523-20088860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
16-348
               

               
Cow position:
               
chr13:53574145-53573822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
17-343
               

               
Cow position:
               
chr13:60508944-60509266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
17-348
               

               
Cow position:
               
chr13:14016390-14016714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
18-289
               

               
Cow position:
               
chr13:13577854-13578126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
22-344
               

               
Cow position:
               
chr13:4420517-4420183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
22-347
               

               
Cow position:
               
chr13:4552973-4552667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
23-334
               

               
Cow position:
               
chr13:29831265-29831574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
24-197
               

               
Cow position:
               
chr13:24776447-24776284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
28-196
               

               
Cow position:
               
chr13:23682576-23682746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 35
               

               
Conread position:
               
28-208
               

               
Cow position:
               
chr13:18942049-18941865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
28-277
               

               
Cow position:
               
chr13:11821322-11821073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
28-277
               

               
Cow position:
               
chr13:13954224-13954473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
28-316
               

               
Cow position:
               
chr13:13176818-13176531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 34
               

               
Conread position:
               
28-316
               

               
Cow position:
               
chr13:15903181-15902905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
28-337
               

               
Cow position:
               
chr13:20473523-20473821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 34
               

               
Conread position:
               
28-342
               

               
Cow position:
               
chr13:9265665-9265971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
28-344
               

               
Cow position:
               
chr13:15281769-15282081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
28-348
               

               
Cow position:
               
chr13:9665233-9664910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
29-275
               

               
Cow position:
               
chr13:28689633-28689389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
30-245
               

               
Cow position:
               
chr13:20683115-20682901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
30-324
               

               
Cow position:
               
chr13:17346969-17346683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
31-239
               

               
Cow position:
               
chr13:4208653-4208860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
31-239
               

               
Cow position:
               
chr13:44424597-44424803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
31-348
               

               
Cow position:
               
chr13:54583042-54582723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
32-337
               

               
Cow position:
               
chr13:17158711-17159018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
124, 30
               

               
Conread position:
               
32-342
               

               
Cow position:
               
chr13:867288-866977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
33-343
               

               
Cow position:
               
chr13:25496169-25495857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
34-272
               

               
Cow position:
               
chr13:37795601-37795383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
34-275
               

               
Cow position:
               
chr13:22912847-22912607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
34-342
               

               
Cow position:
               
chr13:16247818-16247505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
34-344
               

               
Cow position:
               
chr13:2774289-2773980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
34-344
               

               
Cow position:
               
chr13:25604464-25604754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
34-347
               

               
Cow position:
               
chr13:37818591-37818901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
34-348
               

               
Cow position:
               
chr13:52057706-52057406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 28
               

               
Conread position:
               
35-287
               

               
Cow position:
               
chr13:38698211-38697961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
36-239
               

               
Cow position:
               
chr13:7790175-7789965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
36-244
               

               
Cow position:
               
chr13:28652959-28652756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
36-246
               

               
Cow position:
               
chr13:20880766-20880979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
36-251
               

               
Cow position:
               
chr13:14870690-14870478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
36-261
               

               
Cow position:
               
chr13:16024753-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
36-264
               

               
Cow position:
               
chr13:52922252-52922031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
36-277
               

               
Cow position:
               
chr13:15621972-15621730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
36-329
               

               
Cow position:
               
chr13:8524461-8524755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
37-275
               

               
Cow position:
               
chr13:49507690-49507928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
37-343
               

               
Cow position:
               
chr13:45726056-45725744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
38-344
               

               
Cow position:
               
chr13:18697003-18696694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
39-275
               

               
Cow position:
               
chr13:46324628-46324867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
39-287
               

               
Cow position:
               
chr13:6849087-6848836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
39-344
               

               
Cow position:
               
chr13:36771263-36771566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
39-348
               

               
Cow position:
               
chr13:7663267-7663573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 23
               

               
Conread position:
               
39-348
               

               
Cow position:
               
chr13:15195047-15195352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
40-266
               

               
Cow position:
               
chr13:36346127-36345906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
40-337
               

               
Cow position:
               
chr13:19581931-19582222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
40-339
               

               
Cow position:
               
chr13:23651588-23651302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
277, 22
               

               
Conread position:
               
40-344
               

               
Cow position:
               
chr13:9900305-9900012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
41-229
               

               
Cow position:
               
chr13:41154877-41155066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
41-343
               

               
Cow position:
               
chr13:19033706-19033413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
42-298
               

               
Cow position:
               
chr13:62601159-62600906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
105, 20
               

               
Conread position:
               
42-342
               

               
Cow position:
               
chr13:152108-151818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
43-233
               

               
Cow position:
               
chr13:16711785-16711591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
43-265
               

               
Cow position:
               
chr13:626715-626489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
43-336
               

               
Cow position:
               
chr13:26743276-26742986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
43-340
               

               
Cow position:
               
chr13:46736369-46736074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 138
               

               
Conread position:
               
45-337
               

               
Cow position:
               
chr13:48165274-48165566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
45-348
               

               
Cow position:
               
chr13:54388870-54389172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
47-227
               

               
Cow position:
               
chr13:26366032-26365852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
47-347
               

               
Cow position:
               
chr13:26698348-26698647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
47-348
               

               
Cow position:
               
chr13:17568950-17569251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
49-332
               

               
Cow position:
               
chr13:8374625-8374908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
49-343
               

               
Cow position:
               
chr13:9800656-9800377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
50-263
               

               
Cow position:
               
chr13:20128811-20128600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr13:20180563-20180288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
50-336
               

               
Cow position:
               
chr13:39368101-39367820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
50-347
               

               
Cow position:
               
chr13:43868970-43869262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
50-348
               

               
Cow position:
               
chr13:20174896-20174587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
51-243
               

               
Cow position:
               
chr13:47313064-47312871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 11
               

               
Conread position:
               
51-260
               

               
Cow position:
               
chr13:53070023-53070228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 129
               

               
Conread position:
               
51-277
               

               
Cow position:
               
chr13:1363841-1363614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 136
               

               
Conread position:
               
51-282
               

               
Cow position:
               
chr13:20440444-20440663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
51-288
               

               
Cow position:
               
chr13:23512514-23512279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
47, 129
               

               
Conread position:
               
51-319
               

               
Cow position:
               
chr13:45073783-45074036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
51-323
               

               
Cow position:
               
chr13:17966064-17966335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr13:31814018-31813748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 91
               

               
Conread position:
               
51-334
               

               
Cow position:
               
chr13:18999689-18999398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
51-343
               

               
Cow position:
               
chr13:6441953-6442250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 200
               

               
Conread position:
               
51-344
               

               
Cow position:
               
chr13:21107285-21107000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
83, 94
               

               
Conread position:
               
51-348
               

               
Cow position:
               
chr13:5671445-5671737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
51-348
               

               
Cow position:
               
chr13:18058104-18058398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
52-343
               

               
Cow position:
               
chr13:28552743-28552444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 139
               

               
Conread position:
               
53-332
               

               
Cow position:
               
chr13:15144229-15144499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
53-343
               

               
Cow position:
               
chr13:11381579-11381870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
53-347
               

               
Cow position:
               
chr13:20360415-20360125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
276, 80
               

               
Conread position:
               
54-276
               

               
Cow position:
               
chr13:18973296-18973525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
55-342
               

               
Cow position:
               
chr13:11808701-11808432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
60-334
               

               
Cow position:
               
chr13:62518194-62518462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
60-347
               

               
Cow position:
               
chr13:58763494-58763767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
61-343
               

               
Cow position:
               
chr13:1569058-1568786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
62-277
               

               
Cow position:
               
chr13:2822995-2822790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
62-343
               

               
Cow position:
               
chr13:12875836-12876118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 73
               
UCSC Genome Browser

               
Conread position:
               
63-230
               

               
Cow position:
               
chr13:29958814-29958652 (view  custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 37
               
UCSC Genome Browser

               
               
               
Conread position:
63-265

               
               
               
Cow position:
chr13:6455503-6455307 (view  custom track)

               
               
               
Alignm length:
204

               
               
               
Alignm identity:
148

               
               
               
Alignm E-value:
1e-28

               
               
               
Alignm gaps (pig, cow):
168, 18
UCSC Genome Browser

               
               
               
Conread position:
63-266

               
               
               
Cow position:
chr13:10098856-10099056 (view  custom track)

               
               
               
Alignm length:
206

               
               
               
Alignm identity:
158

               
               
               
Alignm E-value:
4e-38

               
               
               
Alignm gaps (pig, cow):
84, 100

               
               
               Conread position:63-276
               
               
               Cow position:chr13:21269445-21269661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:153
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):38, 153

               
               
               Conread position:63-289
               
               
               Cow position:chr13:52929844-52929619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:162
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):33, 118

               
               
               Conread position:63-333
               
               
               Cow position:chr13:8555598-8555329 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):42, 123

               
               
               Conread position:63-344
               
               
               Cow position:chr13:37640721-37640443 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:206
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):33, 56

               
               
               Conread position:63-345
               
               
               Cow position:chr13:6663616-6663900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:191
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):84, 35

               
               
               Conread position:63-348
               
               
               Cow position:chr13:20288464-20288187 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:225
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):84, 11

               
               
               Conread position:63-348
               
               
               Cow position:chr13:48598045-48597758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:210
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):36, 155

               
               
               Conread position:64-277
               
               
               Cow position:chr13:14878818-14879031 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):36, 55

               
               
               Conread position:64-299
               
               
               Cow position:chr13:48375511-48375735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):118, 101

               
               
               Conread position:64-339
               
               
               Cow position:chr13:25579053-25579332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:193
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):38, 68

               
               
               Conread position:67-324
               
               
               Cow position:chr13:2803599-2803339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:192
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):29, 6

               
               
               Conread position:67-343
               
               
               Cow position:chr13:51115897-51116171 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:207
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):94, 65

               
               
               Conread position:67-347
               
               
               Cow position:chr13:11321485-11321767 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):73, 101

               
               
               Conread position:68-249
               
               
               Cow position:chr13:32826324-32826510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:68-276
               
               
               Cow position:chr13:12745801-12745592 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):103, 69

               
               
               Conread position:68-276
               
               
               Cow position:chr13:41919025-41919235 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):28, 84

               
               
               Conread position:68-288
               
               
               Cow position:chr13:25381092-25380872 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):28, 113

               
               
               Conread position:68-339
               
               
               Cow position:chr13:52749348-52749612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:193
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):34, 68

               
               
               Conread position:68-343
               
               
               Cow position:chr13:44003852-44003556 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:204
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):32, 65

               
               
               Conread position:68-344
               
               
               Cow position:chr13:6389510-6389249 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:202
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):79, 114

               
               
               Conread position:68-349
               
               
               Cow position:chr13:11260399-11260125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:208
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):28, 63

               
               
               Conread position:69-274
               
               
               Cow position:chr13:13238706-13238499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:148
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):32, 53

               
               
               Conread position:69-287
               
               
               Cow position:chr13:17451223-17451006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):32, 66

               
               
               Conread position:69-337
               
               
               Cow position:chr13:11591875-11591610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:198
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):27, 90

               
               
               Conread position:69-343
               
               
               Cow position:chr13:49520693-49520969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:195
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):77, 110

               
               
               Conread position:69-348
               
               
               Cow position:chr13:49205105-49204853 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:205
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):257, 64

               
               
               Conread position:70-348
               
               
               Cow position:chr13:20217260-20217549 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:215
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:73-316
               
               
               Cow position:chr13:25434995-25435242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:176
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):80, 110

               
               
               Conread position:74-331
               
               
               Cow position:chr13:11820716-11820463 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):165, 14

               
               
               Conread position:75-288
               
               
               Cow position:chr13:50713325-50713119 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):22, 62

               
               
               Conread position:75-339
               
               
               Cow position:chr13:5910773-5911037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:185
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):27, 146

               
               
               Conread position:75-348
               
               
               Cow position:chr13:60375365-60375639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:210
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):72, 165

               
               
               Conread position:77-337
               
               
               Cow position:chr13:13765906-13765650 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:187
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):13, 54

               
               
               Conread position:80-309
               
               
               Cow position:chr13:34555716-34555940 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:177
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):94, 8

               
               
               Conread position:81-276
               
               
               Cow position:chr13:5060862-5060668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:137
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):17, 98

               
               
               Conread position:81-277
               
               
               Cow position:chr13:27550856-27550659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):66, 26

               
               
               Conread position:81-315
               
               
               Cow position:chr13:15194615-15194853 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:190
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:81-344
               
               
               Cow position:chr13:21135783-21136054 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:82-342
               
               
               Cow position:chr13:14576322-14576068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:192
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):63, 80

               
               
               Conread position:82-344
               
               
               Cow position:chr13:18995244-18994979 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:190
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):21, 162

               
               
               Conread position:82-346
               
               
               Cow position:chr13:6189500-6189749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:199
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:84-329
               
               
               Cow position:chr13:56678129-56677883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:178
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):14, 44

               
               
               Conread position:89-252
               
               
               Cow position:chr13:14967106-14967273 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:125
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):12, 86

               
               
               Conread position:89-311
               
               
               Cow position:chr13:47322295-47322524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:156
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:89-344
               
               
               Cow position:chr13:19279200-19278945 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):59, 10

               
               
               Conread position:90-325
               
               
               Cow position:chr13:19240544-19240303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:175
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):7, 92

               
               
               Conread position:90-345
               
               
               Cow position:chr13:19320643-19320382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:206
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:90-348
               
               
               Cow position:chr13:20534990-20534746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:197
               
               
               Alignm E-value:8.40779e-45
               
               
               Alignm gaps (pig, cow):13, 53

               
               
               Conread position:91-335
               
               
               Cow position:chr13:20155107-20154863 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:187
               
               
               Alignm E-value:6.00036e-42
               
               
               Alignm gaps (pig, cow):26, 105

               
               
               Conread position:91-343
               
               
               Cow position:chr13:55728006-55727756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):56, 13

               
               
               Conread position:91-344
               
               
               Cow position:chr13:17977447-17977207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:93-311
               
               
               Cow position:chr13:7265020-7265234 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):92, 55

               
               
               Conread position:93-335
               
               
               Cow position:chr13:8355302-8355067 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:188
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:93-337
               
               
               Cow position:chr13:12974907-12974674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):54, 18

               
               
               Conread position:94-329
               
               
               Cow position:chr13:8402160-8401923 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:183
               
               
               Alignm E-value:6.00036e-42
               
               
               Alignm gaps (pig, cow):31, 11

               
               
               Conread position:94-336
               
               
               Cow position:chr13:3989305-3989065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:177
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):59, 11

               
               
               Conread position:94-341
               
               
               Cow position:chr13:37527864-37528097 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:178
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):19, 40

               
               
               Conread position:94-344
               
               
               Cow position:chr13:13297780-13297532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:179
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):15, 35

               
               
               Conread position:95-300
               
               
               Cow position:chr13:60389385-60389591 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):29, 83

               
               
               Conread position:95-337
               
               
               Cow position:chr13:4158766-4158520 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:95-339
               
               
               Cow position:chr13:16038191-16038427 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):52, 6

               
               
               Conread position:95-339
               
               
               Cow position:chr13:47022462-47022221 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:188
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 51

               
               
               Conread position:95-343
               
               
               Cow position:chr13:620158-620390 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:172
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):89, 45

               
               
               Conread position:95-343
               
               
               Cow position:chr13:18929630-18929383 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):63, 150

               
               
               Conread position:95-343
               
               
               Cow position:chr13:49476188-49475929 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):51, 86

               
               
               Conread position:95-345
               
               
               Cow position:chr13:46329501-46329754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:193
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:95-348
               
               
               Cow position:chr13:54128491-54128750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):52, 6

               
               
               Conread position:97-348
               
               
               Cow position:chr13:16714161-16714417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:202
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):50, 129

               
               
               Conread position:98-337
               
               
               Cow position:chr13:50568317-50568546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:181
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):52, 79

               
               
               Conread position:100-343
               
               
               Cow position:chr13:21127246-21127484 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:165
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):218, 20

               
               
               Conread position:101-336
               
               
               Cow position:chr13:19778751-19778992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:167
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):21, 80

               
               
               Conread position:101-341
               
               
               Cow position:chr13:21171477-21171716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:186
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):24, 15

               
               
               Conread position:106-269
               
               
               Cow position:chr13:16203761-16203597 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):41, 77

               
               
               Conread position:106-285
               
               
               Cow position:chr13:50750962-50751144 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:134
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):42, 75

               
               
               Conread position:106-339
               
               
               Cow position:chr13:56034767-56035001 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):45, 139

               
               
               Conread position:106-343
               
               
               Cow position:chr13:23526201-23525964 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:182
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):78, 49

               
               
               Conread position:107-335
               
               
               Cow position:chr13:3211642-3211411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:166
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:107-348
               
               
               Cow position:chr13:52477555-52477796 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:187
               
               
               Alignm E-value:8.40779e-45
               
               
               Alignm gaps (pig, cow):38, 132

               
               
               Conread position:108-337
               
               
               Cow position:chr13:45073167-45073395 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):69, 38

               
               
               Conread position:109-324
               
               
               Cow position:chr13:20871478-20871263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):38, 176

               
               
               Conread position:110-310
               
               
               Cow position:chr13:48862008-48862208 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:156
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):40, 139

               
               
               Conread position:111-290
               
               
               Cow position:chr13:18005759-18005580 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:126
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):37, 73

               
               
               Conread position:111-316
               
               
               Cow position:chr13:185618-185411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:139
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:116-319
               
               
               Cow position:chr13:11397377-11397570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:159
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):63, 36

               
               
               Conread position:116-346
               
               
               Cow position:chr13:13196323-13196090 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:177
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:118-348
               
               
               Cow position:chr13:7149308-7149081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:184
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):58, 178

               
               
               Conread position:120-348
               
               
               Cow position:chr13:20115328-20115093 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:160
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):108, 8

               
               
               Conread position:121-344
               
               
               Cow position:chr13:9981764-9981986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:170
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):27, 109

               
               
               Conread position:121-348
               
               
               Cow position:chr13:11231233-11231447 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):12, 7

               
               
               Conread position:121-348
               
               
               Cow position:chr13:17822876-17823101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:161
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):19, 9

               
               
               Conread position:121-348
               
               
               Cow position:chr13:21170607-21170377 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:182
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):19, 14

               
               
               Conread position:121-348
               
               
               Cow position:chr13:39939490-39939720 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):32, 110

               
               
               Conread position:123-315
               
               
               Cow position:chr13:20868681-20868869 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:146
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):32, 66

               
               
               Conread position:124-337
               
               
               Cow position:chr13:827316-827106 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):29, 60

               
               
               Conread position:128-324
               
               
               Cow position:chr13:15757190-15756996 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:152
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):19, 53

               
               
               Conread position:128-337
               
               
               Cow position:chr13:42672352-42672563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:145
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):19, 52

               
               
               Conread position:129-335
               
               
               Cow position:chr13:55162280-55162074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:140
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):18, 70

               
               
               Conread position:130-312
               
               
               Cow position:chr13:29123373-29123189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):18, 73

               
               
               Conread position:130-339
               
               
               Cow position:chr13:52640883-52641090 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):18, 56

               
               
               Conread position:130-341
               
               
               Cow position:chr13:17563804-17563596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:153
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):17, 50

               
               
               Conread position:132-324
               
               
               Cow position:chr13:25428162-25428350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:137
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):15, 49

               
               
               Conread position:132-348
               
               
               Cow position:chr13:15239454-15239662 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):15, 49

               
               
               Conread position:136-320
               
               
               Cow position:chr13:18181713-18181898 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:150
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:137-348
               
               
               Cow position:chr13:18197546-18197759 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:171
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):11, 82

               
               
               Conread position:138-349
               
               
               Cow position:chr13:15460715-15460930 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:139-287
               
               
               Cow position:chr13:23480385-23480531 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:114
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):143, 23

               
               
               Conread position:139-337
               
               
               Cow position:chr13:24110543-24110340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:144
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:139-342
               
               
               Cow position:chr13:17838006-17837806 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:143
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:139-347
               
               
               Cow position:chr13:12673240-12673438 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:144
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:139-348
               
               
               Cow position:chr13:62008169-62007956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:157
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:144-275
               
               
               Cow position:chr13:41549735-41549862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:106
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:144-313
               
               
               Cow position:chr13:45108360-45108532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:133
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:144-338
               
               
               Cow position:chr13:14749682-14749484 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):31, 140

               
               
               Conread position:144-347
               
               
               Cow position:chr13:25504585-25504380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:154
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):179, 0

               
               
               Conread position:144-348
               
               
               Cow position:chr13:20314567-20314774 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:167
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:144-349
               
               
               Cow position:chr13:1147099-1147303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):70, 38

               
               
               Conread position:145-347
               
               
               Cow position:chr13:17611499-17611701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:164
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):38, 186

               
               
               Conread position:145-348
               
               
               Cow position:chr13:35557054-35557262 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:167
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:146-319
               
               
               Cow position:chr13:17089473-17089641 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:137
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:146-337
               
               
               Cow position:chr13:13211936-13211744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:141
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):37, 13

               
               
               Conread position:146-343
               
               
               Cow position:chr13:11103141-11103346 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:158
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:146-347
               
               
               Cow position:chr13:16020902-16020701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:146-348
               
               
               Cow position:chr13:19007982-19007785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:160
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):37, 99

               
               
               Conread position:147-337
               
               
               Cow position:chr13:40634902-40634724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:140
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):112, 14

               
               
               Conread position:152-313
               
               
               Cow position:chr13:60393827-60393668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:152-336
               
               
               Cow position:chr13:29663074-29662891 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:145
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):31, 56

               
               
               Conread position:153-337
               
               
               Cow position:chr13:28440492-28440675 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):23, 97

               
               
               Conread position:153-342
               
               
               Cow position:chr13:55494477-55494669 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:159
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):20, 179

               
               
               Conread position:154-344
               
               
               Cow position:chr13:8350373-8350173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:153
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:160-341
               
               
               Cow position:chr13:9117534-9117709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:160-344
               
               
               Cow position:chr13:34873627-34873442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:160-348
               
               
               Cow position:chr13:38035872-38035688 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:161-345
               
               
               Cow position:chr13:33601195-33601382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):16, 72

               
               
               Conread position:163-328
               
               
               Cow position:chr13:31529912-31529749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:132
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):24, 153

               
               
               Conread position:168-344
               
               
               Cow position:chr13:43525205-43525381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:134
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):15, 139

               
               
               Conread position:168-346
               
               
               Cow position:chr13:18340563-18340382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:136
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:172-313
               
               
               Cow position:chr13:47634533-47634391 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:116
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):8, 90

               
               
               Conread position:172-338
               
               
               Cow position:chr13:57985915-57986079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:172-342
               
               
               Cow position:chr13:11565860-11565692 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:128
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):37, 10

               
               
               Conread position:174-329
               
               
               Cow position:chr13:15069980-15069826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:174-343
               
               
               Cow position:chr13:15083682-15083519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:132
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:175-337
               
               
               Cow position:chr13:40154708-40154871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:116
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):144, 0

               
               
               Conread position:175-342
               
               
               Cow position:chr13:21980954-21981117 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:127
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:175-344
               
               
               Cow position:chr13:37621338-37621504 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:141
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:176-332
               
               
               Cow position:chr13:56535476-56535320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:129
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):34, 60

               
               
               Conread position:179-329
               
               
               Cow position:chr13:1242433-1242581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:115
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):47, 14

               
               
               Conread position:181-344
               
               
               Cow position:chr13:2776304-2776141 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:181-344
               
               
               Cow position:chr13:42640398-42640239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:181-348
               
               
               Cow position:chr13:14645067-14644902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:135
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):68, 47

               
               
               Conread position:182-338
               
               
               Cow position:chr13:49255220-49255380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:123
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):52, 149

               
               
               Conread position:182-344
               
               
               Cow position:chr13:1462282-1462439 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:182-344
               
               
               Cow position:chr13:3209306-3209469 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):113, 19

               
               
               Conread position:182-348
               
               
               Cow position:chr13:15997049-15996883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:182-348
               
               
               Cow position:chr13:19598651-19598816 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:182-348
               
               
               Cow position:chr13:51813921-51814083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:126
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):136, 55

               
               
               Conread position:183-334
               
               
               Cow position:chr13:84592-84440 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:127
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):128, 0

               
               
               Conread position:183-342
               
               
               Cow position:chr13:16160431-16160273 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):137, 67

               
               
               Conread position:183-348
               
               
               Cow position:chr13:14927274-14927111 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):55, 76

               
               
               Conread position:184-332
               
               
               Cow position:chr13:6183407-6183555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:109
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:184-341
               
               
               Cow position:chr13:54145463-54145621 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:120
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):78, 53

               
               
               Conread position:185-334
               
               
               Cow position:chr13:48465824-48465967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:119
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:185-344
               
               
               Cow position:chr13:6926529-6926369 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):136, 0

               
               
               Conread position:185-348
               
               
               Cow position:chr13:45439534-45439381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:124
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:186-348
               
               
               Cow position:chr13:37614180-37614349 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:133
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):47, 12

               
               
               Conread position:187-344
               
               
               Cow position:chr13:19750725-19750568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:116
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):78, 85

               
               
               Conread position:188-344
               
               
               Cow position:chr13:8699728-8699884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:112
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:189-320
               
               
               Cow position:chr13:48439539-48439669 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:99
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):76, 0

               
               
               Conread position:189-343
               
               
               Cow position:chr13:52880860-52881010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:119
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:190-319
               
               
               Cow position:chr13:15143836-15143964 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:98
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:190-340
               
               
               Cow position:chr13:16908224-16908074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:192-348
               
               
               Cow position:chr13:15061476-15061644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:125
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:193-340
               
               
               Cow position:chr13:57769985-57770130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:114
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):127, 60

               
               
               Conread position:195-343
               
               
               Cow position:chr13:52536567-52536416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:117
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:195-344
               
               
               Cow position:chr13:13775241-13775392 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:110
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):117, 0

               
               
               Conread position:197-348
               
               
               Cow position:chr13:8450330-8450182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:118
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):128, 0

               
               
               Conread position:199-345
               
               
               Cow position:chr13:10210661-10210804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:109
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:199-348
               
               
               Cow position:chr13:18092877-18093024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:115
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:199-348
               
               
               Cow position:chr13:38702878-38703030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:120
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):43, 99

               
               
               Conread position:200-341
               
               
               Cow position:chr13:42849136-42849275 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:106
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):126, 0

               
               
               Conread position:201-337
               
               
               Cow position:chr13:21295071-21294935 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:106
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:204-335
               
               
               Cow position:chr13:38012325-38012193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:99
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:210-341
               
               
               Cow position:chr13:6962439-6962307 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:102
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):123, 46

               
               
               Conread position:210-348
               
               
               Cow position:chr13:49283793-49283929 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:108
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):116, 0

               
               
               Conread position:210-348
               
               
               Cow position:chr13:53850811-53850669 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):111, 0

               
               
               Conread position:211-344
               
               
               Cow position:chr13:28439395-28439260 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:102
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):121, 0

               
               
               Conread position:211-348
               
               
               Cow position:chr13:33854698-33854835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:116
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:215-334
               
               
               Cow position:chr13:21277485-21277604 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:120
               
               
               Alignm identity:98
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:215-341
               
               
               Cow position:chr13:21188350-21188224 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:216-341
               
               
               Cow position:chr13:32363200-32363324 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:126
               
               
               Alignm identity:96
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:216-343
               
               
               Cow position:chr13:12237426-12237297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:104
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):119, 0

               
               
               Conread position:216-348
               
               
               Cow position:chr13:10711434-10711566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:104
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:217-342
               
               
               Cow position:chr13:9391540-9391416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:126
               
               
               Alignm identity:102
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):104, 0

               
               
               Conread position:217-348
               
               
               Cow position:chr13:31507464-31507592 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:100
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:217-348
               
               
               Cow position:chr13:37554894-37555022 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:106
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:217-349
               
               
               Cow position:chr13:52913853-52913724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:101
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):112, 0

               
               
               Conread position:218-348
               
               
               Cow position:chr13:16790188-16790062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:108
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):112, 0

               
               
               Conread position:220-341
               
               
               Cow position:chr13:26423028-26422903 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:126
               
               
               Alignm identity:98
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:228-344
               
               
               Cow position:chr13:20826754-20826871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:118
               
               
               Alignm identity:93
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:228-344
               
               
               Cow position:chr13:47644033-47643913 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:95
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:231-342
               
               
               Cow position:chr13:52249082-52249193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:112
               
               
               Alignm identity:90
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:231-349
               
               
               Cow position:chr13:16525257-16525380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:99
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):89, 44

               
               
               Conread position:233-344
               
               
               Cow position:chr13:28652705-28652594 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:112
               
               
               Alignm identity:90
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:242-344
               
               
               Cow position:chr13:5992810-5992708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:103
               
               
               Alignm identity:88
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:248-348
               
               
               Cow position:chr13:6951528-6951428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:101
               
               
               Alignm identity:85
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):0, 0
Show alignments to all cow chromosomes.