Cow genome map


           Conread name:
           rgul0117_e19.y1
        

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 102
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               11-166
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               12-161
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 125
               

               Conread position:
               208-537
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               135, 8
               

               Conread position:
               218-537
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               31, 68
               

               Conread position:
               218-541
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 250
               

               Conread position:
               223-545
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 19
               

               Conread position:
               225-525
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               226-545
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               229-540
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               229-541
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               229-545
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               232-487
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               233-374
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 124
               

               Conread position:
               233-484
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               64, 77
               

               Conread position:
               233-533
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               16, 111
               

               Conread position:
               233-537
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 271
               

               Conread position:
               233-537
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 125
               

               Conread position:
               233-540
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               16, 147
               

               Conread position:
               234-510
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               15, 159
               

               Conread position:
               235-537
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 83
               

               Conread position:
               244-523
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               53, 219
               

               Conread position:
               244-530
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 49
               

               Conread position:
               244-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               58, 190
               

               Conread position:
               244-545
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 255
               

               Conread position:
               246-375
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               246-452
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               246-463
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               246-513
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 254
               

               Conread position:
               246-535
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 254
               

               Conread position:
               246-536
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               50, 254
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               51, 172
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               51, 107
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               56, 68
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 71
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               226
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               51, 134
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               56, 276
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               58, 122
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               52, 252
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 254
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 47
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 147
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               93, 14
               

               Conread position:
               246-543
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               56, 95
               

               Conread position:
               246-543
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 74
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               56, 131
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               51, 253
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               51, 205
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 199
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               22, 217
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 213
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               247-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 144
               

               Conread position:
               247-543
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               50, 88
               

               Conread position:
               248-471
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               49, 95
               

               Conread position:
               249-537
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               54, 74
               

               Conread position:
               250-533
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 151
               

               Conread position:
               250-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               253-540
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               253-541
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               45, 244
               

               Conread position:
               253-544
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 90
               

               Conread position:
               260-541
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 171
               

               Conread position:
               260-541
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 115
               

               Conread position:
               262-516
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               36, 162
               

               Conread position:
               262-522
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 83
               

               Conread position:
               262-541
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 130
               

               Conread position:
               267-541
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 233
               

               Conread position:
               291-540
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               297-545
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 194
               

               Conread position:
               306-540
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               35, 202
               

               Conread position:
               325-541
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               17, 174
               

               Conread position:
               329-545
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               355-540
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 147
               
Show alignments to all cow chromosomes.