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Cow genome map

           
Conread name:
           
rgul0112_n14.y1
        

               
Conread position:
               
1-122
               

               
Cow position:
               
chr9:20465478-20465597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr9:58131489-58131615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr9:35101102-35100964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr9:10877631-10877781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr9:3807502-3807665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr9:9491028-9490863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr9:38875339-38875509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr9:1855515-1855328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 162
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr9:33100905-33101075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr9:53608156-53608336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:26828586-26828772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr9:41995949-41995760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr9:18072882-18073073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
140, 40
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr9:22227851-22228045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
146, 39
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr9:4928866-4928659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
150, 61
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr9:8868901-8869109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr9:18002714-18002925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr9:32812583-32812378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr9:58439546-58439753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr9:41653024-41652813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr9:30664543-30664757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr9:35305885-35306099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr9:5238631-5238413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr9:27077016-27077226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr9:36999826-37000045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr9:19542144-19541920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 72
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr9:40604185-40603957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr9:29034804-29035029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr9:5532188-5531944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr9:30749350-30749587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr9:31640083-31640323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr9:34919031-34919258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
156, 49
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr9:4128549-4128780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
139, 48
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr9:10092158-10092392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr9:40105712-40105468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr9:54610996-54611235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr9:54997788-54998028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr9:20738937-20738695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr9:26391003-26390768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr9:20810826-20811067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr9:35359867-35360108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr9:21840310-21840062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
174, 40
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr9:18162920-18163170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr9:49983457-49983707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
150, 60
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr9:22361250-22360989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr9:25958649-25958395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
196, 6
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr9:38692303-38692558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr9:1952034-1952294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr9:3411005-3410758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr9:27697495-27697753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
150, 48
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr9:34742493-34742751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr9:35533716-35533980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr9:9416172-9416423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr9:36827360-36827107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr9:38344129-38343862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr9:48118467-48118717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr9:6225217-6225483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr9:62134385-62134658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
134, 34
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr9:2113769-2114042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
121, 59
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr9:9200490-9200759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr9:13994423-13994131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr9:41317732-41318008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr9:50295788-50296068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr9:648011-647741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr9:15982843-15983108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr9:31077443-31077706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr9:35850134-35849868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr9:47472931-47472650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr9:52505068-52505342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr9:53257825-53258090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr9:41789514-41789243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr9:49764891-49764619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr9:8534448-8534734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr9:63905369-63905651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr9:20318343-20318618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr9:21030551-21030262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr9:49982862-49983135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr9:52689389-52689657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr9:35904516-35904792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr9:5161831-5162098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr9:22114398-22114683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr9:25964589-25964881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr9:35375659-35375378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr9:39577969-39577691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
160, 48
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr9:47875712-47876009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr9:17929007-17928699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
40, 177
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr9:28948087-28947804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr9:49710079-49709782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 149
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr9:5756768-5757060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr9:44914860-44915169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr9:5319864-5319547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr9:6880005-6879704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr9:388780-389093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr9:766915-767227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 41
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr9:23430907-23431227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 61
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr9:5226929-5227257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr9:20416274-20416588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr9:8724031-8723711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
170, 61
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr9:9753160-9753473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr9:50076301-50075981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr9:62657027-62656720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr9:7363262-7362944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr9:5509959-5509640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 49
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr9:5763395-5763716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 61
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr9:5218944-5219259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr9:29684382-29684058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
42, 35
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr9:32732451-32732767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr9:45756595-45756276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr9:50606718-50607033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
147, 47
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr9:63746039-63745727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr9:9443362-9443690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr9:5433870-5433541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr9:8546553-8546239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
152, 49
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr9:8338265-8337935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr9:20091274-20090954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 39
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr9:20848171-20847842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr9:54716386-54716694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
215, 49
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr9:6952325-6952008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 47
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr9:34901880-34902197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
152, 25
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr9:54681737-54681416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 48
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr9:5501086-5500758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr9:41513854-41513538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr9:47869242-47868921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 61
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr9:57896890-57897204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
146, 41
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr9:10144237-10144573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 61
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr9:22151852-22152180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 48
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr9:26404024-26403691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr9:61997360-61997698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:5327489-5327162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:7410017-7409666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:11299461-11299776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 35
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:17410949-17411289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:18342958-18342635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 61
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:32307001-32307327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:54528750-54528418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:55084062-55084397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:56453567-56453244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:58451862-58452173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
328, 61
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr9:64091923-64091583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr9:22443376-22443723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr9:38846114-38846431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr9:5246084-5245756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
184, 46
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr9:34697060-34697397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr9:55074900-55075227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr9:10118430-10118755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 49
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr9:23388443-23388773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 39
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr9:29825271-29824927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 48
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr9:30138361-30138021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
181, 54
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr9:33940842-33940506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr9:46316553-46316881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 62
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr9:50080811-50081140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr9:51620671-51620346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr9:64155621-64155951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
143, 61
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr9:3186377-3186025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr9:6840246-6839893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 61
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr9:9516535-9516851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 43
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr9:11319397-11319735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 38
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr9:31078847-31079180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr9:52407405-52407064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:9723647-9723978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 20
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:10011035-10010713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:15215446-15215789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
91, 61
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:15225055-15225398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
60, 181
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:22318573-22318250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:22638335-22638000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:29184898-29185239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 46
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:36490660-36491003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 35
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:38793254-38792916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:42498064-42497725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr9:52131253-52130913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
99, 25
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:1729441-1729777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:1751569-1751234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 59
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:1950154-1949812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:3782598-3782267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 33
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:8288852-8288515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 48
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:8563076-8562719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:13205335-13205669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
159, 13
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:17310327-17310667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 29
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:19068033-19067681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:22696452-22696120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:26086302-26085955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:28391797-28392129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:31814143-31814489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
137, 48
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:33598216-33597883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:35167403-35167072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:36445857-36445517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
152, 11
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:39681591-39681235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr9:59386542-59386874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
317, 46
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr9:3070188-3070513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr9:4646093-4646427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr9:44831820-44832157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr9:5393286-5392967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr9:52578298-52578647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr9:59013100-59013444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 34
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr9:33823333-33823009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 48
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr9:34957816-34958159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr9:55256314-55256656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 13
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr9:58979636-58979291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:3169285-3169633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
177, 40
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:5836397-5836037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:9199549-9199884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:9552322-9551982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:13169433-13169773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:13670871-13670528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 60
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:15805686-15806034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:17740709-17741049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:17871872-17872215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:20321881-20322199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:24887435-24887097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 6
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:26278938-26279280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:28726488-28726837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 56
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:28747287-28747626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 50
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:28773352-28773032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:29006795-29006451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 28
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:30402185-30402537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:31626384-31626023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
140, 60
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:37017119-37016791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:44710060-44709722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:44822067-44822430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
94, 49
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:45285296-45285647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:52484682-52485020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:56011732-56011395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr9:61739152-61738813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
2-146
               

               
Cow position:
               
chr9:1350211-1350351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr9:64516861-64517088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr9:8997790-8997524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr9:35203118-35202833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr9:48106886-48107162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr9:34762616-34762897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
120, 47
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr9:25922058-25921748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr9:34310268-34309946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr9:62357297-62357616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr9:45141371-45141696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 46
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr9:21459923-21460249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr9:48564329-48563983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 177
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr9:60110467-60110152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr9:63194842-63194509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr9:18381093-18380765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr9:51204959-51204632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 61
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr9:9595720-9596054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 57
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr9:42445748-42446083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr9:20942376-20942718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr9:11192933-11193273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr9:16300336-16300671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr9:34374695-34375027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 26
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr9:50139515-50139182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr9:58133788-58134117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr9:56032094-56032424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 28
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr9:11068235-11068586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr9:55795992-55795650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr9:61022845-61022513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr9:59507314-59507104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
181, 38
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr9:5268789-5268509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr9:37069336-37069642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr9:38961205-38961516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr9:8636885-8636572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr9:64559654-64559983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr9:6933839-6934175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr9:9461422-9461756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr9:1520497-1520842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr9:4267747-4268085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 59
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr9:32676919-32676567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr9:6192226-6192565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr9:46981000-46981332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr9:2718226-2718420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr9:31292920-31292720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
143, 28
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr9:34016326-34016560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr9:18477980-18477744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr9:31361257-31361021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr9:34879495-34879730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
4-243
               

               
Cow position:
               
chr9:56566991-56567229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr9:13221661-13221926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr9:28969852-28970048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr9:8388029-8388224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chr9:36067137-36066939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr9:16497364-16497129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr9:3747378-3747143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 45
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr9:634929-634660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 83
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr9:32238613-32238347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr9:22656715-22656986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 57
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr9:9624797-9625103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
171, 17
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr9:62400185-62399866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
142, 57
               

               
Conread position:
               
5-341
               

               
Cow position:
               
chr9:56773314-56772976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr9:31124692-31125028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr9:63784692-63785014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr9:50667654-50667450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr9:58972261-58972580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
7-123
               

               
Cow position:
               
chr9:33584223-33584336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
7-191
               

               
Cow position:
               
chr9:1084626-1084810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
7-191
               

               
Cow position:
               
chr9:47442856-47443039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-191
               

               
Cow position:
               
chr9:51015683-51015497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-195
               

               
Cow position:
               
chr9:58251775-58251584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr9:47385554-47385739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-202
               

               
Cow position:
               
chr9:27290052-27290246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-202
               

               
Cow position:
               
chr9:29776368-29776563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-203
               

               
Cow position:
               
chr9:40327320-40327516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr9:42426813-42427031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr9:1712255-1712467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr9:11317705-11317479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr9:4192211-4192442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr9:6887499-6887732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr9:35790547-35790319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr9:42208995-42209227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr9:44202173-44201942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr9:177847-177614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr9:764139-763906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr9:2065257-2065024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr9:5796240-5796007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr9:9610968-9610735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr9:23000924-23001157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr9:41032666-41032899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr9:42696887-42697120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr9:43845142-43844909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr9:46874896-46874663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr9:59439880-59440113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:648627-648862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:9119762-9119527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:10283867-10283632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:11289876-11289639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 175
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:13620078-13619843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:32495546-32495311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:41313651-41313886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:42357284-42357047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:49073180-49072945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:54483862-54484098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:59689432-59689663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:60554470-60554704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr9:64013952-64013717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
7-244
               

               
Cow position:
               
chr9:22802747-22802513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
7-252
               

               
Cow position:
               
chr9:20961059-20961291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
7-253
               

               
Cow position:
               
chr9:50702883-50703123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
7-256
               

               
Cow position:
               
chr9:415038-415290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
7-256
               

               
Cow position:
               
chr9:33038229-33038476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
7-257
               

               
Cow position:
               
chr9:32711161-32710913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
7-265
               

               
Cow position:
               
chr9:3387920-3387665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
95, 43
               

               
Conread position:
               
7-269
               

               
Cow position:
               
chr9:41773141-41773406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr9:5531832-5531565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
65, 71
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr9:55534383-55534652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-277
               

               
Cow position:
               
chr9:6339031-6338757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr9:8937377-8937108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr9:35128723-35128435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
7-335
               

               
Cow position:
               
chr9:62724775-62724439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr9:55287665-55287985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 55
               

               
Conread position:
               
7-339
               

               
Cow position:
               
chr9:56087838-56088167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr9:61544878-61544559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr9:40302896-40303238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
7-347
               

               
Cow position:
               
chr9:28983410-28983073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr9:31347183-31346841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
146, 43
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr9:33119653-33119999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 55
               

               
Conread position:
               
8-180
               

               
Cow position:
               
chr9:56012380-56012212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
8-218
               

               
Cow position:
               
chr9:62361001-62361212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
8-277
               

               
Cow position:
               
chr9:1614948-1614678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
8-281
               

               
Cow position:
               
chr9:20989226-20989498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
8-320
               

               
Cow position:
               
chr9:5442224-5441912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
8-336
               

               
Cow position:
               
chr9:36410124-36410442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr9:21888397-21888072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr9:9573563-9573224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr9:10761737-10761958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr9:34911387-34911109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr9:1916514-1916241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr9:64050329-64050656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
9-337
               

               
Cow position:
               
chr9:53762928-53762598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 53
               

               
Conread position:
               
9-342
               

               
Cow position:
               
chr9:44467122-44467441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 53
               

               
Conread position:
               
9-343
               

               
Cow position:
               
chr9:30477557-30477877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
114, 40
               

               
Conread position:
               
9-347
               

               
Cow position:
               
chr9:39428569-39428909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 53
               

               
Conread position:
               
9-349
               

               
Cow position:
               
chr9:5594727-5594394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
10-207
               

               
Cow position:
               
chr9:49403978-49403793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
10-228
               

               
Cow position:
               
chr9:6117920-6118136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
6, 34
               

               
Conread position:
               
10-343
               

               
Cow position:
               
chr9:1938352-1938022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr9:26440571-26440848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
12-198
               

               
Cow position:
               
chr9:32829792-32829967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
168, 38
               

               
Conread position:
               
12-211
               

               
Cow position:
               
chr9:41469634-41469836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr9:3371803-3371544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 174
               

               
Conread position:
               
12-274
               

               
Cow position:
               
chr9:30162387-30162123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
93, 63
               

               
Conread position:
               
12-339
               

               
Cow position:
               
chr9:28354742-28354419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
13-337
               

               
Cow position:
               
chr9:41283250-41282919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
13-343
               

               
Cow position:
               
chr9:42062339-42061996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
13-348
               

               
Cow position:
               
chr9:64106130-64105795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
14-188
               

               
Cow position:
               
chr9:49206177-49206351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
14-226
               

               
Cow position:
               
chr9:58734597-58734383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
14-238
               

               
Cow position:
               
chr9:1997360-1997140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
14-249
               

               
Cow position:
               
chr9:2022916-2022685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
209, 47
               

               
Conread position:
               
14-249
               

               
Cow position:
               
chr9:29092026-29091783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 48
               

               
Conread position:
               
14-253
               

               
Cow position:
               
chr9:29108760-29108524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
14-298
               

               
Cow position:
               
chr9:4861614-4861327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
110, 48
               

               
Conread position:
               
14-299
               

               
Cow position:
               
chr9:24997292-24997575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
14-299
               

               
Cow position:
               
chr9:42264443-42264155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
14-337
               

               
Cow position:
               
chr9:11313285-11313610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
14-343
               

               
Cow position:
               
chr9:27279540-27279207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
14-344
               

               
Cow position:
               
chr9:1973164-1972845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
14-348
               

               
Cow position:
               
chr9:20406860-20406547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
15-320
               

               
Cow position:
               
chr9:1532111-1532413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
212, 47
               

               
Conread position:
               
15-348
               

               
Cow position:
               
chr9:48628251-48627920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 8
               

               
Conread position:
               
16-228
               

               
Cow position:
               
chr9:1879596-1879393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
16-287
               

               
Cow position:
               
chr9:44833745-44834009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 70
               

               
Conread position:
               
16-288
               

               
Cow position:
               
chr9:59795059-59795335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
16-290
               

               
Cow position:
               
chr9:53211277-53211540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
16-323
               

               
Cow position:
               
chr9:32371541-32371833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 34
               

               
Conread position:
               
16-344
               

               
Cow position:
               
chr9:10308788-10309097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
16-344
               

               
Cow position:
               
chr9:18216880-18217202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
16-348
               

               
Cow position:
               
chr9:17799850-17799527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 23
               

               
Conread position:
               
17-183
               

               
Cow position:
               
chr9:42585405-42585574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
17-348
               

               
Cow position:
               
chr9:64637764-64637443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
323, 46
               

               
Conread position:
               
18-180
               

               
Cow position:
               
chr9:51011322-51011486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
19-277
               

               
Cow position:
               
chr9:43207156-43207410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
22-240
               

               
Cow position:
               
chr9:30195427-30195215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
22-329
               

               
Cow position:
               
chr9:43444009-43443716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
22-344
               

               
Cow position:
               
chr9:33093168-33092851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
28-147
               

               
Cow position:
               
chr9:23970714-23970831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
28-325
               

               
Cow position:
               
chr9:62907838-62908103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr9:16811451-16811756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr9:62668464-62668148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
28-348
               

               
Cow position:
               
chr9:6397569-6397894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
28-348
               

               
Cow position:
               
chr9:8920206-8919896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
28-348
               

               
Cow position:
               
chr9:61303215-61302895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
29-277
               

               
Cow position:
               
chr9:4512698-4512452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
29-278
               

               
Cow position:
               
chr9:214257-214498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
29-310
               

               
Cow position:
               
chr9:11201796-11201521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
29-310
               

               
Cow position:
               
chr9:11364099-11363828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
29-343
               

               
Cow position:
               
chr9:32816927-32817242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
29-348
               

               
Cow position:
               
chr9:15006544-15006859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
30-325
               

               
Cow position:
               
chr9:19493253-19493550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
31-342
               

               
Cow position:
               
chr9:3738013-3738325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
32-343
               

               
Cow position:
               
chr9:52637952-52638269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
32-348
               

               
Cow position:
               
chr9:8998562-8998244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
34-277
               

               
Cow position:
               
chr9:47500001-47500248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr9:55118285-55117992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
151, 28
               

               
Conread position:
               
35-287
               

               
Cow position:
               
chr9:8548020-8547764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
36-251
               

               
Cow position:
               
chr9:8525040-8524831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
36-319
               

               
Cow position:
               
chr9:6686074-6685821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
36-328
               

               
Cow position:
               
chr9:19903269-19902995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
36-344
               

               
Cow position:
               
chr9:50543213-50543530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
39-328
               

               
Cow position:
               
chr9:12225779-12226064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
39-334
               

               
Cow position:
               
chr9:10650104-10650394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
39-335
               

               
Cow position:
               
chr9:40542320-40542042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
39-336
               

               
Cow position:
               
chr9:7634473-7634176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
39-340
               

               
Cow position:
               
chr9:14796572-14796869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
39-342
               

               
Cow position:
               
chr9:37678088-37677793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
39-344
               

               
Cow position:
               
chr9:9654112-9654410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 7
               

               
Conread position:
               
39-348
               

               
Cow position:
               
chr9:824161-823851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
39-348
               

               
Cow position:
               
chr9:34287001-34286690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
40-239
               

               
Cow position:
               
chr9:55893256-55893058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
40-250
               

               
Cow position:
               
chr9:40543122-40543334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
40-276
               

               
Cow position:
               
chr9:25805034-25804797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
40-277
               

               
Cow position:
               
chr9:17676921-17677146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
40-330
               

               
Cow position:
               
chr9:19714273-19713991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
40-334
               

               
Cow position:
               
chr9:33218752-33219042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
40-342
               

               
Cow position:
               
chr9:53138931-53139233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
40-344
               

               
Cow position:
               
chr9:4340970-4341262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
40-349
               

               
Cow position:
               
chr9:33237592-33237287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
43-342
               

               
Cow position:
               
chr9:12910202-12910504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 139
               

               
Conread position:
               
47-262
               

               
Cow position:
               
chr9:41853638-41853411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
50-320
               

               
Cow position:
               
chr9:41679935-41679668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
50-336
               

               
Cow position:
               
chr9:47906090-47906374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
50-343
               

               
Cow position:
               
chr9:26507315-26507015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 23
               

               
Conread position:
               
50-344
               

               
Cow position:
               
chr9:30124110-30123826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
50-347
               

               
Cow position:
               
chr9:1371122-1370823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
50-348
               

               
Cow position:
               
chr9:19555564-19555271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
51-211
               

               
Cow position:
               
chr9:14358353-14358193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 131
               

               
Conread position:
               
51-218
               

               
Cow position:
               
chr9:49279665-49279487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
51-219
               

               
Cow position:
               
chr9:34666607-34666442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
51-238
               

               
Cow position:
               
chr9:62151290-62151110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
51-321
               

               
Cow position:
               
chr9:60027386-60027117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
51-329
               

               
Cow position:
               
chr9:43871168-43870887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
51-336
               

               
Cow position:
               
chr9:9402987-9403275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
51-341
               

               
Cow position:
               
chr9:34689414-34689696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
53-211
               

               
Cow position:
               
chr9:60037840-60037680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
53-329
               

               
Cow position:
               
chr9:9823319-9823594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
53-335
               

               
Cow position:
               
chr9:49292956-49293237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
53-344
               

               
Cow position:
               
chr9:9405864-9406156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 9
               

               
Conread position:
               
53-348
               

               
Cow position:
               
chr9:56065735-56065458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
56-239
               

               
Cow position:
               
chr9:31270965-31270782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
91, 123
               

               
Conread position:
               
56-342
               

               
Cow position:
               
chr9:47445841-47446116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
58-316
               

               
Cow position:
               
chr9:24873016-24872761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
61-334
               

               
Cow position:
               
chr9:25557145-25556879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 7
               

               
Conread position:
               
61-348
               

               
Cow position:
               
chr9:6596059-6596333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 7
               

               
Conread position:
               
63-277
               

               
Cow position:
               
chr9:41518439-41518662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
63-291
               

               
Cow position:
               
chr9:43875543-43875769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
63-316
               

               
Cow position:
               
chr9:44921212-44921474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
83, 256
               

               
Conread position:
               
63-323
               

               
Cow position:
               
chr9:58670907-58670661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
63-324
               

               
Cow position:
               
chr9:34468406-34468661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
237, 37
               

               
Conread position:
               
63-329
               

               
Cow position:
               
chr9:55321816-55321548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
63-337
               

               
Cow position:
               
chr9:3774341-3774069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
63-342
               

               
Cow position:
               
chr9:22433753-22434029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
63-343
               

               
Cow position:
               
chr9:8901045-8901328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
63-344
               

               
Cow position:
               
chr9:31638462-31638760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 209
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr9:11168909-11168628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr9:12281148-12280865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr9:40215422-40215139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr9:41728435-41728152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
65-337
               

               
Cow position:
               
chr9:17518312-17518585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 117
               

               
Conread position:
               
65-344
               

               
Cow position:
               
chr9:60394874-60395151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
88, 115
               

               
Conread position:
               
67-228
               

               
Cow position:
               
chr9:4323983-4324144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 118
               

               
Conread position:
               
67-338
               

               
Cow position:
               
chr9:62442465-62442193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
68-288
               

               
Cow position:
               
chr9:25546810-25546593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
69-277
               

               
Cow position:
               
chr9:27029531-27029741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
70-277
               

               
Cow position:
               
chr9:16121340-16121132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
70-308
               

               
Cow position:
               
chr9:32115438-32115666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
70-343
               

               
Cow position:
               
chr9:35027994-35028266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
71-305
               

               
Cow position:
               
chr9:43937110-43936881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
85, 108
               

               
Conread position:
               
71-329
               

               
Cow position:
               
chr9:6851897-6852155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 174
               

               
Conread position:
               
71-343
               

               
Cow position:
               
chr9:26477387-26477113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
72-344
               

               
Cow position:
               
chr9:50202739-50202460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
86, 108
               

               
Conread position:
               
73-342
               

               
Cow position:
               
chr9:20579437-20579692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
73-343
               

               
Cow position:
               
chr9:31216257-31215980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
73-343
               

               
Cow position:
               
chr9:51720733-51720998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
73-347
               

               
Cow position:
               
chr9:11123316-11123587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
73-348
               

               
Cow position:
               
chr9:5263669-5263394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
73-348
               

               
Cow position:
               
chr9:5456005-5456280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
79-226
               

               
Cow position:
               
chr9:42509277-42509131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
79-347
               

               
Cow position:
               
chr9:26344808-26345077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
80-339
               

               
Cow position:
               
chr9:11303916-11304174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
80-349
               

               
Cow position:
               
chr9:27356082-27355813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
80-349
               

               
Cow position:
               
chr9:27358868-27358599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
81-277
               

               
Cow position:
               
chr9:10905653-10905853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
81-332
               

               
Cow position:
               
chr9:36843948-36843702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
82-250
               

               
Cow position:
               
chr9:9086357-9086181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
82-287
               

               
Cow position:
               
chr9:62940882-62941079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
83-324
               

               
Cow position:
               
chr9:3378903-3378671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr9:33697185-33696942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
84-340
               

               
Cow position:
               
chr9:34204288-34204030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
64, 46
               

               
Conread position:
               
84-343
               

               
Cow position:
               
chr9:52267599-52267857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
63, 164
               

               
Conread position:
               
84-345
               

               
Cow position:
               
chr9:5077563-5077809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
94, 49
               

               
Conread position:
               
87-328
               

               
Cow position:
               
chr9:10819679-10819915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
89-344
               

               
Cow position:
               
chr9:39011324-39011572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
89-345
               

               
Cow position:
               
chr9:33114498-33114242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
89-348
               

               
Cow position:
               
chr9:43757690-43757433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 61
               

               
Conread position:
               
91-324
               

               
Cow position:
               
chr9:63896686-63896459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
91-348
               

               
Cow position:
               
chr9:41394504-41394758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
230, 57
               

               
Conread position:
               
92-339
               

               
Cow position:
               
chr9:7953049-7952802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
237, 99
               

               
Conread position:
               
92-348
               

               
Cow position:
               
chr9:5342105-5342354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
93-343
               

               
Cow position:
               
chr9:32669799-32670049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
94-334
               

               
Cow position:
               
chr9:52839739-52839972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
95-289
               

               
Cow position:
               
chr9:47590838-47591029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
95-338
               

               
Cow position:
               
chr9:26310649-26310412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
95-340
               

               
Cow position:
               
chr9:42478322-42478581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
51, 99
               

               
Conread position:
               
95-343
               

               
Cow position:
               
chr9:38624483-38624726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
95-344
               

               
Cow position:
               
chr9:28686538-28686284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
95-348
               

               
Cow position:
               
chr9:4262946-4263197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 123
               

               
Conread position:
               
95-348
               

               
Cow position:
               
chr9:8628776-8629020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
95-348
               

               
Cow position:
               
chr9:34284094-34283845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
96-342
               

               
Cow position:
               
chr9:35105645-35105891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
97-322
               

               
Cow position:
               
chr9:1867594-1867370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
100-287
               

               
Cow position:
               
chr9:1756003-1756191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
100-290
               

               
Cow position:
               
chr9:60081047-60080853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
100-348
               

               
Cow position:
               
chr9:5399279-5399025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
101-287
               

               
Cow position:
               
chr9:11969328-11969140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
101-307
               

               
Cow position:
               
chr9:41486100-41486308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
52, 185
               

               
Conread position:
               
103-317
               

               
Cow position:
               
chr9:43013862-43013651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
105-343
               

               
Cow position:
               
chr9:44396796-44396560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
106-340
               

               
Cow position:
               
chr9:53326615-53326851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 118
               

               
Conread position:
               
106-344
               

               
Cow position:
               
chr9:13743797-13744032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
106-344
               

               
Cow position:
               
chr9:40005611-40005372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 215
               

               
Conread position:
               
106-348
               

               
Cow position:
               
chr9:6189236-6189472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
106-348
               

               
Cow position:
               
chr9:31359736-31359497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
107-316
               

               
Cow position:
               
chr9:55532954-55532739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
107-337
               

               
Cow position:
               
chr9:52513318-52513544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
107-340
               

               
Cow position:
               
chr9:37934102-37934335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 71
               

               
Conread position:
               
107-348
               

               
Cow position:
               
chr9:1877871-1878107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 75
               

               
Conread position:
               
109-287
               

               
Cow position:
               
chr9:51131595-51131414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 75
               

               
Conread position:
               
110-348
               

               
Cow position:
               
chr9:34410264-34410501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
111-343
               

               
Cow position:
               
chr9:20755622-20755858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
22, 159
               

               
Conread position:
               
112-348
               

               
Cow position:
               
chr9:4630234-4630001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
116-314
               

               
Cow position:
               
chr9:49689082-49688890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
116-348
               

               
Cow position:
               
chr9:17840554-17840787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
116-348
               

               
Cow position:
               
chr9:29339199-29339421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
117-347
               

               
Cow position:
               
chr9:3353475-3353256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
117-348
               

               
Cow position:
               
chr9:50310649-50310871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
212, 54
               

               
Conread position:
               
119-344
               

               
Cow position:
               
chr9:44770080-44770294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
120-337
               

               
Cow position:
               
chr9:21080684-21080469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
28, 150
               

               
Conread position:
               
121-329
               

               
Cow position:
               
chr9:3343863-3343661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
121-339
               

               
Cow position:
               
chr9:53109373-53109150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
36, 127
               

               
Conread position:
               
123-337
               

               
Cow position:
               
chr9:52598605-52598817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
123-348
               

               
Cow position:
               
chr9:9311978-9311751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
124-348
               

               
Cow position:
               
chr9:33584565-33584792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
125-316
               

               
Cow position:
               
chr9:20465843-20466035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
125-338
               

               
Cow position:
               
chr9:54493254-54493038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
125-344
               

               
Cow position:
               
chr9:38941315-38941535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
126-337
               

               
Cow position:
               
chr9:38645227-38645440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
127-344
               

               
Cow position:
               
chr9:64064246-64064466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
128-348
               

               
Cow position:
               
chr9:23955870-23956085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
129-348
               

               
Cow position:
               
chr9:45171106-45171331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
130-347
               

               
Cow position:
               
chr9:33838201-33838423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
134-338
               

               
Cow position:
               
chr9:9460081-9459887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
122, 39
               

               
Conread position:
               
134-342
               

               
Cow position:
               
chr9:21383847-21384049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
174, 43
               

               
Conread position:
               
135-329
               

               
Cow position:
               
chr9:28754926-28754731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 182
               

               
Conread position:
               
135-341
               

               
Cow position:
               
chr9:32981965-32982175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
139-266
               

               
Cow position:
               
chr9:1893945-1894069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 41
               

               
Conread position:
               
139-323
               

               
Cow position:
               
chr9:21387523-21387338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
140-325
               

               
Cow position:
               
chr9:29194921-29195108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
143-345
               

               
Cow position:
               
chr9:41781752-41781552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
144-332
               

               
Cow position:
               
chr9:54615206-54615391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
144-337
               

               
Cow position:
               
chr9:9686319-9686508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-341
               

               
Cow position:
               
chr9:59997938-59998132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
146-339
               

               
Cow position:
               
chr9:18827961-18828152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
146-343
               

               
Cow position:
               
chr9:6954153-6954352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
146-348
               

               
Cow position:
               
chr9:25400103-25400303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
147-330
               

               
Cow position:
               
chr9:8834037-8834216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
148-341
               

               
Cow position:
               
chr9:53750863-53751062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
148-344
               

               
Cow position:
               
chr9:37199215-37199025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
151-348
               

               
Cow position:
               
chr9:34024790-34024591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 176
               

               
Conread position:
               
152-343
               

               
Cow position:
               
chr9:43342417-43342229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
155-343
               

               
Cow position:
               
chr9:33542141-33541953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
156-347
               

               
Cow position:
               
chr9:7805879-7806069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
173, 21
               

               
Conread position:
               
157-342
               

               
Cow position:
               
chr9:50382242-50382423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
159-332
               

               
Cow position:
               
chr9:30780195-30780027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
159-347
               

               
Cow position:
               
chr9:63361635-63361826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
160-337
               

               
Cow position:
               
chr9:23797318-23797139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
160-344
               

               
Cow position:
               
chr9:61351259-61351441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
160-347
               

               
Cow position:
               
chr9:41785291-41785106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
160-348
               

               
Cow position:
               
chr9:5110940-5110748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 147
               

               
Conread position:
               
162-316
               

               
Cow position:
               
chr9:38289247-38289397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
164-321
               

               
Cow position:
               
chr9:56204884-56204730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
168-329
               

               
Cow position:
               
chr9:24652476-24652316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-348
               

               
Cow position:
               
chr9:49545296-49545473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
169, 19
               

               
Conread position:
               
169-348
               

               
Cow position:
               
chr9:43159824-43159645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
175-339
               

               
Cow position:
               
chr9:23970830-23970995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
175-341
               

               
Cow position:
               
chr9:9503149-9502989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
175-344
               

               
Cow position:
               
chr9:47214479-47214647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
177-335
               

               
Cow position:
               
chr9:34484660-34484500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
180-324
               

               
Cow position:
               
chr9:31098823-31098969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
180-348
               

               
Cow position:
               
chr9:58131892-58132057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
180-349
               

               
Cow position:
               
chr9:19758780-19758613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
181-344
               

               
Cow position:
               
chr9:55494926-55495089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-314
               

               
Cow position:
               
chr9:54932838-54932968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
182-324
               

               
Cow position:
               
chr9:44584652-44584510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-344
               

               
Cow position:
               
chr9:5104344-5104508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
145, 80
               

               
Conread position:
               
182-344
               

               
Cow position:
               
chr9:39758577-39758415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-347
               

               
Cow position:
               
chr9:33347431-33347596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-348
               

               
Cow position:
               
chr9:41964676-41964841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
182-348
               

               
Cow position:
               
chr9:58368938-58369101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
183-334
               

               
Cow position:
               
chr9:4580346-4580495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
183-348
               

               
Cow position:
               
chr9:22466830-22466669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
183-348
               

               
Cow position:
               
chr9:36628176-36628014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
183-348
               

               
Cow position:
               
chr9:55529853-55529695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
183-349
               

               
Cow position:
               
chr9:52518765-52518929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
54, 116
               

               
Conread position:
               
184-306
               

               
Cow position:
               
chr9:38799429-38799551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
184-337
               

               
Cow position:
               
chr9:33151799-33151646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
184-342
               

               
Cow position:
               
chr9:52763703-52763860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
185-329
               

               
Cow position:
               
chr9:52828713-52828568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
185-341
               

               
Cow position:
               
chr9:56827537-56827376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
185-348
               

               
Cow position:
               
chr9:57131551-57131388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-347
               

               
Cow position:
               
chr9:42586501-42586663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
186-348
               

               
Cow position:
               
chr9:4241461-4241299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
105, 146
               

               
Conread position:
               
187-316
               

               
Cow position:
               
chr9:904248-904370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
187-347
               

               
Cow position:
               
chr9:49402704-49402542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 6
               

               
Conread position:
               
187-348
               

               
Cow position:
               
chr9:22440428-22440581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
188-344
               

               
Cow position:
               
chr9:25375683-25375837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
189-344
               

               
Cow position:
               
chr9:16137290-16137445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
191-344
               

               
Cow position:
               
chr9:59699497-59699649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
193-344
               

               
Cow position:
               
chr9:55354659-55354508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
194-344
               

               
Cow position:
               
chr9:1733391-1733241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
195-334
               

               
Cow position:
               
chr9:13742569-13742430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
195-337
               

               
Cow position:
               
chr9:27345538-27345679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
195-348
               

               
Cow position:
               
chr9:35832573-35832725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
195-348
               

               
Cow position:
               
chr9:39149125-39148974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
196-341
               

               
Cow position:
               
chr9:61547743-61547602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
198-344
               

               
Cow position:
               
chr9:6293638-6293491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
198-348
               

               
Cow position:
               
chr9:11098413-11098559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
199-329
               

               
Cow position:
               
chr9:34014207-34014337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
199-344
               

               
Cow position:
               
chr9:24243679-24243826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
199-348
               

               
Cow position:
               
chr9:22165671-22165825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
121, 112
               

               
Conread position:
               
200-325
               

               
Cow position:
               
chr9:3924484-3924358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
91, 52
               

               
Conread position:
               
203-328
               

               
Cow position:
               
chr9:35793715-35793590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
205-337
               

               
Cow position:
               
chr9:3847438-3847306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-344
               

               
Cow position:
               
chr9:34065513-34065655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
207-333
               

               
Cow position:
               
chr9:18226701-18226827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
207-344
               

               
Cow position:
               
chr9:35306312-35306449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
208-348
               

               
Cow position:
               
chr9:43202367-43202227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
211-348
               

               
Cow position:
               
chr9:34707282-34707418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
212-340
               

               
Cow position:
               
chr9:2951476-2951607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
212-348
               

               
Cow position:
               
chr9:42508861-42508720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
212-349
               

               
Cow position:
               
chr9:40603697-40603558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
213-344
               

               
Cow position:
               
chr9:34079070-34079198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
214-342
               

               
Cow position:
               
chr9:59897616-59897492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
214-348
               

               
Cow position:
               
chr9:19771393-19771253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
215-342
               

               
Cow position:
               
chr9:44944452-44944578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
215-348
               

               
Cow position:
               
chr9:12773716-12773586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
216-328
               

               
Cow position:
               
chr9:49830869-49830758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
216-337
               

               
Cow position:
               
chr9:19718315-19718435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
216-347
               

               
Cow position:
               
chr9:26394325-26394455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
217-337
               

               
Cow position:
               
chr9:24079326-24079206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
217-337
               

               
Cow position:
               
chr9:26277852-26277735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
218-340
               

               
Cow position:
               
chr9:53496731-53496849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
222-335
               

               
Cow position:
               
chr9:53045327-53045440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
223-343
               

               
Cow position:
               
chr9:40984523-40984403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
223-348
               

               
Cow position:
               
chr9:52998362-52998488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 52
               

               
Conread position:
               
224-348
               

               
Cow position:
               
chr9:32052293-32052169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
225-336
               

               
Cow position:
               
chr9:32773229-32773118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
225-337
               

               
Cow position:
               
chr9:23403834-23403722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
228-344
               

               
Cow position:
               
chr9:46190155-46190039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-348
               

               
Cow position:
               
chr9:48900825-48900947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
239-344
               

               
Cow position:
               
chr9:34265097-34264990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
242-342
               

               
Cow position:
               
chr9:23840395-23840495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.