Cow genome map


           Conread name:
           rgul0117_e19.y1
        

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               8-166
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               12-176
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               14, 88
               

               Conread position:
               161-540
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 37
               

               Conread position:
               219-454
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 48
               

               Conread position:
               223-541
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 281
               

               Conread position:
               244-537
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 220
               

               Conread position:
               244-541
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 149
               

               Conread position:
               244-541
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 222
               

               Conread position:
               244-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 40
               

               Conread position:
               245-540
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               245-544
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 213
               

               Conread position:
               246-353
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 106
               

               Conread position:
               246-471
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 213
               

               Conread position:
               246-471
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               56, 97
               

               Conread position:
               246-475
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               246-479
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               51, 217
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 97
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 169
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 58
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 97
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 253
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 201
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 77
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 162
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 251
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 255
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 122
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 253
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 219
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 97
               

               Conread position:
               246-544
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               51, 128
               

               Conread position:
               247-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 218
               

               Conread position:
               248-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               248-545
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 72
               

               Conread position:
               249-541
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 111
               

               Conread position:
               249-545
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 209
               

               Conread position:
               250-537
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               55, 152
               

               Conread position:
               250-541
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               116, 156
               

               Conread position:
               250-544
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               251-545
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               17, 125
               

               Conread position:
               254-537
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               260-541
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 239
               

               Conread position:
               272-544
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 85
               

               Conread position:
               275-541
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 68
               

               Conread position:
               283-540
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               25, 215
               

               Conread position:
               296-541
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               17, 170
               

               Conread position:
               296-545
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               300-536
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               320-540
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               329-541
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               330-541
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               45, 12
               
Show alignments to all cow chromosomes.