Cow genome map


           Conread name:
           rgul0117_e19.y1
        

               Conread position:
               1-122
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 140
               

               Conread position:
               1-176
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               227-545
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               232-517
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               70, 82
               

               Conread position:
               233-370
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               233-541
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               16, 191
               

               Conread position:
               235-545
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 264
               

               Conread position:
               242-540
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               244-487
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               244-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 41
               

               Conread position:
               244-541
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               60, 99
               

               Conread position:
               245-530
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 189
               

               Conread position:
               246-473
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               246-505
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               246-511
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 250
               

               Conread position:
               246-534
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 219
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 252
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               63, 253
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 256
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 96
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 267
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 99
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 212
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 253
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 151
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 219
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 253
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 43
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 251
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 212
               

               Conread position:
               246-543
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 170
               

               Conread position:
               246-544
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 251
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               51, 166
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 254
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               93, 41
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 153
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 252
               

               Conread position:
               248-541
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               88, 57
               

               Conread position:
               249-460
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               48, 144
               

               Conread position:
               250-533
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               252-537
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               254-545
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               43, 247
               

               Conread position:
               255-408
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               283-541
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 175
               

               Conread position:
               283-545
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               286-540
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               306-545
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               33, 193
               

               Conread position:
               330-541
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               332-545
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 166
               

               Conread position:
               333-541
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               9, 82
               

               Conread position:
               377-530
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               36, 116
               

               Conread position:
               386-540
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 110
               

               Conread position:
               386-541
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 106
               
Show alignments to all cow chromosomes.