Cow genome map
Conread name: | rgul0117_e19.y1 |
Conread position: | 1-151 |
Cow position: | chr28:32649222-32649064 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 8-166 |
Cow position: | chr28:4547596-4547442 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 18, 93 |
Conread position: | 12-176 |
Cow position: | chr28:2370624-2370791 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 122 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 14, 88 |
Conread position: | 161-540 |
Cow position: | chr28:21360861-21360474 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 37 |
Conread position: | 219-454 |
Cow position: | chr28:21566778-21566530 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 182 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 26, 48 |
Conread position: | 223-541 |
Cow position: | chr28:8380381-8380050 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 281 |
Conread position: | 244-537 |
Cow position: | chr28:29821289-29820988 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 220 |
Conread position: | 244-541 |
Cow position: | chr28:3190962-3191267 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 149 |
Conread position: | 244-541 |
Cow position: | chr28:26424961-26425267 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 222 |
Conread position: | 244-545 |
Cow position: | chr28:24668902-24668596 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 40 |
Conread position: | 245-540 |
Cow position: | chr28:14194247-14194537 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 198 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 52, 38 |
Conread position: | 245-544 |
Cow position: | chr28:10072565-10072260 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 213 |
Conread position: | 246-353 |
Cow position: | chr28:698536-698428 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 92 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 51, 106 |
Conread position: | 246-471 |
Cow position: | chr28:6778650-6778882 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 163 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 52, 213 |
Conread position: | 246-471 |
Cow position: | chr28:33253597-33253383 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 176 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 56, 97 |
Conread position: | 246-475 |
Cow position: | chr28:2085750-2085513 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 181 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 246-479 |
Cow position: | chr28:22231987-22232225 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 174 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 51, 217 |
Conread position: | 246-537 |
Cow position: | chr28:5567428-5567147 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 212 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 51, 97 |
Conread position: | 246-537 |
Cow position: | chr28:5938775-5938477 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 97 |
Conread position: | 246-537 |
Cow position: | chr28:10496241-10496541 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 169 |
Conread position: | 246-537 |
Cow position: | chr28:12408946-12409242 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 58 |
Conread position: | 246-537 |
Cow position: | chr28:18519160-18519457 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 97 |
Conread position: | 246-540 |
Cow position: | chr28:1506158-1505856 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 253 |
Conread position: | 246-541 |
Cow position: | chr28:783948-783661 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 201 |
Conread position: | 246-541 |
Cow position: | chr28:1166593-1166890 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 35 |
Conread position: | 246-541 |
Cow position: | chr28:7003287-7002984 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 77 |
Conread position: | 246-541 |
Cow position: | chr28:7741733-7741436 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 162 |
Conread position: | 246-541 |
Cow position: | chr28:10470796-10470496 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 251 |
Conread position: | 246-541 |
Cow position: | chr28:12151598-12151293 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 255 |
Conread position: | 246-541 |
Cow position: | chr28:13461267-13460962 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 122 |
Conread position: | 246-541 |
Cow position: | chr28:14704096-14704399 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 253 |
Conread position: | 246-541 |
Cow position: | chr28:15034832-15035128 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 246-541 |
Cow position: | chr28:22259860-22260163 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 219 |
Conread position: | 246-541 |
Cow position: | chr28:32791090-32791387 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 97 |
Conread position: | 246-544 |
Cow position: | chr28:6537973-6538279 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 41 |
Conread position: | 246-545 |
Cow position: | chr28:14751835-14751528 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 219 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 51, 212 |
Conread position: | 246-545 |
Cow position: | chr28:24883694-24883991 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 217 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 51, 128 |
Conread position: | 247-541 |
Cow position: | chr28:17666016-17666318 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 218 |
Conread position: | 248-541 |
Cow position: | chr28:1386112-1386410 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 21 |
Conread position: | 248-545 |
Cow position: | chr28:8719671-8719962 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 72 |
Conread position: | 249-541 |
Cow position: | chr28:5799581-5799286 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 111 |
Conread position: | 249-545 |
Cow position: | chr28:1954642-1954338 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 209 |
Conread position: | 250-537 |
Cow position: | chr28:13373968-13374245 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 215 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 55, 152 |
Conread position: | 250-541 |
Cow position: | chr28:18146451-18146741 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 207 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 116, 156 |
Conread position: | 250-544 |
Cow position: | chr28:5766016-5765738 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 221 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 49, 16 |
Conread position: | 251-545 |
Cow position: | chr28:22041999-22042291 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 216 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 17, 125 |
Conread position: | 254-537 |
Cow position: | chr28:7811718-7811442 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 207 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 27, 12 |
Conread position: | 260-541 |
Cow position: | chr28:5750430-5750719 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 239 |
Conread position: | 272-544 |
Cow position: | chr28:5814622-5814362 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 196 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 25, 85 |
Conread position: | 275-541 |
Cow position: | chr28:1813603-1813875 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 68 |
Conread position: | 283-540 |
Cow position: | chr28:29760675-29760941 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 186 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 25, 215 |
Conread position: | 296-541 |
Cow position: | chr28:10580848-10581102 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 195 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 17, 170 |
Conread position: | 296-545 |
Cow position: | chr28:2987847-2988099 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 189 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 40, 51 |
Conread position: | 300-536 |
Cow position: | chr28:15684467-15684232 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 175 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 117, 33 |
Conread position: | 320-540 |
Cow position: | chr28:27678759-27678539 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 151 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 19, 39 |
Conread position: | 329-541 |
Cow position: | chr28:5113090-5113308 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 171 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 7, 63 |
Conread position: | 330-541 |
Cow position: | chr28:1216947-1217168 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 173 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 45, 12 |
Show alignments to all cow chromosomes.