Cow genome map

Conread name: rgul0112_n14.y1

Conread position: 1-124
Cow position: chrX:48536845-48536724 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 1-136
Cow position: chrX:42855229-42855365 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 61

Conread position: 1-151
Cow position: chrX:4123656-4123803 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 46

Conread position: 1-153
Cow position: chrX:44731415-44731565 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 1-157
Cow position: chrX:46430037-46429887 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 1-158
Cow position: chrX:24149460-24149615 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 143, 40

Conread position: 1-171
Cow position: chrX:7513335-7513497 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 1-175
Cow position: chrX:21665773-21665603 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 46

Conread position: 1-179
Cow position: chrX:41403793-41403974 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 48

Conread position: 1-179
Cow position: chrX:41410341-41410522 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 48

Conread position: 1-184
Cow position: chrX:19019290-19019105 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 61

Conread position: 1-186
Cow position: chrX:46315560-46315376 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 61

Conread position: 1-188
Cow position: chrX:35609807-35609993 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 99, 48

Conread position: 1-191
Cow position: chrX:17271468-17271275 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 61

Conread position: 1-192
Cow position: chrX:31256688-31256874 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 147, 48

Conread position: 1-192
Cow position: chrX:42339115-42338942 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 1-194
Cow position: chrX:1505533-1505720 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 100, 13

Conread position: 1-198
Cow position: chrX:28847058-28846866 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 49

Conread position: 1-207
Cow position: chrX:4750480-4750281 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 142, 12

Conread position: 1-207
Cow position: chrX:20582851-20583044 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 176, 49

Conread position: 1-208
Cow position: chrX:2029210-2029415 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 144, 61

Conread position: 1-208
Cow position: chrX:14924820-14925024 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 97, 48

Conread position: 1-208
Cow position: chrX:44834995-44834782 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 67

Conread position: 1-212
Cow position: chrX:17908463-17908261 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 147, 42

Conread position: 1-213
Cow position: chrX:48370918-48371119 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 168, 61

Conread position: 1-218
Cow position: chrX:30833025-30832819 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 1-218
Cow position: chrX:38439295-38439514 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 144, 61

Conread position: 1-220
Cow position: chrX:37048759-37048546 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 146, 61

Conread position: 1-221
Cow position: chrX:9997513-9997298 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 146, 38

Conread position: 1-221
Cow position: chrX:41743733-41743950 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 101, 48

Conread position: 1-223
Cow position: chrX:26285800-26286019 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 46

Conread position: 1-225
Cow position: chrX:25237997-25238219 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 46

Conread position: 1-226
Cow position: chrX:32128160-32127951 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 32

Conread position: 1-229
Cow position: chrX:42086682-42086890 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 146, 61

Conread position: 1-233
Cow position: chrX:20752080-20752303 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 46

Conread position: 1-235
Cow position: chrX:15139724-15139497 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 141, 48

Conread position: 1-235
Cow position: chrX:19015263-19015487 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 184, 33

Conread position: 1-235
Cow position: chrX:39938702-39938473 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 151, 48

Conread position: 1-235
Cow position: chrX:42461925-42461694 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 146, 61

Conread position: 1-235
Cow position: chrX:42994435-42994663 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 101, 20

Conread position: 1-237
Cow position: chrX:8899845-8900079 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 61

Conread position: 1-237
Cow position: chrX:40647798-40648038 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 48, 82

Conread position: 1-238
Cow position: chrX:9953962-9954192 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 100, 60

Conread position: 1-238
Cow position: chrX:23970209-23970432 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 179, 46

Conread position: 1-239
Cow position: chrX:9855121-9855352 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 100, 61

Conread position: 1-240
Cow position: chrX:42874798-42875038 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 61

Conread position: 1-242
Cow position: chrX:41198925-41199165 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 74

Conread position: 1-245
Cow position: chrX:25232411-25232653 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 49

Conread position: 1-245
Cow position: chrX:36961456-36961701 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 61

Conread position: 1-245
Cow position: chrX:41167144-41166902 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 95, 46

Conread position: 1-245
Cow position: chrX:48035248-48035485 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 146, 61

Conread position: 1-249
Cow position: chrX:12018096-12018356 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 37

Conread position: 1-249
Cow position: chrX:13265799-13265567 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 165, 49

Conread position: 1-250
Cow position: chrX:19188757-19188996 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 95, 61

Conread position: 1-252
Cow position: chrX:14900901-14900666 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 146, 49

Conread position: 1-252
Cow position: chrX:36778228-36778475 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 104, 61

Conread position: 1-253
Cow position: chrX:26876062-26875813 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 40

Conread position: 1-258
Cow position: chrX:6234628-6234376 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 95, 46

Conread position: 1-259
Cow position: chrX:678747-678481 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 61

Conread position: 1-264
Cow position: chrX:11589768-11589509 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 100, 27

Conread position: 1-266
Cow position: chrX:37540945-37541198 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 98, 55

Conread position: 1-272
Cow position: chrX:20709892-20710161 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 144, 61

Conread position: 1-276
Cow position: chrX:48044379-48044107 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 37, 62

Conread position: 1-277
Cow position: chrX:11844422-11844149 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 100, 22

Conread position: 1-277
Cow position: chrX:27514689-27514950 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 61

Conread position: 1-277
Cow position: chrX:32020301-32020042 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 47

Conread position: 1-277
Cow position: chrX:38935102-38935371 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 100, 52

Conread position: 1-277
Cow position: chrX:40183529-40183262 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 97, 61

Conread position: 1-277
Cow position: chrX:40809507-40809785 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 100, 40

Conread position: 1-277
Cow position: chrX:45404013-45403733 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 100, 61

Conread position: 1-277
Cow position: chrX:48195220-48194943 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 48

Conread position: 1-282
Cow position: chrX:29876246-29875980 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 1-285
Cow position: chrX:15596858-15597127 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 100, 61

Conread position: 1-285
Cow position: chrX:16541857-16541557 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 48

Conread position: 1-285
Cow position: chrX:21064107-21064383 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 20

Conread position: 1-285
Cow position: chrX:22812881-22813162 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 61

Conread position: 1-285
Cow position: chrX:45993039-45993330 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 62

Conread position: 1-286
Cow position: chrX:2467700-2467985 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 98, 61

Conread position: 1-288
Cow position: chrX:40116242-40116518 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 276, 42

Conread position: 1-289
Cow position: chrX:1055569-1055277 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 45

Conread position: 1-289
Cow position: chrX:21004502-21004788 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 145, 61

Conread position: 1-290
Cow position: chrX:7646081-7646356 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 1-290
Cow position: chrX:26625856-26625566 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 132

Conread position: 1-290
Cow position: chrX:31260809-31260509 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 144, 61

Conread position: 1-290
Cow position: chrX:31949110-31948830 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 100, 49

Conread position: 1-291
Cow position: chrX:7508960-7509245 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 10

Conread position: 1-291
Cow position: chrX:13912901-13913181 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 49

Conread position: 1-291
Cow position: chrX:27680222-27680504 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 49

Conread position: 1-299
Cow position: chrX:24132331-24132037 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 121, 61

Conread position: 1-299
Cow position: chrX:25338000-25338301 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 110, 61

Conread position: 1-299
Cow position: chrX:38936521-38936814 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 156, 61

Conread position: 1-299
Cow position: chrX:43049165-43049445 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 95, 60

Conread position: 1-299
Cow position: chrX:48652906-48652607 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 98, 60

Conread position: 1-304
Cow position: chrX:47362791-47362504 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 64

Conread position: 1-315
Cow position: chrX:19690038-19690345 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 126, 61

Conread position: 1-315
Cow position: chrX:47248964-47248648 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 176, 62

Conread position: 1-316
Cow position: chrX:917551-917237 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 111

Conread position: 1-316
Cow position: chrX:10412168-10411853 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 61

Conread position: 1-316
Cow position: chrX:17541784-17542089 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 177, 61

Conread position: 1-317
Cow position: chrX:27176499-27176181 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 67

Conread position: 1-318
Cow position: chrX:35273173-35273497 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 61

Conread position: 1-320
Cow position: chrX:11939106-11938797 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 40

Conread position: 1-320
Cow position: chrX:37232230-37232542 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 61

Conread position: 1-320
Cow position: chrX:47481620-47481931 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 97, 50

Conread position: 1-321
Cow position: chrX:1514580-1514283 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 98, 47

Conread position: 1-321
Cow position: chrX:11455233-11454913 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 43

Conread position: 1-323
Cow position: chrX:37119420-37119731 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 147, 25

Conread position: 1-324
Cow position: chrX:11073368-11073052 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 40

Conread position: 1-324
Cow position: chrX:17662776-17662459 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 61

Conread position: 1-325
Cow position: chrX:8925526-8925839 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 46

Conread position: 1-325
Cow position: chrX:35224120-35224435 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 11

Conread position: 1-325
Cow position: chrX:37910273-37910584 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 176, 24

Conread position: 1-325
Cow position: chrX:39558526-39558209 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 49

Conread position: 1-326
Cow position: chrX:31340525-31340853 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 61

Conread position: 1-327
Cow position: chrX:37574677-37574983 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 40

Conread position: 1-328
Cow position: chrX:17964702-17964379 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 215
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 122, 61

Conread position: 1-329
Cow position: chrX:44961568-44961895 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 104, 61

Conread position: 1-329
Cow position: chrX:45110476-45110800 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 61

Conread position: 1-333
Cow position: chrX:5900278-5900610 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 57, 184

Conread position: 1-334
Cow position: chrX:1499490-1499816 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 46

Conread position: 1-334
Cow position: chrX:20801600-20801919 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 321, 21

Conread position: 1-334
Cow position: chrX:42492694-42492375 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 98, 49

Conread position: 1-335
Cow position: chrX:9416872-9416534 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 146, 40

Conread position: 1-335
Cow position: chrX:15007330-15007000 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 25

Conread position: 1-335
Cow position: chrX:17042511-17042831 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 49

Conread position: 1-335
Cow position: chrX:42470116-42469792 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 46

Conread position: 1-336
Cow position: chrX:1616227-1615895 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 61

Conread position: 1-336
Cow position: chrX:15147366-15147045 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 95, 11

Conread position: 1-336
Cow position: chrX:41238545-41238204 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 98

Conread position: 1-337
Cow position: chrX:6544077-6544406 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 40

Conread position: 1-337
Cow position: chrX:23091702-23092025 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 49

Conread position: 1-337
Cow position: chrX:31311846-31312181 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 61

Conread position: 1-337
Cow position: chrX:40557855-40557524 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 35

Conread position: 1-339
Cow position: chrX:9041409-9041089 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 193, 61

Conread position: 1-339
Cow position: chrX:9201367-9201701 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-341
Cow position: chrX:151722-152056 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 101, 21

Conread position: 1-341
Cow position: chrX:8797068-8797405 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 61

Conread position: 1-341
Cow position: chrX:13647963-13647629 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 35

Conread position: 1-341
Cow position: chrX:32623403-32623726 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 183, 61

Conread position: 1-341
Cow position: chrX:33493595-33493933 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-341
Cow position: chrX:33639792-33640131 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 97, 48

Conread position: 1-341
Cow position: chrX:41884597-41884256 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-342
Cow position: chrX:9425921-9425595 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 317, 61

Conread position: 1-342
Cow position: chrX:11717962-11717626 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 41

Conread position: 1-342
Cow position: chrX:16416327-16416665 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 95, 61

Conread position: 1-342
Cow position: chrX:20697787-20697454 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 74, 34

Conread position: 1-342
Cow position: chrX:27174816-27175155 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 48

Conread position: 1-342
Cow position: chrX:31436303-31436631 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-342
Cow position: chrX:35268708-35269018 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 1-342
Cow position: chrX:37489551-37489877 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 101, 46

Conread position: 1-342
Cow position: chrX:37836408-37836735 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 227
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 61

Conread position: 1-343
Cow position: chrX:4633030-4632697 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 95, 39

Conread position: 1-343
Cow position: chrX:6278685-6278340 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 61

Conread position: 1-343
Cow position: chrX:7721805-7722146 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 63

Conread position: 1-343
Cow position: chrX:10831676-10831330 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 60

Conread position: 1-343
Cow position: chrX:17231555-17231894 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 146, 76

Conread position: 1-343
Cow position: chrX:17888585-17888265 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 139, 18

Conread position: 1-343
Cow position: chrX:18695099-18694770 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 49

Conread position: 1-343
Cow position: chrX:20340070-20339736 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 1-343
Cow position: chrX:25035567-25035224 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 90, 183

Conread position: 1-343
Cow position: chrX:27509199-27508867 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 145, 49

Conread position: 1-343
Cow position: chrX:30963051-30962718 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 102, 35

Conread position: 1-343
Cow position: chrX:31489332-31489678 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 56, 105

Conread position: 1-343
Cow position: chrX:33466434-33466781 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 137, 38

Conread position: 1-343
Cow position: chrX:34401818-34402164 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 35

Conread position: 1-343
Cow position: chrX:34543608-34543942 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 13

Conread position: 1-343
Cow position: chrX:34554549-34554881 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 106, 43

Conread position: 1-343
Cow position: chrX:36067840-36068177 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 49

Conread position: 1-343
Cow position: chrX:38549269-38549605 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 61

Conread position: 1-343
Cow position: chrX:41879114-41878776 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 49

Conread position: 1-343
Cow position: chrX:44054622-44054960 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 101, 48

Conread position: 1-343
Cow position: chrX:45501969-45502302 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 61

Conread position: 1-343
Cow position: chrX:46771149-46770805 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 232
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 107, 48

Conread position: 1-344
Cow position: chrX:619187-618849 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-344
Cow position: chrX:1176162-1175831 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 227
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 1-344
Cow position: chrX:3154426-3154082 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 52

Conread position: 1-344
Cow position: chrX:7718675-7718991 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 61, 0

Conread position: 1-344
Cow position: chrX:13382146-13382484 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 66

Conread position: 1-344
Cow position: chrX:17725795-17726135 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 48

Conread position: 1-344
Cow position: chrX:21593104-21593446 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 61

Conread position: 1-344
Cow position: chrX:23514198-23513859 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 61

Conread position: 1-344
Cow position: chrX:23785474-23785807 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 95, 61

Conread position: 1-344
Cow position: chrX:25816075-25815743 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 173, 43

Conread position: 1-344
Cow position: chrX:27394193-27393867 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-344
Cow position: chrX:28866172-28865846 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 160, 21

Conread position: 1-344
Cow position: chrX:32820850-32821187 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 8

Conread position: 1-344
Cow position: chrX:34502739-34503081 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 61

Conread position: 1-344
Cow position: chrX:38853017-38853359 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 49

Conread position: 1-344
Cow position: chrX:40481052-40480706 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 104, 72

Conread position: 1-344
Cow position: chrX:42247363-42247023 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 1-344
Cow position: chrX:43730394-43730065 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 1-344
Cow position: chrX:45098932-45099287 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 75

Conread position: 1-344
Cow position: chrX:46532689-46532334 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 60

Conread position: 1-345
Cow position: chrX:12980010-12979672 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 61

Conread position: 1-345
Cow position: chrX:34238541-34238880 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 97, 48

Conread position: 1-345
Cow position: chrX:38642078-38642410 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 61

Conread position: 1-347
Cow position: chrX:13868514-13868865 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 230
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 98

Conread position: 1-347
Cow position: chrX:20151671-20152021 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 102, 38

Conread position: 1-347
Cow position: chrX:41526703-41526367 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 32

Conread position: 1-347
Cow position: chrX:46073000-46072657 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 49

Conread position: 1-348
Cow position: chrX:3579765-3580111 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 48

Conread position: 1-348
Cow position: chrX:3654425-3654770 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 139, 49

Conread position: 1-348
Cow position: chrX:7336647-7337009 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 230
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 51

Conread position: 1-348
Cow position: chrX:7497064-7497405 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 144, 48

Conread position: 1-348
Cow position: chrX:8869588-8869238 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 64

Conread position: 1-348
Cow position: chrX:9252357-9251997 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 28

Conread position: 1-348
Cow position: chrX:9635360-9635031 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 40

Conread position: 1-348
Cow position: chrX:9651225-9650861 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 1-348
Cow position: chrX:10252362-10252036 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 29

Conread position: 1-348
Cow position: chrX:10959580-10959229 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 152, 71

Conread position: 1-348
Cow position: chrX:11633499-11633848 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 48

Conread position: 1-348
Cow position: chrX:12290556-12290884 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 45, 66

Conread position: 1-348
Cow position: chrX:12309568-12309219 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 61

Conread position: 1-348
Cow position: chrX:13177644-13177315 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 47

Conread position: 1-348
Cow position: chrX:14884141-14883791 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 61

Conread position: 1-348
Cow position: chrX:17630982-17630634 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 69, 44

Conread position: 1-348
Cow position: chrX:17794806-17795146 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 62

Conread position: 1-348
Cow position: chrX:19930476-19930810 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 144, 41

Conread position: 1-348
Cow position: chrX:20887824-20887479 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 97, 21

Conread position: 1-348
Cow position: chrX:25713614-25713962 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 169, 61

Conread position: 1-348
Cow position: chrX:27432098-27431755 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 62

Conread position: 1-348
Cow position: chrX:29542398-29542062 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 40

Conread position: 1-348
Cow position: chrX:29602012-29601663 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 61

Conread position: 1-348
Cow position: chrX:31443001-31442665 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 49

Conread position: 1-348
Cow position: chrX:33855412-33855057 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 54

Conread position: 1-348
Cow position: chrX:34441631-34441287 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 96, 48

Conread position: 1-348
Cow position: chrX:34532349-34532684 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 40

Conread position: 1-348
Cow position: chrX:35542712-35543050 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 61

Conread position: 1-348
Cow position: chrX:36975770-36976118 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 95, 49

Conread position: 1-348
Cow position: chrX:37072226-37072552 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-348
Cow position: chrX:37781297-37780945 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 300

Conread position: 1-348
Cow position: chrX:38006947-38006605 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 11

Conread position: 1-348
Cow position: chrX:38094705-38094358 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 16

Conread position: 1-348
Cow position: chrX:38218528-38218879 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 61

Conread position: 1-348
Cow position: chrX:42381279-42380944 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 60

Conread position: 1-348
Cow position: chrX:43780032-43779678 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 61

Conread position: 1-348
Cow position: chrX:45414479-45414144 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 48

Conread position: 1-348
Cow position: chrX:46587638-46587987 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 49

Conread position: 1-348
Cow position: chrX:48236632-48236982 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 62

Conread position: 1-349
Cow position: chrX:11655909-11656245 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 60

Conread position: 1-349
Cow position: chrX:32420039-32420378 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 31

Conread position: 2-165
Cow position: chrX:24201008-24201168 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 47

Conread position: 2-208
Cow position: chrX:9770863-9770653 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 94, 170

Conread position: 2-211
Cow position: chrX:10095848-10096058 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 64

Conread position: 2-235
Cow position: chrX:46381954-46381727 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 60

Conread position: 2-239
Cow position: chrX:2499518-2499288 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 47

Conread position: 2-239
Cow position: chrX:8070880-8070645 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 95, 60

Conread position: 2-262
Cow position: chrX:38071949-38071689 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 66

Conread position: 2-269
Cow position: chrX:42507825-42507564 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 71, 135

Conread position: 2-277
Cow position: chrX:9360705-9360979 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 126, 22

Conread position: 2-277
Cow position: chrX:37843542-37843809 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 99, 47

Conread position: 2-287
Cow position: chrX:23583380-23583663 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 95, 73

Conread position: 2-287
Cow position: chrX:36060973-36061262 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 99, 60

Conread position: 2-288
Cow position: chrX:29289398-29289681 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 100, 70

Conread position: 2-324
Cow position: chrX:3130403-3130711 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 2-324
Cow position: chrX:28013618-28013305 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 39

Conread position: 2-331
Cow position: chrX:45845917-45846247 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 60

Conread position: 2-336
Cow position: chrX:28632658-28632332 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 219
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 144, 23

Conread position: 2-337
Cow position: chrX:40035623-40035288 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 61

Conread position: 2-337
Cow position: chrX:45430195-45429869 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 57

Conread position: 2-338
Cow position: chrX:47211026-47210684 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 60

Conread position: 2-339
Cow position: chrX:24424566-24424247 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 56

Conread position: 2-339
Cow position: chrX:34754370-34754022 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 97, 60

Conread position: 2-341
Cow position: chrX:5872135-5872473 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 60

Conread position: 2-341
Cow position: chrX:45174666-45175008 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 70

Conread position: 2-342
Cow position: chrX:24366012-24365666 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 78, 285

Conread position: 2-342
Cow position: chrX:46032900-46032570 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 100, 60

Conread position: 2-343
Cow position: chrX:36283167-36283497 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 60

Conread position: 2-344
Cow position: chrX:7425287-7425628 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 224
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 60

Conread position: 2-344
Cow position: chrX:42235712-42235366 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 74

Conread position: 2-347
Cow position: chrX:4826006-4825675 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 125, 41

Conread position: 2-347
Cow position: chrX:33000725-33001071 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 60

Conread position: 2-347
Cow position: chrX:34376777-34377104 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 60

Conread position: 2-348
Cow position: chrX:6413868-6414204 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 14

Conread position: 2-348
Cow position: chrX:13191722-13191397 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 227, 57

Conread position: 2-348
Cow position: chrX:24288111-24287767 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 103

Conread position: 2-348
Cow position: chrX:27705411-27705753 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 147, 34

Conread position: 2-348
Cow position: chrX:29545058-29544716 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 95, 29

Conread position: 2-348
Cow position: chrX:47046698-47046347 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 61

Conread position: 3-208
Cow position: chrX:23497842-23497644 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 153, 47

Conread position: 3-263
Cow position: chrX:24105449-24105702 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 97, 47

Conread position: 3-277
Cow position: chrX:23563974-23563699 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 97, 65

Conread position: 3-277
Cow position: chrX:48010417-48010696 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 93, 59

Conread position: 3-295
Cow position: chrX:754781-755075 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 94, 85

Conread position: 3-299
Cow position: chrX:11856251-11856544 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 93, 44

Conread position: 3-324
Cow position: chrX:25419339-25419015 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 209
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 119, 59

Conread position: 3-324
Cow position: chrX:40567422-40567760 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 93, 58

Conread position: 3-336
Cow position: chrX:30543468-30543134 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 59

Conread position: 3-337
Cow position: chrX:4044028-4043715 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 3-343
Cow position: chrX:8730902-8731251 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 67, 252

Conread position: 3-343
Cow position: chrX:35383197-35382877 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 115, 58

Conread position: 3-343
Cow position: chrX:47186498-47186169 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 92, 44

Conread position: 3-345
Cow position: chrX:42171477-42171138 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 59

Conread position: 3-348
Cow position: chrX:12249629-12249982 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 185, 22

Conread position: 3-348
Cow position: chrX:22074623-22074963 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 46

Conread position: 3-348
Cow position: chrX:22482866-22482523 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 60

Conread position: 4-186
Cow position: chrX:1104980-1104796 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 84

Conread position: 4-202
Cow position: chrX:14018975-14019172 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 84

Conread position: 4-232
Cow position: chrX:5123537-5123310 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 125, 86

Conread position: 4-239
Cow position: chrX:22772479-22772713 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 84

Conread position: 4-241
Cow position: chrX:5423242-5423006 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 46

Conread position: 4-253
Cow position: chrX:20791994-20791747 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 107, 45

Conread position: 4-277
Cow position: chrX:15438829-15438558 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 84

Conread position: 4-277
Cow position: chrX:21642656-21642390 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 101, 46

Conread position: 4-290
Cow position: chrX:47166061-47165781 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 20

Conread position: 4-336
Cow position: chrX:4269243-4268914 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 98, 45

Conread position: 4-339
Cow position: chrX:31250213-31250542 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 46

Conread position: 4-344
Cow position: chrX:14599353-14599691 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 58

Conread position: 4-348
Cow position: chrX:27442732-27442372 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 136, 58

Conread position: 4-348
Cow position: chrX:45598780-45598442 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 147, 57

Conread position: 5-239
Cow position: chrX:7053911-7053678 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 68

Conread position: 5-239
Cow position: chrX:27994432-27994194 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 83

Conread position: 5-241
Cow position: chrX:37764372-37764137 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 45

Conread position: 5-283
Cow position: chrX:26440955-26440687 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 86, 57

Conread position: 5-285
Cow position: chrX:34663019-34662746 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 31

Conread position: 5-326
Cow position: chrX:11082789-11082481 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 177, 31

Conread position: 5-344
Cow position: chrX:6690423-6690103 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 42

Conread position: 7-185
Cow position: chrX:11806190-11806012 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 55

Conread position: 7-186
Cow position: chrX:23341141-23340964 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 66

Conread position: 7-196
Cow position: chrX:15575362-15575552 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 55

Conread position: 7-198
Cow position: chrX:19841832-19841647 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 53

Conread position: 7-202
Cow position: chrX:2933546-2933740 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 55

Conread position: 7-202
Cow position: chrX:6655440-6655247 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 55

Conread position: 7-202
Cow position: chrX:14846247-14846053 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 66

Conread position: 7-202
Cow position: chrX:23122212-23122412 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 55

Conread position: 7-207
Cow position: chrX:29509617-29509417 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 89, 40

Conread position: 7-211
Cow position: chrX:29169507-29169304 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 44

Conread position: 7-212
Cow position: chrX:44053085-44053287 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 139, 42

Conread position: 7-226
Cow position: chrX:48165350-48165568 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-231
Cow position: chrX:11498798-11498575 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-231
Cow position: chrX:16279476-16279699 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 81

Conread position: 7-232
Cow position: chrX:24769037-24768813 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 43

Conread position: 7-232
Cow position: chrX:45904005-45904229 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 43

Conread position: 7-233
Cow position: chrX:14221906-14222124 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 90, 55

Conread position: 7-234
Cow position: chrX:48328560-48328334 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 42

Conread position: 7-235
Cow position: chrX:40452386-40452168 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 138, 55

Conread position: 7-238
Cow position: chrX:14598672-14598902 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 84

Conread position: 7-239
Cow position: chrX:4343576-4343807 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 43

Conread position: 7-239
Cow position: chrX:9572350-9572581 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 81

Conread position: 7-239
Cow position: chrX:9976263-9976494 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 81

Conread position: 7-239
Cow position: chrX:10428366-10428597 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 81

Conread position: 7-239
Cow position: chrX:12974297-12974068 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 81

Conread position: 7-239
Cow position: chrX:13971400-13971169 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 81

Conread position: 7-239
Cow position: chrX:14121925-14121694 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 90, 43

Conread position: 7-239
Cow position: chrX:15577814-15577583 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 81

Conread position: 7-239
Cow position: chrX:17055396-17055627 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 57

Conread position: 7-239
Cow position: chrX:20742813-20743044 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 81

Conread position: 7-239
Cow position: chrX:26275966-26276196 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-241
Cow position: chrX:2362326-2362559 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 61

Conread position: 7-241
Cow position: chrX:5599151-5598918 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 43

Conread position: 7-241
Cow position: chrX:6195927-6195694 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 43

Conread position: 7-241
Cow position: chrX:10293335-10293102 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 124, 83

Conread position: 7-241
Cow position: chrX:10306497-10306733 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 59

Conread position: 7-241
Cow position: chrX:15094193-15094426 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 43

Conread position: 7-241
Cow position: chrX:15505118-15505351 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 43

Conread position: 7-241
Cow position: chrX:22557328-22557561 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 81

Conread position: 7-241
Cow position: chrX:27404119-27403886 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 43

Conread position: 7-241
Cow position: chrX:36730211-36730446 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 175

Conread position: 7-241
Cow position: chrX:37497620-37497387 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chrX:1827160-1827394 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chrX:5288860-5288625 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chrX:11664005-11664240 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chrX:12458525-12458762 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 83

Conread position: 7-243
Cow position: chrX:13927946-13927711 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 43

Conread position: 7-243
Cow position: chrX:15172706-15172471 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 81

Conread position: 7-243
Cow position: chrX:16286036-16286271 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chrX:19079978-19079743 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chrX:22856859-22857100 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chrX:23827416-23827651 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chrX:25276672-25276437 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 43

Conread position: 7-243
Cow position: chrX:27594355-27594120 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 43

Conread position: 7-243
Cow position: chrX:34175371-34175136 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 43

Conread position: 7-244
Cow position: chrX:23299781-23300017 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 55

Conread position: 7-245
Cow position: chrX:46146734-46146501 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 40

Conread position: 7-246
Cow position: chrX:23571973-23571732 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 55

Conread position: 7-251
Cow position: chrX:34192503-34192736 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 170, 26

Conread position: 7-256
Cow position: chrX:42460007-42460258 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 55

Conread position: 7-270
Cow position: chrX:48800363-48800623 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 206, 68

Conread position: 7-275
Cow position: chrX:18651218-18650951 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 140, 66

Conread position: 7-275
Cow position: chrX:27106085-27106349 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 55

Conread position: 7-275
Cow position: chrX:37416248-37415982 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 43

Conread position: 7-276
Cow position: chrX:15576371-15576639 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 55

Conread position: 7-277
Cow position: chrX:841985-842249 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 42

Conread position: 7-277
Cow position: chrX:21833712-21833981 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 174
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 59

Conread position: 7-277
Cow position: chrX:23264610-23264341 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 90, 55

Conread position: 7-277
Cow position: chrX:35258905-35258639 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 54

Conread position: 7-277
Cow position: chrX:47588529-47588805 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 24

Conread position: 7-283
Cow position: chrX:22624307-22624574 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 174, 55

Conread position: 7-325
Cow position: chrX:39546147-39545842 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 211
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 117, 42

Conread position: 7-329
Cow position: chrX:7571733-7572050 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 43

Conread position: 7-332
Cow position: chrX:43527330-43527655 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 74, 40

Conread position: 7-337
Cow position: chrX:7277746-7278065 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 311, 37

Conread position: 7-339
Cow position: chrX:22387421-22387096 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 56

Conread position: 7-344
Cow position: chrX:21672378-21672720 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 55

Conread position: 7-345
Cow position: chrX:34411667-34412006 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 55

Conread position: 7-345
Cow position: chrX:35388079-35387737 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 140, 55

Conread position: 7-348
Cow position: chrX:35885903-35885566 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 34

Conread position: 7-349
Cow position: chrX:18485621-18485966 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 55

Conread position: 8-202
Cow position: chrX:16289734-16289541 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 88, 65

Conread position: 8-341
Cow position: chrX:27772133-27771812 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 8-342
Cow position: chrX:46433310-46433647 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 58

Conread position: 8-348
Cow position: chrX:4768578-4768894 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 150, 25

Conread position: 9-201
Cow position: chrX:8991716-8991901 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 32

Conread position: 9-242
Cow position: chrX:22915295-22915527 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 79

Conread position: 9-243
Cow position: chrX:20021392-20021625 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 53

Conread position: 9-281
Cow position: chrX:24259753-24259483 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 116, 36

Conread position: 9-290
Cow position: chrX:47873513-47873231 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 57

Conread position: 9-315
Cow position: chrX:22821876-22822176 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 115, 53

Conread position: 9-337
Cow position: chrX:34792482-34792161 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 53

Conread position: 9-344
Cow position: chrX:7351124-7351456 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 53

Conread position: 9-347
Cow position: chrX:38963935-38964270 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 41

Conread position: 9-348
Cow position: chrX:4398954-4399284 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 53

Conread position: 9-348
Cow position: chrX:27145452-27145765 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 12-275
Cow position: chrX:41271828-41271566 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 5

Conread position: 14-183
Cow position: chrX:14003811-14003641 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 133, 48

Conread position: 14-275
Cow position: chrX:10128838-10129098 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 48

Conread position: 14-277
Cow position: chrX:6493564-6493828 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 61

Conread position: 14-285
Cow position: chrX:14955934-14955669 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 84, 14

Conread position: 14-287
Cow position: chrX:22921147-22921423 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 87, 15

Conread position: 14-288
Cow position: chrX:47967433-47967710 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 43

Conread position: 14-290
Cow position: chrX:47484438-47484159 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 82, 48

Conread position: 14-343
Cow position: chrX:6407382-6407701 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 175, 46

Conread position: 14-344
Cow position: chrX:4279281-4278962 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 222
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 44

Conread position: 14-344
Cow position: chrX:40269318-40269653 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 48

Conread position: 14-348
Cow position: chrX:30133495-30133154 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 15-244
Cow position: chrX:41992207-41991986 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 21

Conread position: 15-344
Cow position: chrX:44396856-44397169 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 35

Conread position: 15-348
Cow position: chrX:14275901-14275582 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 18

Conread position: 16-242
Cow position: chrX:18417756-18417533 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 28

Conread position: 16-269
Cow position: chrX:5638330-5638085 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 141, 46

Conread position: 16-287
Cow position: chrX:15231822-15231558 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 46

Conread position: 16-342
Cow position: chrX:26492838-26493163 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 81, 46

Conread position: 17-244
Cow position: chrX:18515237-18515463 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 45

Conread position: 17-316
Cow position: chrX:41068564-41068856 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 21

Conread position: 17-342
Cow position: chrX:32329994-32330327 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 221
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 44

Conread position: 17-343
Cow position: chrX:878536-878222 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 28

Conread position: 21-334
Cow position: chrX:36355956-36356254 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 28, 0

Conread position: 23-343
Cow position: chrX:31252257-31252565 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 39

Conread position: 25-249
Cow position: chrX:32215038-32215266 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 37

Conread position: 28-239
Cow position: chrX:28105768-28105972 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 34

Conread position: 28-329
Cow position: chrX:20584166-20584472 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 38

Conread position: 28-343
Cow position: chrX:27227971-27228284 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 19

Conread position: 29-316
Cow position: chrX:35288508-35288786 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 104, 20

Conread position: 31-275
Cow position: chrX:47144942-47145175 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 31

Conread position: 31-344
Cow position: chrX:29680409-29680101 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 18

Conread position: 31-347
Cow position: chrX:21986446-21986128 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 32

Conread position: 32-275
Cow position: chrX:12405539-12405291 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 69, 30

Conread position: 32-275
Cow position: chrX:18426090-18425848 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 30

Conread position: 32-275
Cow position: chrX:39071542-39071784 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 65, 43

Conread position: 32-324
Cow position: chrX:45458880-45459177 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 194
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 30

Conread position: 32-343
Cow position: chrX:8917244-8917552 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 65, 41

Conread position: 32-344
Cow position: chrX:39415518-39415208 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 92, 17

Conread position: 32-348
Cow position: chrX:5118654-5118332 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 32-348
Cow position: chrX:25207995-25207695 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 70, 34

Conread position: 32-348
Cow position: chrX:35822190-35822499 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 70, 30

Conread position: 36-176
Cow position: chrX:10366374-10366234 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 106, 26

Conread position: 36-208
Cow position: chrX:36314444-36314272 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 27

Conread position: 36-324
Cow position: chrX:41122922-41123198 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 63, 26

Conread position: 36-342
Cow position: chrX:23561728-23562016 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 30

Conread position: 37-316
Cow position: chrX:38066597-38066324 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 25

Conread position: 38-285
Cow position: chrX:34454518-34454757 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 30

Conread position: 39-235
Cow position: chrX:35681195-35681392 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 11

Conread position: 39-242
Cow position: chrX:34990890-34991093 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 138, 22

Conread position: 39-268
Cow position: chrX:13785508-13785280 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 23

Conread position: 39-311
Cow position: chrX:39126186-39126452 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 39-341
Cow position: chrX:4996456-4996741 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 216, 23

Conread position: 39-347
Cow position: chrX:161271-161576 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 295, 30

Conread position: 40-269
Cow position: chrX:29723597-29723824 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 57, 22

Conread position: 40-342
Cow position: chrX:16762622-16762930 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 65, 22

Conread position: 40-343
Cow position: chrX:10394242-10393952 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 35

Conread position: 40-347
Cow position: chrX:5919352-5919657 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 22

Conread position: 40-349
Cow position: chrX:34313889-34314188 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 22

Conread position: 41-290
Cow position: chrX:48646743-48646501 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 25

Conread position: 41-337
Cow position: chrX:11614556-11614846 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 21

Conread position: 42-287
Cow position: chrX:22454234-22453996 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 59, 24

Conread position: 43-290
Cow position: chrX:21566261-21566512 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 59, 19

Conread position: 44-289
Cow position: chrX:27685107-27685353 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 52, 18

Conread position: 45-342
Cow position: chrX:30840417-30840703 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 145, 17

Conread position: 45-344
Cow position: chrX:616401-616099 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 17

Conread position: 45-344
Cow position: chrX:1503196-1503488 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 7, 132

Conread position: 45-344
Cow position: chrX:18204602-18204304 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 17

Conread position: 46-235
Cow position: chrX:34270261-34270452 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 47-339
Cow position: chrX:41027020-41027313 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 15

Conread position: 48-344
Cow position: chrX:9365813-9365515 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 117

Conread position: 50-324
Cow position: chrX:15814953-15815222 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 96, 12

Conread position: 50-324
Cow position: chrX:34565149-34565423 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 103, 12

Conread position: 50-324
Cow position: chrX:37986099-37986364 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 126, 12

Conread position: 50-333
Cow position: chrX:48014307-48014583 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 97, 18

Conread position: 50-344
Cow position: chrX:11085191-11084904 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 12

Conread position: 50-347
Cow position: chrX:12437385-12437110 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 50-348
Cow position: chrX:31729309-31729603 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 52, 12

Conread position: 51-287
Cow position: chrX:36393482-36393240 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 111

Conread position: 51-310
Cow position: chrX:32431492-32431749 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 173
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 28

Conread position: 51-344
Cow position: chrX:37955698-37956004 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 115, 299

Conread position: 51-348
Cow position: chrX:41870938-41871225 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 88

Conread position: 53-308
Cow position: chrX:16055078-16055329 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 106

Conread position: 53-313
Cow position: chrX:19273854-19273579 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 53-328
Cow position: chrX:42855321-42855601 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 144

Conread position: 53-336
Cow position: chrX:45976789-45977077 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 53-348
Cow position: chrX:31294688-31294403 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 9

Conread position: 54-280
Cow position: chrX:6488446-6488671 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 12

Conread position: 55-329
Cow position: chrX:7695617-7695892 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 196

Conread position: 57-312
Cow position: chrX:27516399-27516646 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 159

Conread position: 58-346
Cow position: chrX:6260285-6259985 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 10

Conread position: 60-251
Cow position: chrX:20790795-20790979 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 119

Conread position: 62-245
Cow position: chrX:9155130-9155321 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 62-345
Cow position: chrX:45968038-45968307 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 26

Conread position: 63-266
Cow position: chrX:19003177-19003374 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 77, 116

Conread position: 63-275
Cow position: chrX:27946182-27945964 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 63-323
Cow position: chrX:48044633-48044378 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 84, 8

Conread position: 63-338
Cow position: chrX:38728614-38728887 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 128

Conread position: 63-343
Cow position: chrX:7710666-7710380 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 122

Conread position: 63-344
Cow position: chrX:5017537-5017262 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 178

Conread position: 63-348
Cow position: chrX:34505170-34504887 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 73

Conread position: 64-290
Cow position: chrX:40320283-40320511 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 96

Conread position: 64-334
Cow position: chrX:7161938-7162203 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 105, 88

Conread position: 67-339
Cow position: chrX:48243580-48243322 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 77, 48

Conread position: 67-340
Cow position: chrX:42873273-42873540 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 14

Conread position: 67-342
Cow position: chrX:4403195-4403474 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 94

Conread position: 67-342
Cow position: chrX:45875272-45875548 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 35, 100

Conread position: 67-344
Cow position: chrX:40685450-40685169 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 67-348
Cow position: chrX:43115032-43115315 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 95

Conread position: 68-230
Cow position: chrX:17497967-17498130 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 68-239
Cow position: chrX:28845714-28845887 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 10

Conread position: 68-323
Cow position: chrX:29120928-29121185 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 89, 0

Conread position: 68-336
Cow position: chrX:5679684-5679421 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 93

Conread position: 68-347
Cow position: chrX:20168440-20168723 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 10

Conread position: 68-348
Cow position: chrX:34315407-34315688 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 117, 35

Conread position: 69-277
Cow position: chrX:4296945-4296733 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 124

Conread position: 69-294
Cow position: chrX:44744934-44744709 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 105

Conread position: 69-344
Cow position: chrX:26881685-26881405 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 69-344
Cow position: chrX:27119582-27119855 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 108

Conread position: 70-287
Cow position: chrX:40826871-40826649 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 137

Conread position: 70-344
Cow position: chrX:24331662-24331935 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 110

Conread position: 70-348
Cow position: chrX:46291023-46291307 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 75, 11

Conread position: 71-290
Cow position: chrX:48262491-48262711 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 102

Conread position: 71-348
Cow position: chrX:6265712-6265438 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 17

Conread position: 72-348
Cow position: chrX:42927933-42927661 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 106

Conread position: 73-316
Cow position: chrX:29229896-29230130 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 6, 97

Conread position: 73-334
Cow position: chrX:33539052-33539317 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 122

Conread position: 73-339
Cow position: chrX:45113504-45113774 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 107

Conread position: 73-343
Cow position: chrX:38654543-38654281 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 47

Conread position: 73-344
Cow position: chrX:30338055-30337800 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 26

Conread position: 73-347
Cow position: chrX:14973854-14973584 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 108

Conread position: 74-337
Cow position: chrX:28878281-28878022 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 14

Conread position: 75-269
Cow position: chrX:4992127-4991929 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 75-275
Cow position: chrX:13146870-13147071 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 15

Conread position: 75-277
Cow position: chrX:17949601-17949401 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 100

Conread position: 75-328
Cow position: chrX:43567811-43568062 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 72, 104

Conread position: 75-343
Cow position: chrX:29194123-29194390 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 73, 60

Conread position: 76-341
Cow position: chrX:45670117-45670376 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 119, 25

Conread position: 78-269
Cow position: chrX:47657276-47657470 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 53

Conread position: 81-344
Cow position: chrX:169645-169387 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 15, 53

Conread position: 81-348
Cow position: chrX:13923766-13924027 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 90

Conread position: 84-344
Cow position: chrX:16348672-16348412 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 162

Conread position: 87-239
Cow position: chrX:48201197-48201348 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 92

Conread position: 88-274
Cow position: chrX:1572235-1572050 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 70, 93

Conread position: 89-316
Cow position: chrX:31515072-31515305 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 89-343
Cow position: chrX:10516159-10516411 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 80, 42

Conread position: 90-316
Cow position: chrX:11851765-11851548 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 89

Conread position: 90-341
Cow position: chrX:45884071-45883815 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 126

Conread position: 90-342
Cow position: chrX:34837150-34836909 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 90-343
Cow position: chrX:21327812-21328071 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 11

Conread position: 90-344
Cow position: chrX:12095870-12095613 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 9, 93

Conread position: 90-344
Cow position: chrX:29549644-29549393 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 162

Conread position: 91-337
Cow position: chrX:38560462-38560709 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 75

Conread position: 91-348
Cow position: chrX:38208637-38208378 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 56, 21

Conread position: 94-318
Cow position: chrX:45648781-45649015 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 54, 44

Conread position: 94-343
Cow position: chrX:33654933-33654686 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 81

Conread position: 94-343
Cow position: chrX:37129177-37129427 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 59, 41

Conread position: 94-348
Cow position: chrX:1466069-1466326 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 95-342
Cow position: chrX:29050156-29050405 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 158

Conread position: 95-347
Cow position: chrX:918818-918553 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 181

Conread position: 95-348
Cow position: chrX:27261097-27261357 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 36

Conread position: 97-349
Cow position: chrX:33205053-33204801 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 228, 76

Conread position: 99-342
Cow position: chrX:11318054-11317811 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 85

Conread position: 100-238
Cow position: chrX:5677978-5677838 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 100-320
Cow position: chrX:20882023-20881809 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 207, 77

Conread position: 100-339
Cow position: chrX:36514980-36514739 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 229

Conread position: 100-341
Cow position: chrX:23562549-23562788 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 100-344
Cow position: chrX:6559531-6559298 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 72

Conread position: 100-348
Cow position: chrX:40680525-40680781 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 101-343
Cow position: chrX:18273143-18272901 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 149

Conread position: 104-343
Cow position: chrX:36866089-36866330 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 190

Conread position: 106-337
Cow position: chrX:5135605-5135368 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 41, 216

Conread position: 106-343
Cow position: chrX:39220000-39220237 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 69

Conread position: 106-348
Cow position: chrX:47345254-47345496 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 45, 69

Conread position: 106-349
Cow position: chrX:41192628-41192866 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 36

Conread position: 107-265
Cow position: chrX:44569004-44569164 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 15, 83

Conread position: 107-342
Cow position: chrX:22115396-22115161 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 75

Conread position: 107-344
Cow position: chrX:41271077-41270827 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 107-346
Cow position: chrX:23113199-23113447 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 28

Conread position: 108-334
Cow position: chrX:4153113-4152882 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 108-348
Cow position: chrX:4515606-4515854 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 176

Conread position: 111-335
Cow position: chrX:19469575-19469358 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 113-342
Cow position: chrX:1088209-1087986 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 65, 37

Conread position: 118-290
Cow position: chrX:41111653-41111821 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 66

Conread position: 118-348
Cow position: chrX:38321455-38321217 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 120-316
Cow position: chrX:12082391-12082193 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 23, 128

Conread position: 120-341
Cow position: chrX:15820531-15820750 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 62

Conread position: 123-269
Cow position: chrX:35657380-35657236 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 103

Conread position: 123-341
Cow position: chrX:25036924-25037143 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 66

Conread position: 123-341
Cow position: chrX:47650263-47650060 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 123-342
Cow position: chrX:48558686-48558903 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 123-344
Cow position: chrX:4109129-4109343 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 124-337
Cow position: chrX:19097284-19097068 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 55

Conread position: 126-324
Cow position: chrX:46429881-46429680 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 126-329
Cow position: chrX:27511367-27511572 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 27, 55

Conread position: 128-336
Cow position: chrX:22915094-22914891 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 23, 50

Conread position: 129-342
Cow position: chrX:31627038-31626820 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 117

Conread position: 130-343
Cow position: chrX:32978133-32977928 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 51

Conread position: 134-329
Cow position: chrX:19943289-19943092 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 134

Conread position: 135-337
Cow position: chrX:18964875-18964676 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 7, 104

Conread position: 135-337
Cow position: chrX:35985767-35985969 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 104

Conread position: 136-343
Cow position: chrX:20957198-20957396 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 12, 42

Conread position: 137-347
Cow position: chrX:22393035-22392823 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 175

Conread position: 138-324
Cow position: chrX:44759992-44759800 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 162

Conread position: 139-337
Cow position: chrX:27306407-27306608 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 142-337
Cow position: chrX:40532086-40531891 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 144-325
Cow position: chrX:2523718-2523542 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 144-337
Cow position: chrX:4289399-4289595 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 188

Conread position: 144-347
Cow position: chrX:11326140-11325935 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 149

Conread position: 144-348
Cow position: chrX:6599824-6599617 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 41, 0

Conread position: 144-348
Cow position: chrX:19394512-19394721 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 176, 0

Conread position: 146-281
Cow position: chrX:44095220-44095356 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 146-342
Cow position: chrX:16984589-16984797 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 27, 158

Conread position: 146-342
Cow position: chrX:29553247-29553441 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 146-346
Cow position: chrX:24749049-24749253 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 175, 100

Conread position: 147-347
Cow position: chrX:47061357-47061560 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 151-343
Cow position: chrX:41941593-41941781 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 152-344
Cow position: chrX:17956663-17956849 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 155-342
Cow position: chrX:4645941-4645758 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 157-344
Cow position: chrX:20743575-20743764 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 158-339
Cow position: chrX:4616035-4615859 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 24

Conread position: 158-348
Cow position: chrX:28940219-28940410 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 116, 18

Conread position: 163-337
Cow position: chrX:25411886-25412057 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 166-348
Cow position: chrX:24633665-24633860 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 9, 22

Conread position: 169-337
Cow position: chrX:6223144-6222975 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 155, 0

Conread position: 169-337
Cow position: chrX:16836303-16836137 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 9, 80

Conread position: 169-341
Cow position: chrX:45383061-45382892 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 171-348
Cow position: chrX:12972668-12972844 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 16

Conread position: 173-347
Cow position: chrX:32208834-32208661 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 0

Conread position: 173-348
Cow position: chrX:26205460-26205288 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 153, 0

Conread position: 173-348
Cow position: chrX:39290347-39290520 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 141, 0

Conread position: 174-341
Cow position: chrX:42893914-42894083 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 13

Conread position: 176-327
Cow position: chrX:17966332-17966483 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 176-344
Cow position: chrX:18046392-18046555 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 176-348
Cow position: chrX:3806672-3806844 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 151

Conread position: 176-348
Cow position: chrX:42836172-42836347 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 150, 0

Conread position: 177-337
Cow position: chrX:42331270-42331435 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 72

Conread position: 179-339
Cow position: chrX:48278256-48278415 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 32

Conread position: 179-344
Cow position: chrX:29733601-29733434 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 150

Conread position: 180-325
Cow position: chrX:27075056-27074911 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 180-341
Cow position: chrX:23188785-23188628 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 180-342
Cow position: chrX:25788910-25788748 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 181-348
Cow position: chrX:2935953-2936119 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 137
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 145, 0

Conread position: 182-314
Cow position: chrX:25328618-25328487 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 182-324
Cow position: chrX:4466964-4467106 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 182-324
Cow position: chrX:11763004-11762862 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 182-337
Cow position: chrX:42160624-42160775 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 182-343
Cow position: chrX:35275983-35276143 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 182-343
Cow position: chrX:38587846-38587685 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 182-344
Cow position: chrX:12191758-12191919 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 183-329
Cow position: chrX:46070174-46070024 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 183-338
Cow position: chrX:42479831-42479985 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 143, 0

Conread position: 183-344
Cow position: chrX:23498680-23498521 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 66

Conread position: 183-346
Cow position: chrX:32910102-32910261 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 153, 96

Conread position: 183-347
Cow position: chrX:31829463-31829299 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 184-339
Cow position: chrX:42450015-42449860 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 184-344
Cow position: chrX:47079626-47079786 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 184-345
Cow position: chrX:34420733-34420894 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 185-332
Cow position: chrX:29501881-29501737 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 185-345
Cow position: chrX:27668958-27668798 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 137
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 187-344
Cow position: chrX:24170727-24170569 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 141, 92

Conread position: 188-342
Cow position: chrX:39180230-39180077 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 189-341
Cow position: chrX:32943072-32942920 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 190-344
Cow position: chrX:1122538-1122388 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 195-313
Cow position: chrX:37665701-37665819 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 196-313
Cow position: chrX:42481720-42481603 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 197-337
Cow position: chrX:23266427-23266568 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 132, 0

Conread position: 197-348
Cow position: chrX:29467766-29467616 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 139, 0

Conread position: 198-348
Cow position: chrX:41862377-41862526 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 199-337
Cow position: chrX:38301823-38301961 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 199-344
Cow position: chrX:753166-753315 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 201-334
Cow position: chrX:41164630-41164760 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 201-348
Cow position: chrX:20583682-20583829 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 201-348
Cow position: chrX:31479987-31480132 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 107, 57

Conread position: 203-341
Cow position: chrX:34508562-34508700 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 203-343
Cow position: chrX:28098344-28098485 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 204-337
Cow position: chrX:7513507-7513636 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 204-348
Cow position: chrX:5026275-5026416 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 205-332
Cow position: chrX:20340623-20340496 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 206-348
Cow position: chrX:44991392-44991251 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 207-322
Cow position: chrX:4617376-4617261 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 210-342
Cow position: chrX:32866900-32867032 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 210-344
Cow position: chrX:37062560-37062425 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 211-329
Cow position: chrX:21573599-21573715 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 211-348
Cow position: chrX:23359085-23358951 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 214-348
Cow position: chrX:23136769-23136900 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 215-315
Cow position: chrX:4942228-4942128 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 215-337
Cow position: chrX:41453332-41453454 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 215-344
Cow position: chrX:40046545-40046419 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 215-344
Cow position: chrX:41939853-41939983 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 215-348
Cow position: chrX:8326934-8327071 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 216-344
Cow position: chrX:29688144-29688017 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 216-348
Cow position: chrX:41858850-41858718 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 9

Conread position: 218-332
Cow position: chrX:11578616-11578498 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 220-348
Cow position: chrX:34991399-34991527 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 221-348
Cow position: chrX:14135716-14135841 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 221-348
Cow position: chrX:17525830-17525708 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 222-344
Cow position: chrX:6480559-6480437 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 9

Conread position: 228-336
Cow position: chrX:31983542-31983434 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 228-342
Cow position: chrX:23471823-23471708 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 92, 0

Show alignments to all cow chromosomes.