Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 1-122 |
| Cow position: | chr22:8121407-8121281 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-176 |
| Cow position: | chr22:18993861-18994045 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 140 |
| Conread position: | 1-176 |
| Cow position: | chr22:27748049-27748231 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 227-545 |
| Cow position: | chr22:40370705-40370388 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 232-517 |
| Cow position: | chr22:34600605-34600315 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 70, 82 |
| Conread position: | 233-370 |
| Cow position: | chr22:15852677-15852534 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 233-541 |
| Cow position: | chr22:6601975-6602267 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 16, 191 |
| Conread position: | 235-545 |
| Cow position: | chr22:1323463-1323146 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 264 |
| Conread position: | 242-540 |
| Cow position: | chr22:37133903-37133594 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 112 |
| Conread position: | 244-487 |
| Cow position: | chr22:45582162-45581920 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 61 |
| Conread position: | 244-541 |
| Cow position: | chr22:12730441-12730742 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 41 |
| Conread position: | 244-541 |
| Cow position: | chr22:44397679-44397387 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 60, 99 |
| Conread position: | 245-530 |
| Cow position: | chr22:36270447-36270169 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 189 |
| Conread position: | 246-473 |
| Cow position: | chr22:44492297-44492062 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 246-505 |
| Cow position: | chr22:325945-326201 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 246-511 |
| Cow position: | chr22:8120836-8121113 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 250 |
| Conread position: | 246-534 |
| Cow position: | chr22:316757-316451 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 246-537 |
| Cow position: | chr22:6332954-6332655 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 219 |
| Conread position: | 246-540 |
| Cow position: | chr22:17327212-17327513 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 252 |
| Conread position: | 246-541 |
| Cow position: | chr22:522151-522453 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 63, 253 |
| Conread position: | 246-541 |
| Cow position: | chr22:1519775-1520082 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 256 |
| Conread position: | 246-541 |
| Cow position: | chr22:3803427-3803129 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 96 |
| Conread position: | 246-541 |
| Cow position: | chr22:18815121-18815439 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 267 |
| Conread position: | 246-541 |
| Cow position: | chr22:21590579-21590279 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 99 |
| Conread position: | 246-541 |
| Cow position: | chr22:31333803-31334094 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 212 |
| Conread position: | 246-541 |
| Cow position: | chr22:34169583-34169280 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 253 |
| Conread position: | 246-541 |
| Cow position: | chr22:36185004-36184700 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 151 |
| Conread position: | 246-541 |
| Cow position: | chr22:36860295-36860594 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 219 |
| Conread position: | 246-541 |
| Cow position: | chr22:37141144-37140841 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 253 |
| Conread position: | 246-541 |
| Cow position: | chr22:37292431-37292724 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 246-541 |
| Cow position: | chr22:39468276-39468579 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 59 |
| Conread position: | 246-541 |
| Cow position: | chr22:42992419-42992117 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 251 |
| Conread position: | 246-541 |
| Cow position: | chr22:44935214-44934911 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 212 |
| Conread position: | 246-543 |
| Cow position: | chr22:35906146-35906450 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 170 |
| Conread position: | 246-544 |
| Cow position: | chr22:10908594-10908898 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 251 |
| Conread position: | 246-545 |
| Cow position: | chr22:538348-538038 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 51, 166 |
| Conread position: | 246-545 |
| Cow position: | chr22:1880046-1879731 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 246-545 |
| Cow position: | chr22:3277115-3277422 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 254 |
| Conread position: | 246-545 |
| Cow position: | chr22:6501893-6502208 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 246-545 |
| Cow position: | chr22:8737098-8737392 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 246-545 |
| Cow position: | chr22:18028530-18028219 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 153 |
| Conread position: | 246-545 |
| Cow position: | chr22:20239597-20239904 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 51, 212 |
| Conread position: | 246-545 |
| Cow position: | chr22:27308532-27308838 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 252 |
| Conread position: | 248-541 |
| Cow position: | chr22:1281477-1281790 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 57 |
| Conread position: | 249-460 |
| Cow position: | chr22:21035148-21035363 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 48, 144 |
| Conread position: | 250-533 |
| Cow position: | chr22:15053951-15053666 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 252-537 |
| Cow position: | chr22:11032989-11032692 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 254-545 |
| Cow position: | chr22:6021901-6021600 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 247 |
| Conread position: | 255-408 |
| Cow position: | chr22:33351914-33351756 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 34 |
| Conread position: | 283-541 |
| Cow position: | chr22:41418116-41418373 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 175 |
| Conread position: | 283-545 |
| Cow position: | chr22:13773742-13773465 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 286-540 |
| Cow position: | chr22:15312746-15313009 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 16, 74 |
| Conread position: | 306-545 |
| Cow position: | chr22:16202112-16201864 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 33, 193 |
| Conread position: | 330-541 |
| Cow position: | chr22:44350503-44350721 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 332-545 |
| Cow position: | chr22:5232134-5232354 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 166 |
| Conread position: | 333-541 |
| Cow position: | chr22:44458213-44457995 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 82 |
| Conread position: | 377-530 |
| Cow position: | chr22:23770860-23770706 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 386-540 |
| Cow position: | chr22:37071983-37072142 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 110 |
| Conread position: | 386-541 |
| Cow position: | chr22:31314444-31314288 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 28, 106 |
Show alignments to all cow chromosomes.