Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 1-173 |
| Cow position: | chr18:24798983-24799156 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 1-176 |
| Cow position: | chr18:25670271-25670453 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-176 |
| Cow position: | chr18:51779876-51780053 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 1-201 |
| Cow position: | chr18:51803963-51804170 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 11-151 |
| Cow position: | chr18:11268576-11268719 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 211-467 |
| Cow position: | chr18:33270312-33270059 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 87, 10 |
| Conread position: | 211-530 |
| Cow position: | chr18:54271849-54271542 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 91, 33 |
| Conread position: | 225-441 |
| Cow position: | chr18:51614294-51614511 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 244-541 |
| Cow position: | chr18:37507297-37506997 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 244-541 |
| Cow position: | chr18:54022790-54023098 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 43 |
| Conread position: | 244-541 |
| Cow position: | chr18:54170170-54170500 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 53, 279 |
| Conread position: | 246-535 |
| Cow position: | chr18:16089458-16089181 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 127, 59 |
| Conread position: | 246-537 |
| Cow position: | chr18:2297600-2297904 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 246-540 |
| Cow position: | chr18:27988522-27988228 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 246-541 |
| Cow position: | chr18:14131732-14131429 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 253 |
| Conread position: | 246-541 |
| Cow position: | chr18:14417316-14417021 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 246-541 |
| Cow position: | chr18:16175280-16175580 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 97 |
| Conread position: | 246-541 |
| Cow position: | chr18:28972549-28972848 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 97 |
| Conread position: | 246-541 |
| Cow position: | chr18:41839479-41839766 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 246-541 |
| Cow position: | chr18:51482208-51481920 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 52, 129 |
| Conread position: | 246-545 |
| Cow position: | chr18:16080010-16079699 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 19, 259 |
| Conread position: | 246-545 |
| Cow position: | chr18:47742841-47742534 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 51, 253 |
| Conread position: | 246-545 |
| Cow position: | chr18:51661679-51661373 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 247-541 |
| Cow position: | chr18:52652247-52651948 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 218 |
| Conread position: | 247-545 |
| Cow position: | chr18:54004834-54005140 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 252 |
| Conread position: | 249-535 |
| Cow position: | chr18:40479729-40479430 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 254 |
| Conread position: | 249-545 |
| Cow position: | chr18:19353698-19353391 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 253 |
| Conread position: | 249-545 |
| Cow position: | chr18:51343021-51342717 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 28 |
| Conread position: | 250-545 |
| Cow position: | chr18:29238231-29237936 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 103 |
| Conread position: | 251-541 |
| Cow position: | chr18:56013911-56013611 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 52, 119 |
| Conread position: | 260-540 |
| Cow position: | chr18:27836985-27837273 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 198 |
| Conread position: | 261-541 |
| Cow position: | chr18:23798970-23798685 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 302-541 |
| Cow position: | chr18:36509624-36509378 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 162 |
| Conread position: | 335-545 |
| Cow position: | chr18:51239535-51239318 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 35, 127 |
| Conread position: | 343-541 |
| Cow position: | chr18:32653458-32653253 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 32, 154 |
| Conread position: | 374-545 |
| Cow position: | chr18:37489721-37489548 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 122 |
Show alignments to all cow chromosomes.