Cow genome map


           Conread name:
           rgul0117_e19.y1
        

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               12-173
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               23-203
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 77
               

               Conread position:
               218-545
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               79, 156
               

               Conread position:
               229-401
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               106, 73
               

               Conread position:
               229-541
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 280
               

               Conread position:
               229-545
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 276
               

               Conread position:
               232-541
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 272
               

               Conread position:
               233-537
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 13
               

               Conread position:
               233-541
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 13
               

               Conread position:
               233-545
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 266
               

               Conread position:
               233-545
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 142
               

               Conread position:
               244-545
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 255
               

               Conread position:
               245-534
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               53, 73
               

               Conread position:
               245-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 130
               

               Conread position:
               246-395
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               246-428
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               246-460
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               246-479
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               57, 218
               

               Conread position:
               246-512
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 213
               

               Conread position:
               246-525
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               56, 211
               

               Conread position:
               246-536
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 56
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               246-539
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               246-539
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               51, 217
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 108
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 43
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 47
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 219
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 180
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 219
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               93, 47
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 254
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 81
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 165
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               125, 14
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 212
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 97
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 39
               

               Conread position:
               246-543
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               51, 254
               

               Conread position:
               246-544
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 251
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               60, 90
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 167
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 252
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               97, 146
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               51, 114
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 215
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 138
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               53, 170
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 204
               

               Conread position:
               248-469
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               248-525
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               49, 247
               

               Conread position:
               248-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               54, 127
               

               Conread position:
               249-545
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               48, 252
               

               Conread position:
               250-544
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               47, 255
               

               Conread position:
               250-545
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               47, 112
               

               Conread position:
               251-545
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               33, 124
               

               Conread position:
               255-540
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 131
               

               Conread position:
               255-545
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               260-454
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               260-541
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 83
               

               Conread position:
               260-545
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               46, 174
               

               Conread position:
               302-545
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               110, 151
               

               Conread position:
               313-545
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 185
               

               Conread position:
               378-541
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 114
               

               Conread position:
               390-541
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               78, 13
               
Show alignments to all cow chromosomes.