Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 1-105 |
| Cow position: | chr19:22165914-22166023 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 218-409 |
| Cow position: | chr19:376350-376549 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 5 |
| Conread position: | 218-423 |
| Cow position: | chr19:3174185-3173972 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 218-537 |
| Cow position: | chr19:40851077-40851406 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 282 |
| Conread position: | 228-540 |
| Cow position: | chr19:42583276-42583611 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 17, 289 |
| Conread position: | 233-540 |
| Cow position: | chr19:9706799-9707092 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 234-541 |
| Cow position: | chr19:39096499-39096182 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 67, 99 |
| Conread position: | 244-394 |
| Cow position: | chr19:5249394-5249550 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 245-536 |
| Cow position: | chr19:6713385-6713664 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 52, 131 |
| Conread position: | 246-513 |
| Cow position: | chr19:40816170-40816450 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 257 |
| Conread position: | 246-537 |
| Cow position: | chr19:892283-892580 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 97 |
| Conread position: | 246-537 |
| Cow position: | chr19:11521835-11522121 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 246-537 |
| Cow position: | chr19:28580320-28580617 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 212 |
| Conread position: | 246-537 |
| Cow position: | chr19:48860870-48861160 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 51, 94 |
| Conread position: | 246-541 |
| Cow position: | chr19:173598-173279 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 246-541 |
| Cow position: | chr19:438098-438398 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 250 |
| Conread position: | 246-541 |
| Cow position: | chr19:7489693-7489385 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 246-541 |
| Cow position: | chr19:33874768-33874466 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 252 |
| Conread position: | 246-541 |
| Cow position: | chr19:39184199-39184498 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 215 |
| Conread position: | 246-541 |
| Cow position: | chr19:39391851-39391549 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 252 |
| Conread position: | 246-543 |
| Cow position: | chr19:135448-135753 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 148 |
| Conread position: | 246-545 |
| Cow position: | chr19:773942-773634 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 246-545 |
| Cow position: | chr19:7343410-7343103 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 253 |
| Conread position: | 246-545 |
| Cow position: | chr19:32194368-32194050 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 51, 264 |
| Conread position: | 246-545 |
| Cow position: | chr19:50723894-50723588 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 247-544 |
| Cow position: | chr19:28405364-28405670 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 247-545 |
| Cow position: | chr19:3139270-3138966 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 55 |
| Conread position: | 248-545 |
| Cow position: | chr19:28594882-28594587 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 124, 54 |
| Conread position: | 249-530 |
| Cow position: | chr19:256602-256306 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 250-545 |
| Cow position: | chr19:39637-39334 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 47, 246 |
| Conread position: | 251-545 |
| Cow position: | chr19:20106063-20105761 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 207 |
| Conread position: | 260-541 |
| Cow position: | chr19:4386945-4386661 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 206 |
| Conread position: | 262-541 |
| Cow position: | chr19:5730197-5729913 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 236 |
| Conread position: | 263-541 |
| Cow position: | chr19:12774437-12774155 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 266-541 |
| Cow position: | chr19:2273059-2273345 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 195 |
| Conread position: | 287-540 |
| Cow position: | chr19:28367309-28367056 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 332-540 |
| Cow position: | chr19:205240-205022 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 170 |
| Conread position: | 343-541 |
| Cow position: | chr19:33942854-33942647 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 32, 157 |
Show alignments to all cow chromosomes.