Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 1-202 |
| Cow position: | chr10:10223574-10223364 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 1-202 |
| Cow position: | chr10:26023615-26023403 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 12-173 |
| Cow position: | chr10:29495697-29495856 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 23-203 |
| Cow position: | chr10:28854633-28854818 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 218-545 |
| Cow position: | chr10:21399335-21399660 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 79, 156 |
| Conread position: | 229-401 |
| Cow position: | chr10:28946815-28946638 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 106, 73 |
| Conread position: | 229-541 |
| Cow position: | chr10:39039962-39040292 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 20, 280 |
| Conread position: | 229-545 |
| Cow position: | chr10:50135909-50135583 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 276 |
| Conread position: | 232-541 |
| Cow position: | chr10:42752469-42752146 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 272 |
| Conread position: | 233-537 |
| Cow position: | chr10:38544598-38544899 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 233-541 |
| Cow position: | chr10:39778788-39779105 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 233-545 |
| Cow position: | chr10:19841012-19840692 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 266 |
| Conread position: | 233-545 |
| Cow position: | chr10:40150923-40151234 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 142 |
| Conread position: | 244-545 |
| Cow position: | chr10:1665214-1665523 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 255 |
| Conread position: | 245-534 |
| Cow position: | chr10:40641278-40640982 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 245-541 |
| Cow position: | chr10:19512897-19512606 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 130 |
| Conread position: | 246-395 |
| Cow position: | chr10:51773890-51774045 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 246-428 |
| Cow position: | chr10:20382703-20382882 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 246-460 |
| Cow position: | chr10:29631483-29631705 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 246-479 |
| Cow position: | chr10:10583432-10583194 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 218 |
| Conread position: | 246-512 |
| Cow position: | chr10:62407462-62407737 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 213 |
| Conread position: | 246-525 |
| Cow position: | chr10:64146245-64145959 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 56, 211 |
| Conread position: | 246-536 |
| Cow position: | chr10:51782099-51782391 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 56 |
| Conread position: | 246-537 |
| Cow position: | chr10:187407-187117 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 246-537 |
| Cow position: | chr10:57502125-57501839 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 246-539 |
| Cow position: | chr10:24311045-24311348 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 51, 212 |
| Conread position: | 246-539 |
| Cow position: | chr10:38849605-38849319 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 51, 217 |
| Conread position: | 246-540 |
| Cow position: | chr10:20375516-20375815 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 108 |
| Conread position: | 246-540 |
| Cow position: | chr10:58597687-58597393 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 246-541 |
| Cow position: | chr10:1378815-1378522 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 246-541 |
| Cow position: | chr10:2119698-2119997 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 219 |
| Conread position: | 246-541 |
| Cow position: | chr10:7280787-7281075 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 180 |
| Conread position: | 246-541 |
| Cow position: | chr10:14334530-14334833 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 219 |
| Conread position: | 246-541 |
| Cow position: | chr10:14862985-14862701 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 246-541 |
| Cow position: | chr10:16926848-16926544 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 254 |
| Conread position: | 246-541 |
| Cow position: | chr10:29845330-29845632 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 81 |
| Conread position: | 246-541 |
| Cow position: | chr10:30684177-30684497 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 165 |
| Conread position: | 246-541 |
| Cow position: | chr10:31472075-31471776 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 125, 14 |
| Conread position: | 246-541 |
| Cow position: | chr10:32702043-32701741 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 212 |
| Conread position: | 246-541 |
| Cow position: | chr10:38344044-38344344 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 97 |
| Conread position: | 246-541 |
| Cow position: | chr10:38537181-38537485 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 39 |
| Conread position: | 246-543 |
| Cow position: | chr10:57556020-57556326 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 51, 254 |
| Conread position: | 246-544 |
| Cow position: | chr10:41568416-41568112 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 251 |
| Conread position: | 246-545 |
| Cow position: | chr10:6545-6258 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 246-545 |
| Cow position: | chr10:279292-279596 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 167 |
| Conread position: | 246-545 |
| Cow position: | chr10:14805161-14804855 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 252 |
| Conread position: | 246-545 |
| Cow position: | chr10:22575820-22576113 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 97, 146 |
| Conread position: | 246-545 |
| Cow position: | chr10:27663951-27664253 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 246-545 |
| Cow position: | chr10:28256101-28256405 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 246-545 |
| Cow position: | chr10:28642855-28642545 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 215 |
| Conread position: | 246-545 |
| Cow position: | chr10:29722724-29723042 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 138 |
| Conread position: | 246-545 |
| Cow position: | chr10:39181111-39180801 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 246-545 |
| Cow position: | chr10:44708296-44708604 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 53, 170 |
| Conread position: | 246-545 |
| Cow position: | chr10:53321077-53321380 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 204 |
| Conread position: | 248-469 |
| Cow position: | chr10:55285275-55285041 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 248-525 |
| Cow position: | chr10:17433670-17433383 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 49, 247 |
| Conread position: | 248-541 |
| Cow position: | chr10:22102550-22102253 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 54, 127 |
| Conread position: | 249-545 |
| Cow position: | chr10:41878235-41877929 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 48, 252 |
| Conread position: | 250-544 |
| Cow position: | chr10:60361209-60360905 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 47, 255 |
| Conread position: | 250-545 |
| Cow position: | chr10:29109831-29110134 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 251-545 |
| Cow position: | chr10:19494977-19495269 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 33, 124 |
| Conread position: | 255-540 |
| Cow position: | chr10:21481240-21480949 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 131 |
| Conread position: | 255-545 |
| Cow position: | chr10:8326026-8326308 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 260-454 |
| Cow position: | chr10:126588-126388 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 260-541 |
| Cow position: | chr10:57988693-57988981 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 260-545 |
| Cow position: | chr10:51843892-51844182 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 46, 174 |
| Conread position: | 302-545 |
| Cow position: | chr10:28928704-28928950 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 110, 151 |
| Conread position: | 313-545 |
| Cow position: | chr10:34286508-34286269 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 185 |
| Conread position: | 378-541 |
| Cow position: | chr10:21899023-21899186 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 114 |
| Conread position: | 390-541 |
| Cow position: | chr10:8291150-8290994 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 13 |
Show alignments to all cow chromosomes.