Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 12-195 |
| Cow position: | chr24:17845030-17844847 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 171 |
| Conread position: | 12-202 |
| Cow position: | chr24:26680391-26680201 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 225-541 |
| Cow position: | chr24:6668473-6668779 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 226-545 |
| Cow position: | chr24:9090704-9091041 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 229-372 |
| Cow position: | chr24:17300553-17300701 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 233-541 |
| Cow position: | chr24:38638877-38638566 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 198 |
| Conread position: | 244-545 |
| Cow position: | chr24:6023775-6024084 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 255 |
| Conread position: | 244-545 |
| Cow position: | chr24:22972423-22972114 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 214 |
| Conread position: | 244-545 |
| Cow position: | chr24:36558435-36558749 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 260 |
| Conread position: | 245-447 |
| Cow position: | chr24:19641007-19640803 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 90, 53 |
| Conread position: | 245-540 |
| Cow position: | chr24:6659168-6659469 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 245-541 |
| Cow position: | chr24:6407364-6407057 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 96 |
| Conread position: | 246-478 |
| Cow position: | chr24:19702826-19702590 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 246-489 |
| Cow position: | chr24:14383305-14383561 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 246-533 |
| Cow position: | chr24:14389205-14389505 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 51, 161 |
| Conread position: | 246-541 |
| Cow position: | chr24:4414205-4414505 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 110 |
| Conread position: | 246-541 |
| Cow position: | chr24:12087537-12087230 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 255 |
| Conread position: | 246-541 |
| Cow position: | chr24:12334428-12334731 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 219 |
| Conread position: | 246-541 |
| Cow position: | chr24:29188621-29188318 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 212 |
| Conread position: | 246-545 |
| Cow position: | chr24:6337717-6337422 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 211 |
| Conread position: | 246-545 |
| Cow position: | chr24:9187414-9187709 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 51, 122 |
| Conread position: | 246-545 |
| Cow position: | chr24:13044313-13044608 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 246-545 |
| Cow position: | chr24:13233586-13233275 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 258 |
| Conread position: | 246-545 |
| Cow position: | chr24:17695651-17695959 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 253 |
| Conread position: | 246-545 |
| Cow position: | chr24:44018836-44018541 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 51, 128 |
| Conread position: | 247-541 |
| Cow position: | chr24:9545382-9545089 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 247-541 |
| Cow position: | chr24:19834724-19834422 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 218 |
| Conread position: | 247-544 |
| Cow position: | chr24:37320264-37320561 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 59, 125 |
| Conread position: | 249-535 |
| Cow position: | chr24:6142409-6142121 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 249-545 |
| Cow position: | chr24:12109378-12109682 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 48, 119 |
| Conread position: | 250-537 |
| Cow position: | chr24:1450745-1450457 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 89, 54 |
| Conread position: | 250-541 |
| Cow position: | chr24:6130151-6129856 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 202 |
| Conread position: | 250-545 |
| Cow position: | chr24:6085387-6085084 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 250 |
| Conread position: | 252-545 |
| Cow position: | chr24:23504540-23504841 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 206 |
| Conread position: | 253-540 |
| Cow position: | chr24:8150966-8151245 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 254-540 |
| Cow position: | chr24:6353463-6353185 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 258-545 |
| Cow position: | chr24:17322030-17321727 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 39, 250 |
| Conread position: | 259-545 |
| Cow position: | chr24:6332381-6332671 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 260-541 |
| Cow position: | chr24:147295-147582 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 237 |
| Conread position: | 261-540 |
| Cow position: | chr24:7089654-7089940 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 42, 167 |
| Conread position: | 290-537 |
| Cow position: | chr24:29408420-29408671 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 162 |
| Conread position: | 326-545 |
| Cow position: | chr24:12205057-12205284 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 175 |
Show alignments to all cow chromosomes.