Cow genome map


           Conread name:
           rgul0117_e19.y1
        

               Conread position:
               1-125
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               8-133
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 78
               

               Conread position:
               12-162
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               12-201
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               15, 88
               

               Conread position:
               221-511
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               33, 281
               

               Conread position:
               232-537
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 235
               

               Conread position:
               233-411
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               16, 120
               

               Conread position:
               233-537
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               16, 85
               

               Conread position:
               244-401
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 154
               

               Conread position:
               244-545
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               58, 219
               

               Conread position:
               245-541
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 108
               

               Conread position:
               246-359
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               246-375
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 113
               

               Conread position:
               246-473
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               246-486
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               56, 47
               

               Conread position:
               246-488
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               246-522
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               96, 75
               

               Conread position:
               246-523
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               246-533
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               246-534
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 263
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 254
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 259
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 220
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 97
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 181
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 253
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 256
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 254
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 255
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 94
               

               Conread position:
               246-543
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 96
               

               Conread position:
               246-543
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               52, 128
               

               Conread position:
               246-544
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               246-544
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 201
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               93, 38
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 252
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               234
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               66, 27
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 65
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               51, 258
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               96, 200
               

               Conread position:
               247-423
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               247-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 254
               

               Conread position:
               247-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 96
               

               Conread position:
               248-466
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               49, 121
               

               Conread position:
               248-545
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               248-545
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 95
               

               Conread position:
               249-393
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               250-541
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 207
               

               Conread position:
               250-544
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 104
               

               Conread position:
               252-545
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               253-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 250
               

               Conread position:
               258-545
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               82, 45
               

               Conread position:
               260-541
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 239
               

               Conread position:
               260-541
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 238
               

               Conread position:
               260-541
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 248
               

               Conread position:
               261-469
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 92
               

               Conread position:
               261-469
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 92
               

               Conread position:
               278-533
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               289-540
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 169
               

               Conread position:
               369-545
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 82
               

               Conread position:
               378-541
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               35, 114
               

               Conread position:
               380-542
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 115
               

               Conread position:
               386-535
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               386-545
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               31, 108
               
Show alignments to all cow chromosomes.