Cow genome map
Conread name: | rgul0117_e19.y1 |
Conread position: | 1-176 |
Cow position: | chr21:28768327-28768508 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 130 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 13, 103 |
Conread position: | 12-202 |
Cow position: | chr21:20016074-20015869 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 151 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 14, 91 |
Conread position: | 14-176 |
Cow position: | chr21:41070554-41070719 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 120 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 14-495 |
Cow position: | chr21:30563125-30562643 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 168 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 288, 329 |
Conread position: | 217-541 |
Cow position: | chr21:1688710-1689047 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 225 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 7, 28 |
Conread position: | 225-438 |
Cow position: | chr21:5012271-5012487 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 159 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 117, 17 |
Conread position: | 225-471 |
Cow position: | chr21:49296326-49296087 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 179 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 73, 21 |
Conread position: | 229-541 |
Cow position: | chr21:40270242-40270561 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 27 |
Conread position: | 229-545 |
Cow position: | chr21:42914798-42914475 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 223 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 16, 154 |
Conread position: | 233-541 |
Cow position: | chr21:30501-30191 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 180 |
Conread position: | 233-545 |
Cow position: | chr21:45782912-45782591 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 159 |
Conread position: | 244-488 |
Cow position: | chr21:218441-218194 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 192 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 99, 12 |
Conread position: | 244-530 |
Cow position: | chr21:26849601-26849896 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 217 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 53, 255 |
Conread position: | 244-537 |
Cow position: | chr21:3169807-3169514 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 207 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 10, 36 |
Conread position: | 244-541 |
Cow position: | chr21:2417631-2417330 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 50 |
Conread position: | 244-545 |
Cow position: | chr21:2673586-2673897 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 257 |
Conread position: | 244-545 |
Cow position: | chr21:28256842-28256543 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 225 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 53, 200 |
Conread position: | 244-545 |
Cow position: | chr21:40683028-40683336 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 221 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 95, 213 |
Conread position: | 245-545 |
Cow position: | chr21:4185336-4185014 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 241 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 57, 31 |
Conread position: | 246-397 |
Cow position: | chr21:10568118-10567961 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 246-397 |
Cow position: | chr21:37718494-37718644 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 114 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 89, 128 |
Conread position: | 246-454 |
Cow position: | chr21:4078191-4077985 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 164 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 60, 129 |
Conread position: | 246-534 |
Cow position: | chr21:45786018-45786311 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 197 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 56, 26 |
Conread position: | 246-537 |
Cow position: | chr21:47646744-47646459 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 97 |
Conread position: | 246-540 |
Cow position: | chr21:468271-467983 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 219 |
Conread position: | 246-541 |
Cow position: | chr21:3780185-3779881 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 213 |
Conread position: | 246-541 |
Cow position: | chr21:5839848-5840150 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 252 |
Conread position: | 246-541 |
Cow position: | chr21:27284883-27284566 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 233 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 56, 266 |
Conread position: | 246-541 |
Cow position: | chr21:31514901-31515214 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 261 |
Conread position: | 246-541 |
Cow position: | chr21:35145174-35144871 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 253 |
Conread position: | 246-545 |
Cow position: | chr21:26836311-26836000 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 20 |
Conread position: | 246-545 |
Cow position: | chr21:34822797-34823104 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 219 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 51, 212 |
Conread position: | 246-545 |
Cow position: | chr21:37372653-37372347 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 189 |
Conread position: | 247-541 |
Cow position: | chr21:1193169-1192871 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 181 |
Conread position: | 247-543 |
Cow position: | chr21:4588563-4588882 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 235 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 50, 268 |
Conread position: | 247-543 |
Cow position: | chr21:47942361-47942059 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 249 |
Conread position: | 248-542 |
Cow position: | chr21:33253597-33253293 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 147 |
Conread position: | 249-542 |
Cow position: | chr21:39426473-39426172 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 196 |
Conread position: | 249-545 |
Cow position: | chr21:18817136-18817442 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 55 |
Conread position: | 250-541 |
Cow position: | chr21:2712347-2712078 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 208 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 47, 124 |
Conread position: | 250-545 |
Cow position: | chr21:9893304-9893000 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 226 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 31, 36 |
Conread position: | 253-541 |
Cow position: | chr21:10851492-10851193 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 13 |
Conread position: | 253-541 |
Cow position: | chr21:30598072-30598361 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 160 |
Conread position: | 260-541 |
Cow position: | chr21:26402087-26402374 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 170 |
Conread position: | 260-541 |
Cow position: | chr21:27069563-27069854 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 85 |
Conread position: | 260-545 |
Cow position: | chr21:147327-147039 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 83 |
Conread position: | 269-541 |
Cow position: | chr21:2882346-2882624 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 74 |
Conread position: | 313-545 |
Cow position: | chr21:25782985-25782745 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 170 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 26, 76 |
Conread position: | 331-537 |
Cow position: | chr21:5018442-5018228 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 161 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 44, 11 |
Conread position: | 351-541 |
Cow position: | chr21:10567972-10567784 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 142 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 23, 36 |
Conread position: | 355-545 |
Cow position: | chr21:37046926-37046730 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 138 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 17, 142 |
Conread position: | 388-545 |
Cow position: | chr21:13314024-13313866 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 29, 71 |
Show alignments to all cow chromosomes.