Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 1-203 |
| Cow position: | chr27:14139149-14139359 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 12-109 |
| Cow position: | chr27:7086335-7086236 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 223-545 |
| Cow position: | chr27:28079680-28079373 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 183, 19 |
| Conread position: | 232-438 |
| Cow position: | chr27:15274804-15275017 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 235-472 |
| Cow position: | chr27:6160745-6160984 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 246-494 |
| Cow position: | chr27:23292521-23292277 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 246-508 |
| Cow position: | chr27:25803447-25803708 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 51, 134 |
| Conread position: | 246-540 |
| Cow position: | chr27:3234290-3234597 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 257 |
| Conread position: | 246-541 |
| Cow position: | chr27:1210598-1210298 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 97 |
| Conread position: | 246-541 |
| Cow position: | chr27:9330977-9330675 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 97 |
| Conread position: | 246-541 |
| Cow position: | chr27:9991954-9992257 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 253 |
| Conread position: | 246-541 |
| Cow position: | chr27:13898567-13898264 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 219 |
| Conread position: | 246-541 |
| Cow position: | chr27:14459201-14459509 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 197 |
| Conread position: | 246-541 |
| Cow position: | chr27:15636101-15636404 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 219 |
| Conread position: | 246-542 |
| Cow position: | chr27:8568453-8568154 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 246-545 |
| Cow position: | chr27:1677338-1677632 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 248-400 |
| Cow position: | chr27:4980613-4980458 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 253-402 |
| Cow position: | chr27:26554161-26554314 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 260-541 |
| Cow position: | chr27:26326298-26326016 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 260-541 |
| Cow position: | chr27:27664231-27663941 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 266-540 |
| Cow position: | chr27:27415104-27414822 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 123 |
| Conread position: | 286-543 |
| Cow position: | chr27:27751890-27752171 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 227 |
| Conread position: | 302-545 |
| Cow position: | chr27:11095993-11095743 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 155 |
| Conread position: | 326-545 |
| Cow position: | chr27:30273038-30273265 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 173 |
| Conread position: | 329-541 |
| Cow position: | chr27:15036431-15036648 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 136 |
| Conread position: | 378-541 |
| Cow position: | chr27:23336276-23336103 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 44 |
Show alignments to all cow chromosomes.