Cow genome map


           Conread name:
           rgul0117_e19.y1
        

               Conread position:
               2-163
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 119
               

               Conread position:
               8-142
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               8-202
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               12-183
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               12-202
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 77
               

               Conread position:
               221-467
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               225-536
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               227-540
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               109, 13
               

               Conread position:
               233-541
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 270
               

               Conread position:
               233-544
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               244-404
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               244-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               222, 61
               

               Conread position:
               244-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 147
               

               Conread position:
               244-541
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 148
               

               Conread position:
               244-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 243
               

               Conread position:
               244-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               244-545
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 43
               

               Conread position:
               244-545
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 22
               

               Conread position:
               244-545
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               37, 41
               

               Conread position:
               245-540
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               52, 97
               

               Conread position:
               245-541
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 259
               

               Conread position:
               245-544
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 208
               

               Conread position:
               246-349
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               246-397
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               246-488
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               50, 169
               

               Conread position:
               246-515
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               51, 111
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 258
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               15, 132
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 251
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 266
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               56, 36
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 188
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 253
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 252
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 106
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 106
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               51, 211
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               53, 127
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 234
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               51, 107
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 190
               

               Conread position:
               247-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 206
               

               Conread position:
               247-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               247-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 115
               

               Conread position:
               247-544
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 146
               

               Conread position:
               247-545
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 96
               

               Conread position:
               249-540
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               48, 90
               

               Conread position:
               250-544
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               253-541
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 103
               

               Conread position:
               253-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               50, 255
               

               Conread position:
               260-545
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               261-541
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 197
               

               Conread position:
               308-545
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               325-541
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               17, 104
               

               Conread position:
               330-541
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 134
               

               Conread position:
               332-545
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               6, 169
               

               Conread position:
               384-545
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               389-541
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 70
               
Show alignments to all cow chromosomes.