Cow genome map

Conread name: rgul0117_e19.y1

Conread position: 1-176
Cow position: chr21:28768327-28768508 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 103

Conread position: 12-202
Cow position: chr21:20016074-20015869 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 91

Conread position: 14-176
Cow position: chr21:41070554-41070719 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 14-495
Cow position: chr21:30563125-30562643 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 288, 329

Conread position: 217-541
Cow position: chr21:1688710-1689047 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 28

Conread position: 225-438
Cow position: chr21:5012271-5012487 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 17

Conread position: 225-471
Cow position: chr21:49296326-49296087 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 21

Conread position: 229-541
Cow position: chr21:40270242-40270561 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 27

Conread position: 229-545
Cow position: chr21:42914798-42914475 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 154

Conread position: 233-541
Cow position: chr21:30501-30191 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 180

Conread position: 233-545
Cow position: chr21:45782912-45782591 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 159

Conread position: 244-488
Cow position: chr21:218441-218194 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 99, 12

Conread position: 244-530
Cow position: chr21:26849601-26849896 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 53, 255

Conread position: 244-537
Cow position: chr21:3169807-3169514 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 36

Conread position: 244-541
Cow position: chr21:2417631-2417330 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 50

Conread position: 244-545
Cow position: chr21:2673586-2673897 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 257

Conread position: 244-545
Cow position: chr21:28256842-28256543 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 200

Conread position: 244-545
Cow position: chr21:40683028-40683336 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 95, 213

Conread position: 245-545
Cow position: chr21:4185336-4185014 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 31

Conread position: 246-397
Cow position: chr21:10568118-10567961 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 246-397
Cow position: chr21:37718494-37718644 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 128

Conread position: 246-454
Cow position: chr21:4078191-4077985 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 60, 129

Conread position: 246-534
Cow position: chr21:45786018-45786311 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 26

Conread position: 246-537
Cow position: chr21:47646744-47646459 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 97

Conread position: 246-540
Cow position: chr21:468271-467983 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 219

Conread position: 246-541
Cow position: chr21:3780185-3779881 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 213

Conread position: 246-541
Cow position: chr21:5839848-5840150 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 252

Conread position: 246-541
Cow position: chr21:27284883-27284566 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 266

Conread position: 246-541
Cow position: chr21:31514901-31515214 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 261

Conread position: 246-541
Cow position: chr21:35145174-35144871 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 253

Conread position: 246-545
Cow position: chr21:26836311-26836000 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 20

Conread position: 246-545
Cow position: chr21:34822797-34823104 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 212

Conread position: 246-545
Cow position: chr21:37372653-37372347 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 189

Conread position: 247-541
Cow position: chr21:1193169-1192871 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 181

Conread position: 247-543
Cow position: chr21:4588563-4588882 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 50, 268

Conread position: 247-543
Cow position: chr21:47942361-47942059 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 249

Conread position: 248-542
Cow position: chr21:33253597-33253293 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 147

Conread position: 249-542
Cow position: chr21:39426473-39426172 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 196

Conread position: 249-545
Cow position: chr21:18817136-18817442 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 55

Conread position: 250-541
Cow position: chr21:2712347-2712078 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 124

Conread position: 250-545
Cow position: chr21:9893304-9893000 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 31, 36

Conread position: 253-541
Cow position: chr21:10851492-10851193 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 13

Conread position: 253-541
Cow position: chr21:30598072-30598361 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 160

Conread position: 260-541
Cow position: chr21:26402087-26402374 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 170

Conread position: 260-541
Cow position: chr21:27069563-27069854 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 85

Conread position: 260-545
Cow position: chr21:147327-147039 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 83

Conread position: 269-541
Cow position: chr21:2882346-2882624 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 74

Conread position: 313-545
Cow position: chr21:25782985-25782745 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 76

Conread position: 331-537
Cow position: chr21:5018442-5018228 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 11

Conread position: 351-541
Cow position: chr21:10567972-10567784 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 36

Conread position: 355-545
Cow position: chr21:37046926-37046730 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 142

Conread position: 388-545
Cow position: chr21:13314024-13313866 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 71

Show alignments to all cow chromosomes.