Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 1-105 |
| Cow position: | chr20:31431226-31431117 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 12-163 |
| Cow position: | chr20:25039042-25039192 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 12-173 |
| Cow position: | chr20:24340259-24340417 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 211-545 |
| Cow position: | chr20:18314007-18314354 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 293 |
| Conread position: | 222-541 |
| Cow position: | chr20:28162140-28161819 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 225-545 |
| Cow position: | chr20:24615571-24615873 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 74, 17 |
| Conread position: | 233-527 |
| Cow position: | chr20:5791654-5791368 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 139 |
| Conread position: | 244-541 |
| Cow position: | chr20:15293293-15293002 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 244-541 |
| Cow position: | chr20:21395224-21394927 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 246-403 |
| Cow position: | chr20:30429572-30429410 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 246-417 |
| Cow position: | chr20:17660440-17660621 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 246-488 |
| Cow position: | chr20:27338501-27338260 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 246-489 |
| Cow position: | chr20:21915934-21915682 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 246-530 |
| Cow position: | chr20:14869655-14869945 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 47, 206 |
| Conread position: | 246-532 |
| Cow position: | chr20:13678744-13679044 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 204 |
| Conread position: | 246-537 |
| Cow position: | chr20:25849519-25849815 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 219 |
| Conread position: | 246-541 |
| Cow position: | chr20:5536239-5535934 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 223 |
| Conread position: | 246-541 |
| Cow position: | chr20:10854036-10854341 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 214 |
| Conread position: | 246-541 |
| Cow position: | chr20:12569825-12569520 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 255 |
| Conread position: | 246-541 |
| Cow position: | chr20:13764200-13763904 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 246-541 |
| Cow position: | chr20:15096595-15096881 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 246-541 |
| Cow position: | chr20:16178465-16178763 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 57, 249 |
| Conread position: | 246-541 |
| Cow position: | chr20:19356071-19355767 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 255 |
| Conread position: | 246-541 |
| Cow position: | chr20:23468360-23468663 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 219 |
| Conread position: | 246-541 |
| Cow position: | chr20:23800186-23799883 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 246-541 |
| Cow position: | chr20:27870506-27870203 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 219 |
| Conread position: | 246-541 |
| Cow position: | chr20:35125795-35125493 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 79 |
| Conread position: | 246-545 |
| Cow position: | chr20:824073-823754 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 246-545 |
| Cow position: | chr20:15066771-15066473 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 246-545 |
| Cow position: | chr20:19439217-19438911 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 253 |
| Conread position: | 246-545 |
| Cow position: | chr20:30686875-30686565 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 257 |
| Conread position: | 247-537 |
| Cow position: | chr20:9344270-9343973 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 201 |
| Conread position: | 250-541 |
| Cow position: | chr20:8216811-8216513 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 100 |
| Conread position: | 254-482 |
| Cow position: | chr20:9520843-9521075 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 41, 111 |
| Conread position: | 260-540 |
| Cow position: | chr20:13663766-13664045 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 42, 115 |
| Conread position: | 275-541 |
| Cow position: | chr20:12437440-12437710 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 68 |
| Conread position: | 324-545 |
| Cow position: | chr20:10101476-10101710 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 180 |
Show alignments to all cow chromosomes.