Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 1-193 |
| Cow position: | chr7:38470472-38470271 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 159 |
| Conread position: | 1-202 |
| Cow position: | chr7:33596972-33597184 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 8-202 |
| Cow position: | chr7:161512-161712 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 150 |
| Conread position: | 12-201 |
| Cow position: | chr7:38469968-38469771 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 208-541 |
| Cow position: | chr7:48635782-48635427 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 305 |
| Conread position: | 217-541 |
| Cow position: | chr7:21126322-21126660 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 288 |
| Conread position: | 225-536 |
| Cow position: | chr7:20304326-20304624 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 225-537 |
| Cow position: | chr7:57563777-57564093 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 17 |
| Conread position: | 225-545 |
| Cow position: | chr7:5663888-5663552 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 74, 17 |
| Conread position: | 225-545 |
| Cow position: | chr7:6647341-6647659 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 226-537 |
| Cow position: | chr7:25136182-25135868 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 81, 33 |
| Conread position: | 227-540 |
| Cow position: | chr7:24807150-24807454 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 229-466 |
| Cow position: | chr7:27605985-27606233 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 229-537 |
| Cow position: | chr7:20533273-20532967 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 20, 226 |
| Conread position: | 229-541 |
| Cow position: | chr7:21986740-21986428 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 233-541 |
| Cow position: | chr7:67429893-67429573 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 270 |
| Conread position: | 233-545 |
| Cow position: | chr7:29368706-29369027 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 244-540 |
| Cow position: | chr7:58994894-58994596 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 223 |
| Conread position: | 244-542 |
| Cow position: | chr7:67676398-67676097 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 38, 44 |
| Conread position: | 245-541 |
| Cow position: | chr7:1609336-1609643 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 57, 69 |
| Conread position: | 246-371 |
| Cow position: | chr7:61578811-61578684 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 246-393 |
| Cow position: | chr7:54603649-54603501 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 51, 133 |
| Conread position: | 246-480 |
| Cow position: | chr7:59138949-59138709 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 50, 211 |
| Conread position: | 246-534 |
| Cow position: | chr7:1452948-1452655 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 56, 104 |
| Conread position: | 246-537 |
| Cow position: | chr7:67495409-67495115 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 178 |
| Conread position: | 246-541 |
| Cow position: | chr7:1371339-1371644 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 254 |
| Conread position: | 246-541 |
| Cow position: | chr7:5308810-5309111 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 246-541 |
| Cow position: | chr7:10430118-10430421 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 212 |
| Conread position: | 246-541 |
| Cow position: | chr7:13532601-13532901 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 121 |
| Conread position: | 246-541 |
| Cow position: | chr7:14138290-14138594 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 254 |
| Conread position: | 246-541 |
| Cow position: | chr7:21233703-21234008 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 256 |
| Conread position: | 246-541 |
| Cow position: | chr7:24878576-24878876 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 189 |
| Conread position: | 246-541 |
| Cow position: | chr7:34487219-34486918 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 188 |
| Conread position: | 246-541 |
| Cow position: | chr7:46900766-46901078 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 256 |
| Conread position: | 246-541 |
| Cow position: | chr7:64239699-64240001 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 106 |
| Conread position: | 246-541 |
| Cow position: | chr7:66906027-66905722 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 254 |
| Conread position: | 246-542 |
| Cow position: | chr7:19990317-19990029 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 246-543 |
| Cow position: | chr7:42871449-42871141 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 256 |
| Conread position: | 246-544 |
| Cow position: | chr7:546149-545842 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 251 |
| Conread position: | 246-545 |
| Cow position: | chr7:3299864-3300158 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 51, 101 |
| Conread position: | 246-545 |
| Cow position: | chr7:6721442-6721142 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 246-545 |
| Cow position: | chr7:14214063-14214367 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 90 |
| Conread position: | 246-545 |
| Cow position: | chr7:20514481-20514778 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 51, 90 |
| Conread position: | 246-545 |
| Cow position: | chr7:25440805-25440501 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 246-545 |
| Cow position: | chr7:33311645-33311952 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 51, 212 |
| Conread position: | 246-545 |
| Cow position: | chr7:33332866-33332558 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 214 |
| Conread position: | 246-545 |
| Cow position: | chr7:52763587-52763276 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 19, 257 |
| Conread position: | 246-545 |
| Cow position: | chr7:59680155-59679845 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 246-545 |
| Cow position: | chr7:63387039-63386726 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 257 |
| Conread position: | 247-471 |
| Cow position: | chr7:57211454-57211237 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 101 |
| Conread position: | 247-541 |
| Cow position: | chr7:3156772-3156471 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 247-541 |
| Cow position: | chr7:45947835-45948142 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 187 |
| Conread position: | 248-540 |
| Cow position: | chr7:68334242-68333947 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 95, 26 |
| Conread position: | 248-545 |
| Cow position: | chr7:20824628-20824333 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 59, 114 |
| Conread position: | 249-545 |
| Cow position: | chr7:6629999-6630303 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 48, 209 |
| Conread position: | 249-545 |
| Cow position: | chr7:27100988-27101297 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 255 |
| Conread position: | 249-545 |
| Cow position: | chr7:51015562-51015263 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 55 |
| Conread position: | 250-364 |
| Cow position: | chr7:996058-995942 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 250-536 |
| Cow position: | chr7:24058749-24058449 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 47, 90 |
| Conread position: | 250-537 |
| Cow position: | chr7:67489999-67489713 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 55 |
| Conread position: | 250-540 |
| Cow position: | chr7:21313271-21312986 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 160, 88 |
| Conread position: | 260-540 |
| Cow position: | chr7:55536635-55536921 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 243 |
| Conread position: | 261-537 |
| Cow position: | chr7:526262-525982 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 7, 90 |
| Conread position: | 262-541 |
| Cow position: | chr7:38398105-38397817 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 237 |
| Conread position: | 262-541 |
| Cow position: | chr7:39793058-39792772 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 236 |
| Conread position: | 262-541 |
| Cow position: | chr7:67800111-67799827 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 268-537 |
| Cow position: | chr7:20784693-20784973 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 270-545 |
| Cow position: | chr7:53407878-53407607 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 285-545 |
| Cow position: | chr7:54643227-54643492 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 296-545 |
| Cow position: | chr7:21930391-21930137 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 43, 192 |
| Conread position: | 310-541 |
| Cow position: | chr7:34150543-34150306 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 315-537 |
| Cow position: | chr7:63556168-63555948 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 97, 24 |
| Conread position: | 317-541 |
| Cow position: | chr7:33405018-33405241 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 317-544 |
| Cow position: | chr7:39097279-39097508 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 321-545 |
| Cow position: | chr7:68481774-68481543 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 114 |
| Conread position: | 325-541 |
| Cow position: | chr7:27787855-27787633 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 17, 171 |
| Conread position: | 329-541 |
| Cow position: | chr7:8144013-8144231 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 168 |
| Conread position: | 339-541 |
| Cow position: | chr7:49829416-49829624 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 374-541 |
| Cow position: | chr7:61578633-61578457 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 378-545 |
| Cow position: | chr7:40320077-40319903 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 121 |
| Conread position: | 396-545 |
| Cow position: | chr7:19269285-19269434 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 95 |
Show alignments to all cow chromosomes.