Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 1-166 |
| Cow position: | chr23:4829135-4829306 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 142 |
| Conread position: | 1-176 |
| Cow position: | chr23:4547927-4547748 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 162 |
| Conread position: | 228-541 |
| Cow position: | chr23:16497974-16498290 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 130 |
| Conread position: | 233-535 |
| Cow position: | chr23:25682698-25682993 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 233-540 |
| Cow position: | chr23:13512365-13512053 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 122 |
| Conread position: | 244-480 |
| Cow position: | chr23:22942906-22943148 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 121, 55 |
| Conread position: | 244-536 |
| Cow position: | chr23:3879840-3880138 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 244 |
| Conread position: | 244-537 |
| Cow position: | chr23:2794013-2794311 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 99 |
| Conread position: | 246-513 |
| Cow position: | chr23:21243497-21243776 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 246-524 |
| Cow position: | chr23:1957128-1956854 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 246-526 |
| Cow position: | chr23:5739114-5739402 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 246-537 |
| Cow position: | chr23:19490786-19490481 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 182 |
| Conread position: | 246-537 |
| Cow position: | chr23:31648779-31649097 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 51, 271 |
| Conread position: | 246-540 |
| Cow position: | chr23:618229-618523 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 71 |
| Conread position: | 246-541 |
| Cow position: | chr23:2025840-2026140 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 97 |
| Conread position: | 246-541 |
| Cow position: | chr23:2759133-2758829 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 255 |
| Conread position: | 246-541 |
| Cow position: | chr23:2780723-2781025 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 7, 187 |
| Conread position: | 246-541 |
| Cow position: | chr23:4818265-4817962 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 253 |
| Conread position: | 246-541 |
| Cow position: | chr23:11780023-11779725 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 83 |
| Conread position: | 246-541 |
| Cow position: | chr23:14963811-14964105 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 246-541 |
| Cow position: | chr23:15178316-15178014 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 246-541 |
| Cow position: | chr23:15526808-15526510 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 64 |
| Conread position: | 246-541 |
| Cow position: | chr23:27400765-27400449 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 265 |
| Conread position: | 246-541 |
| Cow position: | chr23:28367283-28367591 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 37, 256 |
| Conread position: | 246-545 |
| Cow position: | chr23:1022718-1023039 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 239 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 246-545 |
| Cow position: | chr23:2576653-2576362 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 246-545 |
| Cow position: | chr23:3707368-3707058 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 237 |
| Conread position: | 246-545 |
| Cow position: | chr23:19949348-19949662 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 261 |
| Conread position: | 246-545 |
| Cow position: | chr23:23171744-23171437 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 212 |
| Conread position: | 249-540 |
| Cow position: | chr23:26159470-26159785 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 251-506 |
| Cow position: | chr23:22167909-22167646 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 140 |
| Conread position: | 260-536 |
| Cow position: | chr23:4889915-4889631 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 196 |
| Conread position: | 260-541 |
| Cow position: | chr23:965269-965554 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 45, 69 |
| Conread position: | 261-541 |
| Cow position: | chr23:22146083-22146359 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 38, 216 |
| Conread position: | 264-537 |
| Cow position: | chr23:36030153-36030432 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 168 |
| Conread position: | 269-541 |
| Cow position: | chr23:20154993-20155277 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 32, 99 |
| Conread position: | 279-541 |
| Cow position: | chr23:4639417-4639683 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 316-545 |
| Cow position: | chr23:8287204-8286968 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 29, 185 |
| Conread position: | 324-540 |
| Cow position: | chr23:16614273-16614494 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 331-545 |
| Cow position: | chr23:2312083-2312304 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 8, 126 |
| Conread position: | 337-541 |
| Cow position: | chr23:15218754-15218961 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 378-544 |
| Cow position: | chr23:4511171-4510996 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 125 |
Show alignments to all cow chromosomes.