Cow genome map

Conread name: rgul0112_n14.y1

Conread position: 1-130
Cow position: chr28:8372270-8372397 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 1-143
Cow position: chr28:20760124-20759984 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 120
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 1-164
Cow position: chr28:17738279-17738115 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 60

Conread position: 1-164
Cow position: chr28:25498704-25498547 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 1-175
Cow position: chr28:5188602-5188435 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 46

Conread position: 1-178
Cow position: chr28:11451667-11451490 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 95, 50

Conread position: 1-179
Cow position: chr28:3077792-3077965 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 146, 49

Conread position: 1-180
Cow position: chr28:9108241-9108421 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 62

Conread position: 1-184
Cow position: chr28:19295561-19295381 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 146, 61

Conread position: 1-189
Cow position: chr28:16243959-16243774 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 32

Conread position: 1-198
Cow position: chr28:23775845-23776039 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 147, 61

Conread position: 1-208
Cow position: chr28:5658353-5658545 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 150, 35

Conread position: 1-212
Cow position: chr28:17029916-17029712 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 167, 46

Conread position: 1-218
Cow position: chr28:26784667-26784452 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 49

Conread position: 1-221
Cow position: chr28:9390565-9390349 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 152, 48

Conread position: 1-221
Cow position: chr28:22170918-22170695 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 101, 47

Conread position: 1-224
Cow position: chr28:10478543-10478326 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 61

Conread position: 1-225
Cow position: chr28:3751118-3751332 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 173, 40

Conread position: 1-225
Cow position: chr28:7980619-7980399 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 177, 61

Conread position: 1-226
Cow position: chr28:22739600-22739811 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 100, 25

Conread position: 1-228
Cow position: chr28:5773439-5773657 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 137, 36

Conread position: 1-228
Cow position: chr28:23480462-23480237 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 101, 61

Conread position: 1-229
Cow position: chr28:19222798-19222580 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 95, 49

Conread position: 1-229
Cow position: chr28:24646340-24646561 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 185, 61

Conread position: 1-233
Cow position: chr28:8682051-8681813 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 78, 30

Conread position: 1-235
Cow position: chr28:15063540-15063311 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 23, 62

Conread position: 1-235
Cow position: chr28:26269131-26269359 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 141, 61

Conread position: 1-239
Cow position: chr28:28222136-28222371 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 12

Conread position: 1-240
Cow position: chr28:25459325-25459567 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 62

Conread position: 1-240
Cow position: chr28:34082222-34081978 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 97, 61

Conread position: 1-243
Cow position: chr28:7607027-7607272 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 121, 61

Conread position: 1-245
Cow position: chr28:16253058-16252818 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 95, 46

Conread position: 1-245
Cow position: chr28:25424503-25424256 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 154, 61

Conread position: 1-249
Cow position: chr28:5904535-5904774 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 147, 29

Conread position: 1-252
Cow position: chr28:16406886-16407138 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 103, 61

Conread position: 1-253
Cow position: chr28:16401695-16401945 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 43

Conread position: 1-264
Cow position: chr28:3714601-3714858 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 59

Conread position: 1-264
Cow position: chr28:4057786-4058039 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 146, 16

Conread position: 1-264
Cow position: chr28:12758709-12758443 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 100, 61

Conread position: 1-267
Cow position: chr28:3256593-3256858 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-268
Cow position: chr28:2738012-2737745 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-269
Cow position: chr28:4587896-4588159 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 15

Conread position: 1-269
Cow position: chr28:7751501-7751239 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 61

Conread position: 1-269
Cow position: chr28:10534131-10533873 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 53

Conread position: 1-269
Cow position: chr28:22485047-22485315 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 96, 20

Conread position: 1-271
Cow position: chr28:18717323-18717066 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 50

Conread position: 1-276
Cow position: chr28:16686832-16687096 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 182, 59

Conread position: 1-276
Cow position: chr28:25070916-25071188 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 33

Conread position: 1-277
Cow position: chr28:10682018-10681755 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 6

Conread position: 1-277
Cow position: chr28:12946737-12947019 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 80

Conread position: 1-277
Cow position: chr28:26340136-26340402 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 61

Conread position: 1-282
Cow position: chr28:21502194-21502467 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 97, 61

Conread position: 1-285
Cow position: chr28:10745009-10745292 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 46

Conread position: 1-285
Cow position: chr28:18625022-18625312 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 1-287
Cow position: chr28:15263925-15263638 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 92, 67

Conread position: 1-287
Cow position: chr28:34442964-34442678 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 69

Conread position: 1-288
Cow position: chr28:5792503-5792789 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 24

Conread position: 1-289
Cow position: chr28:21380674-21380963 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-290
Cow position: chr28:13267581-13267872 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 1-290
Cow position: chr28:25727177-25727455 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 49

Conread position: 1-295
Cow position: chr28:21672598-21672881 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 1-299
Cow position: chr28:25283004-25283286 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 95, 20

Conread position: 1-299
Cow position: chr28:25563876-25564176 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 67

Conread position: 1-312
Cow position: chr28:11786909-11786612 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 101, 46

Conread position: 1-312
Cow position: chr28:16204533-16204229 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-313
Cow position: chr28:10529683-10529384 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 103, 47

Conread position: 1-316
Cow position: chr28:1099842-1099555 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 144, 49

Conread position: 1-316
Cow position: chr28:1837790-1838094 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 129, 50

Conread position: 1-316
Cow position: chr28:8408539-8408845 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 11

Conread position: 1-316
Cow position: chr28:13176879-13176580 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 177, 61

Conread position: 1-316
Cow position: chr28:24343166-24343475 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 49

Conread position: 1-319
Cow position: chr28:7228586-7228278 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 144, 27

Conread position: 1-324
Cow position: chr28:7865123-7865446 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 16

Conread position: 1-324
Cow position: chr28:11585408-11585085 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 52

Conread position: 1-324
Cow position: chr28:12619362-12619691 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 60

Conread position: 1-324
Cow position: chr28:13865645-13865957 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 146, 27

Conread position: 1-324
Cow position: chr28:23675943-23676255 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 1-325
Cow position: chr28:5074705-5074390 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 40

Conread position: 1-326
Cow position: chr28:11501092-11500763 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 48

Conread position: 1-327
Cow position: chr28:11818161-11817844 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 292, 61

Conread position: 1-328
Cow position: chr28:14512325-14512655 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 147, 43

Conread position: 1-328
Cow position: chr28:18591069-18591391 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 61

Conread position: 1-329
Cow position: chr28:3914509-3914839 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 49

Conread position: 1-329
Cow position: chr28:26922565-26922246 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 152, 48

Conread position: 1-332
Cow position: chr28:26719159-26719468 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 156, 27

Conread position: 1-333
Cow position: chr28:11426746-11426417 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 61

Conread position: 1-334
Cow position: chr28:18354519-18354200 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 101, 33

Conread position: 1-335
Cow position: chr28:14234772-14235080 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 99, 48

Conread position: 1-335
Cow position: chr28:29434625-29434300 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 0

Conread position: 1-336
Cow position: chr28:3078878-3078555 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 49

Conread position: 1-337
Cow position: chr28:3144092-3143748 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 48

Conread position: 1-337
Cow position: chr28:9285578-9285247 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 61

Conread position: 1-337
Cow position: chr28:10172614-10172287 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-337
Cow position: chr28:21355024-21355361 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 33

Conread position: 1-337
Cow position: chr28:22371879-22371537 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 31

Conread position: 1-337
Cow position: chr28:23410524-23410193 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 62

Conread position: 1-337
Cow position: chr28:26684912-26685247 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 150, 61

Conread position: 1-337
Cow position: chr28:26743421-26743756 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 48

Conread position: 1-337
Cow position: chr28:33051820-33052166 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 65

Conread position: 1-337
Cow position: chr28:34133663-34133990 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 50

Conread position: 1-338
Cow position: chr28:7268136-7267815 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 1-338
Cow position: chr28:22500683-22500371 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 14

Conread position: 1-339
Cow position: chr28:3024112-3023782 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 48

Conread position: 1-339
Cow position: chr28:16919362-16919037 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 1-340
Cow position: chr28:11752345-11752008 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 65

Conread position: 1-341
Cow position: chr28:34561158-34561477 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 182, 34

Conread position: 1-342
Cow position: chr28:5817646-5817978 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 101, 48

Conread position: 1-342
Cow position: chr28:10053539-10053191 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 40, 28

Conread position: 1-342
Cow position: chr28:12430409-12430739 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 49

Conread position: 1-342
Cow position: chr28:12598145-12598474 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 96, 67

Conread position: 1-342
Cow position: chr28:23621347-23621670 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 145, 48

Conread position: 1-342
Cow position: chr28:25056772-25057097 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-342
Cow position: chr28:29416917-29416587 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 61

Conread position: 1-343
Cow position: chr28:4282692-4282356 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 61

Conread position: 1-343
Cow position: chr28:5771169-5771498 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 214, 48

Conread position: 1-343
Cow position: chr28:15601062-15601412 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 226
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 18

Conread position: 1-343
Cow position: chr28:19222346-19222016 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 61

Conread position: 1-343
Cow position: chr28:20313075-20313415 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 6

Conread position: 1-343
Cow position: chr28:22321221-22321556 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 61

Conread position: 1-343
Cow position: chr28:28766110-28765767 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 126, 61

Conread position: 1-343
Cow position: chr28:34230029-34230364 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 61

Conread position: 1-343
Cow position: chr28:34878173-34877846 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 36

Conread position: 1-344
Cow position: chr28:2898795-2899126 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 46

Conread position: 1-344
Cow position: chr28:12964377-12964706 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 13

Conread position: 1-344
Cow position: chr28:14649148-14649478 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 40

Conread position: 1-344
Cow position: chr28:14710144-14710473 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 16

Conread position: 1-344
Cow position: chr28:16109744-16110074 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 95, 54

Conread position: 1-344
Cow position: chr28:19080048-19079708 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 37

Conread position: 1-344
Cow position: chr28:21104048-21103693 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 99, 50

Conread position: 1-344
Cow position: chr28:26220061-26220393 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 32

Conread position: 1-344
Cow position: chr28:31648873-31649210 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 58

Conread position: 1-345
Cow position: chr28:8022311-8021966 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 19

Conread position: 1-345
Cow position: chr28:14997861-14998208 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 61

Conread position: 1-347
Cow position: chr28:4090245-4089918 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 48

Conread position: 1-347
Cow position: chr28:9740271-9740606 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 21

Conread position: 1-347
Cow position: chr28:16085124-16085464 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 24

Conread position: 1-348
Cow position: chr28:3408418-3408080 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 110, 60

Conread position: 1-348
Cow position: chr28:3492985-3492645 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 38

Conread position: 1-348
Cow position: chr28:4070768-4071103 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 34

Conread position: 1-348
Cow position: chr28:4308099-4307751 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 61, 31

Conread position: 1-348
Cow position: chr28:4938638-4938943 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 1-348
Cow position: chr28:5203999-5204336 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 48

Conread position: 1-348
Cow position: chr28:5437292-5436944 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 49

Conread position: 1-348
Cow position: chr28:5931153-5931488 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 102, 46

Conread position: 1-348
Cow position: chr28:8347534-8347876 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 98, 38

Conread position: 1-348
Cow position: chr28:8787346-8787681 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 40

Conread position: 1-348
Cow position: chr28:9636657-9636316 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 61

Conread position: 1-348
Cow position: chr28:10616152-10615805 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 84, 48

Conread position: 1-348
Cow position: chr28:11423005-11422673 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 40

Conread position: 1-348
Cow position: chr28:11884723-11884384 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 30

Conread position: 1-348
Cow position: chr28:12951232-12951558 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 100, 46

Conread position: 1-348
Cow position: chr28:13474105-13474440 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 40

Conread position: 1-348
Cow position: chr28:16346727-16346394 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 48

Conread position: 1-348
Cow position: chr28:16386706-16386377 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 95, 39

Conread position: 1-348
Cow position: chr28:21844755-21845096 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 61

Conread position: 1-348
Cow position: chr28:21868251-21868599 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-348
Cow position: chr28:22345818-22346167 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 41

Conread position: 1-348
Cow position: chr28:23459944-23460286 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 61

Conread position: 1-348
Cow position: chr28:23793503-23793169 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 46

Conread position: 1-348
Cow position: chr28:25596432-25596765 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 35

Conread position: 1-348
Cow position: chr28:26103515-26103840 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 95, 36

Conread position: 1-348
Cow position: chr28:27218120-27218467 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 61

Conread position: 1-348
Cow position: chr28:30303396-30303066 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 107, 58

Conread position: 2-200
Cow position: chr28:8935734-8935928 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 59, 0

Conread position: 2-228
Cow position: chr28:4880463-4880243 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 197, 47

Conread position: 2-228
Cow position: chr28:15375025-15374802 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 95, 60

Conread position: 2-235
Cow position: chr28:8084500-8084732 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 60

Conread position: 2-238
Cow position: chr28:8963324-8963552 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 52

Conread position: 2-246
Cow position: chr28:18790811-18791055 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 28

Conread position: 2-269
Cow position: chr28:12367581-12367848 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 73

Conread position: 2-275
Cow position: chr28:4158250-4157982 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 47

Conread position: 2-276
Cow position: chr28:9176953-9176682 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 143, 59

Conread position: 2-277
Cow position: chr28:7144589-7144870 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 95, 45

Conread position: 2-277
Cow position: chr28:17638066-17637795 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 133, 45

Conread position: 2-287
Cow position: chr28:27313948-27313652 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 100, 60

Conread position: 2-288
Cow position: chr28:22323066-22323349 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 95, 48

Conread position: 2-307
Cow position: chr28:18186345-18186656 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 67

Conread position: 2-316
Cow position: chr28:5128929-5128619 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 60

Conread position: 2-323
Cow position: chr28:32734893-32735206 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 99

Conread position: 2-324
Cow position: chr28:6059672-6059352 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 64

Conread position: 2-324
Cow position: chr28:21598453-21598133 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 57

Conread position: 2-329
Cow position: chr28:33163667-33163341 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 59

Conread position: 2-330
Cow position: chr28:14933762-14934081 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 93, 60

Conread position: 2-335
Cow position: chr28:25249156-25249482 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 31

Conread position: 2-336
Cow position: chr28:5144722-5144392 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 48

Conread position: 2-339
Cow position: chr28:3746002-3746332 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 60

Conread position: 2-339
Cow position: chr28:5236802-5236472 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 103, 60

Conread position: 2-342
Cow position: chr28:29199527-29199865 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 39

Conread position: 2-343
Cow position: chr28:14657501-14657849 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 48

Conread position: 2-344
Cow position: chr28:31110205-31109864 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 101, 47

Conread position: 2-348
Cow position: chr28:4188335-4188694 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 143, 38

Conread position: 3-218
Cow position: chr28:7547545-7547316 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 184

Conread position: 3-221
Cow position: chr28:8348851-8348635 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 145, 59

Conread position: 3-277
Cow position: chr28:7512790-7512514 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 99, 59

Conread position: 3-277
Cow position: chr28:15272459-15272203 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 44

Conread position: 3-277
Cow position: chr28:26533344-26533613 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 91, 63

Conread position: 3-338
Cow position: chr28:4138868-4138539 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 228
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 130, 52

Conread position: 3-339
Cow position: chr28:10844920-10845232 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 54

Conread position: 3-341
Cow position: chr28:4158753-4159089 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 39

Conread position: 3-341
Cow position: chr28:5366329-5365989 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 224
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 122, 51

Conread position: 3-348
Cow position: chr28:4884465-4884111 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 59

Conread position: 3-348
Cow position: chr28:5684511-5684842 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 3-348
Cow position: chr28:16211295-16210959 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 60

Conread position: 3-348
Cow position: chr28:16370273-16369942 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 4-197
Cow position: chr28:6051535-6051726 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 174, 24

Conread position: 4-201
Cow position: chr28:5071357-5071161 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 46

Conread position: 4-211
Cow position: chr28:7590379-7590177 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 45

Conread position: 4-242
Cow position: chr28:2905383-2905610 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 143, 46

Conread position: 4-253
Cow position: chr28:6861756-6862000 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 151, 46

Conread position: 4-276
Cow position: chr28:11380240-11379971 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 120, 58

Conread position: 4-346
Cow position: chr28:4809596-4809917 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 4-348
Cow position: chr28:31841537-31841205 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 58

Conread position: 5-162
Cow position: chr28:24606010-24605853 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 92, 7

Conread position: 5-215
Cow position: chr28:9267904-9268106 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 57

Conread position: 5-239
Cow position: chr28:11280898-11280665 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 92, 83

Conread position: 5-246
Cow position: chr28:6334288-6334523 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 83

Conread position: 5-285
Cow position: chr28:16770386-16770669 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 92, 57

Conread position: 6-201
Cow position: chr28:12457961-12458156 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 91, 69

Conread position: 6-249
Cow position: chr28:19515587-19515347 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 141, 56

Conread position: 7-180
Cow position: chr28:31433178-31433353 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 55

Conread position: 7-188
Cow position: chr28:3187483-3187299 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 55

Conread position: 7-202
Cow position: chr28:10563453-10563646 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 81

Conread position: 7-231
Cow position: chr28:6960302-6960528 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 63

Conread position: 7-232
Cow position: chr28:1957424-1957648 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 55

Conread position: 7-232
Cow position: chr28:25411679-25411903 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 43

Conread position: 7-232
Cow position: chr28:28472061-28472285 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 68

Conread position: 7-234
Cow position: chr28:12961627-12961853 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 44

Conread position: 7-234
Cow position: chr28:30900088-30899860 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 151
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 175

Conread position: 7-239
Cow position: chr28:20966601-20966370 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 68

Conread position: 7-239
Cow position: chr28:23721138-23721366 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 81

Conread position: 7-241
Cow position: chr28:1575444-1575211 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-241
Cow position: chr28:3892038-3892271 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 61

Conread position: 7-241
Cow position: chr28:7197047-7196814 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 44

Conread position: 7-241
Cow position: chr28:7794353-7794119 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 46

Conread position: 7-241
Cow position: chr28:8066589-8066822 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 44

Conread position: 7-241
Cow position: chr28:23823264-23823030 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 155
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-241
Cow position: chr28:24257741-24257974 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chr28:800476-800241 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chr28:1199256-1199491 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 157
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chr28:7397207-7397444 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chr28:15285738-15285504 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chr28:15998460-15998226 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chr28:17130803-17130567 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 55

Conread position: 7-243
Cow position: chr28:22736145-22736380 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 157
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chr28:26599632-26599866 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chr28:29135504-29135739 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-244
Cow position: chr28:8395780-8396014 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 59

Conread position: 7-248
Cow position: chr28:6546581-6546338 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 68

Conread position: 7-252
Cow position: chr28:34579614-34579371 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 43

Conread position: 7-252
Cow position: chr28:34581309-34581065 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 43

Conread position: 7-254
Cow position: chr28:17370105-17370351 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 81

Conread position: 7-275
Cow position: chr28:11931580-11931309 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 55

Conread position: 7-277
Cow position: chr28:6775827-6775559 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 66

Conread position: 7-277
Cow position: chr28:23212181-23211908 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 56

Conread position: 7-277
Cow position: chr28:27683900-27683629 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 55

Conread position: 7-279
Cow position: chr28:5638112-5638383 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-287
Cow position: chr28:7416203-7415930 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 90, 34

Conread position: 7-287
Cow position: chr28:10669380-10669664 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 42

Conread position: 7-290
Cow position: chr28:7503644-7503928 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 90, 55

Conread position: 7-329
Cow position: chr28:7549257-7548936 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 55

Conread position: 7-335
Cow position: chr28:4016333-4016659 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 131

Conread position: 7-340
Cow position: chr28:11687227-11686895 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 55

Conread position: 7-341
Cow position: chr28:28163897-28164219 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 55

Conread position: 7-342
Cow position: chr28:4881440-4881105 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 43

Conread position: 7-343
Cow position: chr28:25973335-25973675 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 224
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 68

Conread position: 7-344
Cow position: chr28:4841590-4841253 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 55

Conread position: 7-344
Cow position: chr28:7698177-7697845 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 24

Conread position: 7-345
Cow position: chr28:20124591-20124921 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 37

Conread position: 7-347
Cow position: chr28:9099741-9100070 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 89, 55

Conread position: 7-348
Cow position: chr28:23616208-23616547 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 90, 56

Conread position: 8-277
Cow position: chr28:28356724-28356456 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 65

Conread position: 8-346
Cow position: chr28:11047393-11047734 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 226
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 88, 54

Conread position: 9-269
Cow position: chr28:19054824-19055076 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 92, 41

Conread position: 9-275
Cow position: chr28:11733317-11733052 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 53

Conread position: 9-343
Cow position: chr28:751032-751361 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 87, 53

Conread position: 9-348
Cow position: chr28:4835038-4834700 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 53

Conread position: 11-228
Cow position: chr28:118246-118029 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 85, 51

Conread position: 11-253
Cow position: chr28:22279384-22279154 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 39

Conread position: 11-335
Cow position: chr28:30937857-30937543 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 12-262
Cow position: chr28:3000784-3000553 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 209, 47

Conread position: 12-334
Cow position: chr28:15044048-15043735 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 38

Conread position: 14-276
Cow position: chr28:32305184-32304923 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 63

Conread position: 14-287
Cow position: chr28:23530677-23530954 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 48

Conread position: 14-320
Cow position: chr28:26614699-26614986 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 46

Conread position: 14-334
Cow position: chr28:23724643-23724331 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 256, 35

Conread position: 14-339
Cow position: chr28:26982934-26982606 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 48

Conread position: 14-339
Cow position: chr28:34430614-34430294 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 83, 58

Conread position: 14-348
Cow position: chr28:24966205-24966528 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 27

Conread position: 14-348
Cow position: chr28:33884220-33884542 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 48

Conread position: 15-265
Cow position: chr28:3105052-3105325 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 26

Conread position: 15-344
Cow position: chr28:10999855-10999534 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 149, 35

Conread position: 15-348
Cow position: chr28:11829129-11828817 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 48

Conread position: 16-228
Cow position: chr28:19023947-19024166 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 87, 52

Conread position: 16-321
Cow position: chr28:2862676-2862982 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 46

Conread position: 16-339
Cow position: chr28:11866855-11866533 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 46

Conread position: 16-347
Cow position: chr28:6091174-6091505 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 47

Conread position: 16-348
Cow position: chr28:10977681-10977982 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 250, 33

Conread position: 17-214
Cow position: chr28:13290319-13290122 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 130, 25

Conread position: 17-313
Cow position: chr28:31987417-31987720 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 18-285
Cow position: chr28:16416456-16416720 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 40

Conread position: 18-329
Cow position: chr28:13607701-13608020 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 129, 12

Conread position: 18-345
Cow position: chr28:9684504-9684199 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 21-342
Cow position: chr28:2961012-2960696 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 34

Conread position: 22-252
Cow position: chr28:28903846-28903617 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 9

Conread position: 22-344
Cow position: chr28:2132102-2131787 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 40

Conread position: 27-211
Cow position: chr28:23869291-23869474 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 48

Conread position: 28-277
Cow position: chr28:14720951-14720714 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 119, 31

Conread position: 28-277
Cow position: chr28:26264630-26264897 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 21

Conread position: 29-306
Cow position: chr28:17235901-17235637 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 29-348
Cow position: chr28:21363574-21363885 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 120, 20

Conread position: 31-344
Cow position: chr28:2752671-2752357 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 31

Conread position: 32-211
Cow position: chr28:11798975-11798795 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 41

Conread position: 32-333
Cow position: chr28:5826770-5827076 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 64, 28

Conread position: 32-346
Cow position: chr28:9426520-9426212 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 63, 17

Conread position: 34-348
Cow position: chr28:33036638-33036336 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 36-188
Cow position: chr28:15007996-15008144 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 26

Conread position: 36-222
Cow position: chr28:657618-657436 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 5, 12

Conread position: 36-320
Cow position: chr28:3169361-3169076 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 26

Conread position: 36-339
Cow position: chr28:20409222-20409518 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 5, 27

Conread position: 37-337
Cow position: chr28:29989281-29988981 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 25

Conread position: 37-342
Cow position: chr28:5199664-5199959 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 110, 22

Conread position: 37-343
Cow position: chr28:4643931-4643634 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 39-289
Cow position: chr28:4098676-4098912 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 23

Conread position: 39-337
Cow position: chr28:661947-662237 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 253, 27

Conread position: 39-344
Cow position: chr28:19026177-19025870 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 40-342
Cow position: chr28:1383440-1383140 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 22

Conread position: 40-344
Cow position: chr28:11527422-11527120 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 10

Conread position: 41-336
Cow position: chr28:30327255-30326963 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 21

Conread position: 43-277
Cow position: chr28:7439083-7439320 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 19

Conread position: 45-287
Cow position: chr28:4440143-4440376 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 17

Conread position: 46-347
Cow position: chr28:22813103-22813397 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 41

Conread position: 48-324
Cow position: chr28:33285270-33284993 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 14

Conread position: 48-348
Cow position: chr28:22332376-22332673 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 123

Conread position: 50-268
Cow position: chr28:18760202-18759985 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 12

Conread position: 51-223
Cow position: chr28:32747773-32747936 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 12

Conread position: 51-240
Cow position: chr28:33032109-33032295 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 15

Conread position: 51-299
Cow position: chr28:21570031-21570282 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 156

Conread position: 51-319
Cow position: chr28:32365689-32365955 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 19, 11

Conread position: 51-320
Cow position: chr28:16841900-16841655 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 198, 11

Conread position: 51-332
Cow position: chr28:25806415-25806700 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 134

Conread position: 51-336
Cow position: chr28:1632811-1632528 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 73, 38

Conread position: 51-341
Cow position: chr28:5273598-5273296 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 258

Conread position: 51-344
Cow position: chr28:6971500-6971209 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 71

Conread position: 51-348
Cow position: chr28:10606785-10606495 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 11

Conread position: 51-348
Cow position: chr28:24082116-24082412 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 11

Conread position: 52-236
Cow position: chr28:7608133-7607947 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 93, 10

Conread position: 53-225
Cow position: chr28:10212863-10212699 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 53-329
Cow position: chr28:23007886-23007607 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 15

Conread position: 54-313
Cow position: chr28:2872764-2873025 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 55-335
Cow position: chr28:616232-616510 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 92, 48

Conread position: 57-258
Cow position: chr28:22338845-22339046 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 12

Conread position: 63-208
Cow position: chr28:27428601-27428748 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 29

Conread position: 63-211
Cow position: chr28:10202337-10202478 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 63-233
Cow position: chr28:7542229-7542056 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 63-347
Cow position: chr28:30746872-30746588 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 99

Conread position: 63-348
Cow position: chr28:10863926-10863653 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 76

Conread position: 64-276
Cow position: chr28:10057735-10057518 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 120

Conread position: 64-347
Cow position: chr28:13245401-13245705 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 129

Conread position: 67-300
Cow position: chr28:4536316-4536552 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 80, 106

Conread position: 67-329
Cow position: chr28:24017857-24018109 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 52, 76

Conread position: 67-337
Cow position: chr28:3740744-3741006 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 67-343
Cow position: chr28:27161470-27161191 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 21

Conread position: 67-344
Cow position: chr28:9812143-9812408 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 33

Conread position: 68-323
Cow position: chr28:22571804-22571552 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 152, 109

Conread position: 69-344
Cow position: chr28:19262727-19262450 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 27, 95

Conread position: 69-348
Cow position: chr28:25728060-25728336 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 111

Conread position: 70-338
Cow position: chr28:7009112-7008843 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 92, 32

Conread position: 72-348
Cow position: chr28:3449164-3449451 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 31, 114

Conread position: 73-233
Cow position: chr28:5553077-5552912 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 73-251
Cow position: chr28:10762525-10762711 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 73-319
Cow position: chr28:12892567-12892325 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 70, 9

Conread position: 73-342
Cow position: chr28:23296190-23296457 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 17

Conread position: 73-344
Cow position: chr28:25399746-25400004 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 74-337
Cow position: chr28:5193187-5193462 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 7

Conread position: 75-337
Cow position: chr28:1538036-1538290 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 99

Conread position: 75-348
Cow position: chr28:8140350-8140623 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 96

Conread position: 76-287
Cow position: chr28:2652432-2652226 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 68

Conread position: 78-348
Cow position: chr28:11346614-11346347 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 93

Conread position: 79-343
Cow position: chr28:23447949-23447692 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 7

Conread position: 80-339
Cow position: chr28:12672588-12672332 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 50

Conread position: 84-331
Cow position: chr28:5166644-5166891 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 16

Conread position: 89-348
Cow position: chr28:11079188-11079444 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 134

Conread position: 90-341
Cow position: chr28:10589145-10588888 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 5

Conread position: 90-342
Cow position: chr28:32174514-32174764 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 61, 15

Conread position: 92-348
Cow position: chr28:25128768-25129026 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 167

Conread position: 94-341
Cow position: chr28:5577412-5577664 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 45, 90

Conread position: 94-348
Cow position: chr28:12933844-12933591 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 74

Conread position: 95-277
Cow position: chr28:3484465-3484650 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 123

Conread position: 95-345
Cow position: chr28:3011385-3011132 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 52, 164

Conread position: 97-335
Cow position: chr28:19564338-19564102 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 87, 33

Conread position: 97-341
Cow position: chr28:17398335-17398100 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 97-341
Cow position: chr28:17414576-17414341 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 97-341
Cow position: chr28:34248133-34247897 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 99-287
Cow position: chr28:17071225-17071417 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 100-276
Cow position: chr28:26055368-26055549 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 100-277
Cow position: chr28:12363268-12363087 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 100-328
Cow position: chr28:17601982-17601754 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 102

Conread position: 109-319
Cow position: chr28:4179455-4179663 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 20

Conread position: 111-341
Cow position: chr28:13233205-13232977 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 73

Conread position: 112-331
Cow position: chr28:16246158-16245941 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 26

Conread position: 115-341
Cow position: chr28:7388860-7388636 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 65

Conread position: 116-344
Cow position: chr28:8147953-8147727 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 58

Conread position: 117-339
Cow position: chr28:11559724-11559500 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 117-348
Cow position: chr28:7927084-7927311 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 35, 114

Conread position: 121-348
Cow position: chr28:7350571-7350795 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 56

Conread position: 122-329
Cow position: chr28:24706818-24707019 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 51

Conread position: 123-336
Cow position: chr28:30865335-30865548 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 17

Conread position: 124-235
Cow position: chr28:8372594-8372708 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 124-342
Cow position: chr28:4045769-4045981 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 205, 28

Conread position: 125-348
Cow position: chr28:4181921-4182144 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 56

Conread position: 126-341
Cow position: chr28:12070154-12070365 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 89

Conread position: 126-348
Cow position: chr28:5139078-5138857 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 173

Conread position: 129-288
Cow position: chr28:3161032-3160872 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 51

Conread position: 129-348
Cow position: chr28:11348351-11348562 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 0

Conread position: 130-348
Cow position: chr28:3445559-3445338 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 73

Conread position: 130-348
Cow position: chr28:13090604-13090387 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 42

Conread position: 132-348
Cow position: chr28:777598-777818 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 15, 22

Conread position: 139-338
Cow position: chr28:17012358-17012165 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 139-348
Cow position: chr28:4013020-4013225 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 143-340
Cow position: chr28:7776565-7776368 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 9

Conread position: 144-338
Cow position: chr28:20759763-20759571 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 144-339
Cow position: chr28:3411053-3410854 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 31, 179

Conread position: 144-345
Cow position: chr28:4823545-4823741 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 189, 35

Conread position: 145-344
Cow position: chr28:4873409-4873208 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 146-333
Cow position: chr28:3275431-3275617 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 129

Conread position: 146-333
Cow position: chr28:7619212-7619024 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 151
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 146-336
Cow position: chr28:4765616-4765804 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 121, 31

Conread position: 148-348
Cow position: chr28:26531339-26531136 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 45, 26

Conread position: 151-343
Cow position: chr28:6283542-6283355 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 6, 29

Conread position: 152-341
Cow position: chr28:4438656-4438845 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 141, 180

Conread position: 152-344
Cow position: chr28:7557776-7557596 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 169, 36

Conread position: 154-329
Cow position: chr28:2762142-2762317 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 155-337
Cow position: chr28:17601603-17601424 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 157-341
Cow position: chr28:11987123-11987305 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 107

Conread position: 157-341
Cow position: chr28:12055361-12055543 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 107

Conread position: 157-341
Cow position: chr28:34843623-34843441 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 21

Conread position: 157-348
Cow position: chr28:3726262-3726067 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 32

Conread position: 160-348
Cow position: chr28:5235836-5236016 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 16

Conread position: 160-348
Cow position: chr28:20397416-20397226 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 158, 22

Conread position: 163-315
Cow position: chr28:10964379-10964527 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 34, 28

Conread position: 163-344
Cow position: chr28:7498192-7498010 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 163-348
Cow position: chr28:7156791-7156979 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 166-335
Cow position: chr28:11816707-11816538 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 166-337
Cow position: chr28:2279630-2279465 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 155, 71

Conread position: 167-336
Cow position: chr28:17949154-17948984 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 0

Conread position: 167-342
Cow position: chr28:21046616-21046451 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 171-343
Cow position: chr28:17680586-17680758 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 171-343
Cow position: chr28:17739788-17739958 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 66

Conread position: 173-334
Cow position: chr28:32179662-32179822 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 63

Conread position: 174-348
Cow position: chr28:9705621-9705797 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 159, 13

Conread position: 175-285
Cow position: chr28:17393744-17393855 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 180-328
Cow position: chr28:4361475-4361330 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 180-337
Cow position: chr28:4051174-4051328 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 180-339
Cow position: chr28:4185879-4186038 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 36

Conread position: 180-348
Cow position: chr28:4006759-4006923 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 180-348
Cow position: chr28:7132113-7131949 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 88, 15

Conread position: 180-348
Cow position: chr28:32358081-32358246 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 182-316
Cow position: chr28:5205246-5205380 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 182-336
Cow position: chr28:19216796-19216952 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 69

Conread position: 182-337
Cow position: chr28:6975216-6975371 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 182-337
Cow position: chr28:12991111-12991272 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 182-337
Cow position: chr28:21008690-21008537 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 182-343
Cow position: chr28:5630073-5630232 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 182-344
Cow position: chr28:18770060-18770215 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 183-348
Cow position: chr28:10775737-10775569 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 91

Conread position: 184-333
Cow position: chr28:8304224-8304373 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 65

Conread position: 184-344
Cow position: chr28:2772690-2772847 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 185-342
Cow position: chr28:24646571-24646726 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 186-343
Cow position: chr28:11398818-11398661 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 186-344
Cow position: chr28:8149653-8149495 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 187-342
Cow position: chr28:5254854-5255009 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 187-344
Cow position: chr28:22148034-22147877 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 11

Conread position: 188-334
Cow position: chr28:11016389-11016536 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 27

Conread position: 188-348
Cow position: chr28:4101501-4101661 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 49, 140

Conread position: 192-337
Cow position: chr28:29850830-29850685 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 193-324
Cow position: chr28:3147468-3147596 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 197-344
Cow position: chr28:3397207-3397067 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 198-335
Cow position: chr28:8396326-8396463 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 198-348
Cow position: chr28:5805662-5805808 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 199-348
Cow position: chr28:4364830-4364683 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 121, 49

Conread position: 199-348
Cow position: chr28:19039027-19038876 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 201-321
Cow position: chr28:25675511-25675391 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 201-348
Cow position: chr28:16879567-16879710 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 125, 0

Conread position: 203-348
Cow position: chr28:30902122-30902263 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 204-337
Cow position: chr28:4248654-4248523 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 129, 24

Conread position: 204-343
Cow position: chr28:27429028-27429165 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 210-337
Cow position: chr28:18533903-18533777 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 210-339
Cow position: chr28:24996610-24996482 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 214-337
Cow position: chr28:10890728-10890605 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 215-337
Cow position: chr28:9109224-9109346 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 91

Conread position: 215-347
Cow position: chr28:16362526-16362399 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 119, 84

Conread position: 216-343
Cow position: chr28:10212418-10212289 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 217-344
Cow position: chr28:4022683-4022810 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 223-348
Cow position: chr28:2777546-2777672 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 228-348
Cow position: chr28:2151419-2151296 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 229-348
Cow position: chr28:3678384-3678501 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 234-348
Cow position: chr28:8936177-8936290 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 258-348
Cow position: chr28:4100708-4100619 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 259-348
Cow position: chr28:4588370-4588457 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.