Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 1-129 |
| Cow position: | chr12:26292632-26292764 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-161 |
| Cow position: | chr12:36069225-36069388 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 1-176 |
| Cow position: | chr12:16081779-16081958 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 8-176 |
| Cow position: | chr12:31871024-31871195 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 152 |
| Conread position: | 245-540 |
| Cow position: | chr12:6405398-6405701 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 229 |
| Conread position: | 246-430 |
| Cow position: | chr12:35313155-35313340 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 246-441 |
| Cow position: | chr12:1776724-1776925 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 246-476 |
| Cow position: | chr12:48471637-48471872 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 246-537 |
| Cow position: | chr12:8676856-8677156 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 246-537 |
| Cow position: | chr12:32064334-32064047 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 57, 140 |
| Conread position: | 246-541 |
| Cow position: | chr12:11099465-11099176 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 219 |
| Conread position: | 246-541 |
| Cow position: | chr12:25262223-25262526 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 246-541 |
| Cow position: | chr12:27854721-27855024 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 212 |
| Conread position: | 246-541 |
| Cow position: | chr12:27931661-27931968 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 257 |
| Conread position: | 246-545 |
| Cow position: | chr12:21387000-21387306 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 51, 211 |
| Conread position: | 246-545 |
| Cow position: | chr12:21942984-21942668 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 56, 187 |
| Conread position: | 246-545 |
| Cow position: | chr12:23140950-23141259 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 256 |
| Conread position: | 246-545 |
| Cow position: | chr12:35345792-35345494 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 146 |
| Conread position: | 247-541 |
| Cow position: | chr12:600124-600418 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 247-541 |
| Cow position: | chr12:42858295-42858595 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 249 |
| Conread position: | 248-457 |
| Cow position: | chr12:33119396-33119178 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 12 |
| Conread position: | 249-545 |
| Cow position: | chr12:43030142-43030448 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 48, 94 |
| Conread position: | 250-369 |
| Cow position: | chr12:11581053-11580931 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 250-397 |
| Cow position: | chr12:20843856-20843709 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 250-536 |
| Cow position: | chr12:21128366-21128087 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 42 |
| Conread position: | 250-536 |
| Cow position: | chr12:23161690-23161982 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 253-466 |
| Cow position: | chr12:5144923-5144705 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 253-540 |
| Cow position: | chr12:48211306-48211578 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 253-541 |
| Cow position: | chr12:25099837-25100133 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 212 |
| Conread position: | 254-541 |
| Cow position: | chr12:28005139-28004867 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 262-541 |
| Cow position: | chr12:1403719-1403434 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 234 |
| Conread position: | 267-541 |
| Cow position: | chr12:36368052-36367766 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 236 |
| Conread position: | 296-537 |
| Cow position: | chr12:12293149-12292916 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 301-533 |
| Cow position: | chr12:32677761-32677987 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 118, 54 |
| Conread position: | 325-541 |
| Cow position: | chr12:14661464-14661688 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 140 |
| Conread position: | 335-541 |
| Cow position: | chr12:22204590-22204802 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 162 |
| Conread position: | 348-545 |
| Cow position: | chr12:21199097-21198898 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 378-545 |
| Cow position: | chr12:41380786-41380617 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 74 |
Show alignments to all cow chromosomes.