Cow genome map


           Conread name:
           rgul0117_e19.y1
        

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 159
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               8-202
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 150
               

               Conread position:
               12-201
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               208-541
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 305
               

               Conread position:
               217-541
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 288
               

               Conread position:
               225-536
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               225-537
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 17
               

               Conread position:
               225-545
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               225-545
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               72, 19
               

               Conread position:
               226-537
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               81, 33
               

               Conread position:
               227-540
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 19
               

               Conread position:
               229-466
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               229-537
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               20, 226
               

               Conread position:
               229-541
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 103
               

               Conread position:
               233-541
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 270
               

               Conread position:
               233-545
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               244-540
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 223
               

               Conread position:
               244-542
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               38, 44
               

               Conread position:
               245-541
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               246-371
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               246-393
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               51, 133
               

               Conread position:
               246-480
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               50, 211
               

               Conread position:
               246-534
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               56, 104
               

               Conread position:
               246-537
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 178
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 254
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 20
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 121
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 254
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 256
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 189
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 188
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 256
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 106
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 254
               

               Conread position:
               246-542
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               246-543
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 256
               

               Conread position:
               246-544
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 251
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 101
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 36
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 214
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               19, 257
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 36
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 257
               

               Conread position:
               247-471
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               50, 101
               

               Conread position:
               247-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               247-541
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 187
               

               Conread position:
               248-540
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 26
               

               Conread position:
               248-545
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 114
               

               Conread position:
               249-545
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               48, 209
               

               Conread position:
               249-545
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 255
               

               Conread position:
               249-545
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 55
               

               Conread position:
               250-364
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               250-536
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               47, 90
               

               Conread position:
               250-537
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 55
               

               Conread position:
               250-540
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               160, 88
               

               Conread position:
               260-540
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 243
               

               Conread position:
               261-537
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               7, 90
               

               Conread position:
               262-541
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 237
               

               Conread position:
               262-541
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 236
               

               Conread position:
               262-541
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 24
               

               Conread position:
               268-537
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               270-545
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               27, 102
               

               Conread position:
               285-545
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 130
               

               Conread position:
               296-545
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               43, 192
               

               Conread position:
               310-541
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               315-537
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               97, 24
               

               Conread position:
               317-541
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               317-544
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               321-545
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               53, 114
               

               Conread position:
               325-541
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               17, 171
               

               Conread position:
               329-541
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 168
               

               Conread position:
               339-541
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               374-541
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               378-545
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 121
               

               Conread position:
               396-545
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 95
               
Show alignments to all cow chromosomes.