Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 1-176 |
| Cow position: | chr25:31580366-31580548 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-202 |
| Cow position: | chr25:22272104-22272314 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 14-202 |
| Cow position: | chr25:6257348-6257152 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 210-535 |
| Cow position: | chr25:24216151-24216466 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 188, 8 |
| Conread position: | 222-537 |
| Cow position: | chr25:18251602-18251904 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 223-446 |
| Cow position: | chr25:33575869-33576100 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 225-545 |
| Cow position: | chr25:18305448-18305132 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 74, 17 |
| Conread position: | 233-545 |
| Cow position: | chr25:11931476-11931793 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 244-540 |
| Cow position: | chr25:36636393-36636696 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 245-541 |
| Cow position: | chr25:13782325-13782022 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 246-473 |
| Cow position: | chr25:11041657-11041425 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 51, 210 |
| Conread position: | 246-488 |
| Cow position: | chr25:17655731-17655479 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 246-510 |
| Cow position: | chr25:34506398-34506670 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 212 |
| Conread position: | 246-540 |
| Cow position: | chr25:18273481-18273781 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 246-541 |
| Cow position: | chr25:12941381-12941684 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 254 |
| Conread position: | 246-541 |
| Cow position: | chr25:15365243-15364944 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 193 |
| Conread position: | 246-541 |
| Cow position: | chr25:22148827-22148528 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 246-541 |
| Cow position: | chr25:24658922-24659214 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 212 |
| Conread position: | 246-541 |
| Cow position: | chr25:25507993-25507689 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 254 |
| Conread position: | 246-541 |
| Cow position: | chr25:34345713-34346025 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 262 |
| Conread position: | 246-544 |
| Cow position: | chr25:26928591-26928288 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 164 |
| Conread position: | 246-545 |
| Cow position: | chr25:17588266-17588572 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 252 |
| Conread position: | 246-545 |
| Cow position: | chr25:18177985-18177681 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 57, 28 |
| Conread position: | 246-545 |
| Cow position: | chr25:20774081-20774390 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 60 |
| Conread position: | 247-469 |
| Cow position: | chr25:14957160-14957389 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 250-524 |
| Cow position: | chr25:18212621-18212896 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 260-535 |
| Cow position: | chr25:18888465-18888749 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 239 |
| Conread position: | 260-541 |
| Cow position: | chr25:20630905-20630618 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 133 |
| Conread position: | 260-545 |
| Cow position: | chr25:17559284-17559567 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 317-537 |
| Cow position: | chr25:27524925-27525150 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 144 |
| Conread position: | 325-537 |
| Cow position: | chr25:33259624-33259411 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 335-540 |
| Cow position: | chr25:12757885-12758099 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.