Cow genome map
| Conread name: | rgul0117_e19.y1 |
| Conread position: | 1-202 |
| Cow position: | chr8:3552215-3552006 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 12-171 |
| Cow position: | chr8:1365657-1365813 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 166-506 |
| Cow position: | chr8:46949292-46948938 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 215-545 |
| Cow position: | chr8:42469181-42468848 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 225-489 |
| Cow position: | chr8:53428004-53427737 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 225-545 |
| Cow position: | chr8:30486869-30487198 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 233-534 |
| Cow position: | chr8:49859262-49859572 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 233-541 |
| Cow position: | chr8:59261423-59261729 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 207 |
| Conread position: | 233-545 |
| Cow position: | chr8:10749862-10749549 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 233-545 |
| Cow position: | chr8:37932601-37932276 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 16, 230 |
| Conread position: | 234-541 |
| Cow position: | chr8:10742163-10742480 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 267 |
| Conread position: | 244-467 |
| Cow position: | chr8:30496066-30496292 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 209 |
| Conread position: | 244-537 |
| Cow position: | chr8:45691518-45691828 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 53, 104 |
| Conread position: | 244-537 |
| Cow position: | chr8:46218256-46218541 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 95, 45 |
| Conread position: | 244-541 |
| Cow position: | chr8:17312522-17312213 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 257 |
| Conread position: | 244-541 |
| Cow position: | chr8:19331207-19330902 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 220 |
| Conread position: | 244-545 |
| Cow position: | chr8:47674338-47674035 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 130 |
| Conread position: | 245-541 |
| Cow position: | chr8:51666326-51666633 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 245-545 |
| Cow position: | chr8:47887381-47887075 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 11, 181 |
| Conread position: | 246-363 |
| Cow position: | chr8:44108207-44108088 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 246-396 |
| Cow position: | chr8:44699690-44699540 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 139 |
| Conread position: | 246-454 |
| Cow position: | chr8:20136083-20136298 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 246-471 |
| Cow position: | chr8:19051940-19051707 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 246-528 |
| Cow position: | chr8:23772133-23771834 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 261 |
| Conread position: | 246-529 |
| Cow position: | chr8:25437816-25437516 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 246-536 |
| Cow position: | chr8:33589870-33589570 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 254 |
| Conread position: | 246-540 |
| Cow position: | chr8:3855535-3855834 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 246-540 |
| Cow position: | chr8:8911972-8911692 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 57, 129 |
| Conread position: | 246-540 |
| Cow position: | chr8:32318060-32318361 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 155 |
| Conread position: | 246-540 |
| Cow position: | chr8:42656496-42656780 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 246-541 |
| Cow position: | chr8:3786129-3785826 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 212 |
| Conread position: | 246-541 |
| Cow position: | chr8:4687889-4687592 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 54 |
| Conread position: | 246-541 |
| Cow position: | chr8:5017672-5017369 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 219 |
| Conread position: | 246-541 |
| Cow position: | chr8:7162388-7162087 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 246-541 |
| Cow position: | chr8:8400622-8400926 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 253 |
| Conread position: | 246-541 |
| Cow position: | chr8:11803314-11803013 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 209 |
| Conread position: | 246-541 |
| Cow position: | chr8:12801898-12801603 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 246-541 |
| Cow position: | chr8:14590408-14590712 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 254 |
| Conread position: | 246-541 |
| Cow position: | chr8:25523891-25523592 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 246-541 |
| Cow position: | chr8:39194726-39195025 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 246-541 |
| Cow position: | chr8:41644185-41644481 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 246-541 |
| Cow position: | chr8:42485408-42485106 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 251 |
| Conread position: | 246-541 |
| Cow position: | chr8:46051671-46051377 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 97 |
| Conread position: | 246-541 |
| Cow position: | chr8:50287436-50287735 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 129 |
| Conread position: | 246-541 |
| Cow position: | chr8:60061892-60061573 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 235 |
| Conread position: | 246-545 |
| Cow position: | chr8:1320531-1320227 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 51, 251 |
| Conread position: | 246-545 |
| Cow position: | chr8:2447706-2447411 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 51, 128 |
| Conread position: | 246-545 |
| Cow position: | chr8:2887239-2886933 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 246-545 |
| Cow position: | chr8:11763421-11763126 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 246-545 |
| Cow position: | chr8:21157300-21157604 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 51, 128 |
| Conread position: | 246-545 |
| Cow position: | chr8:27579887-27579580 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 51, 253 |
| Conread position: | 246-545 |
| Cow position: | chr8:32630545-32630842 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 246-545 |
| Cow position: | chr8:34349163-34348859 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 51, 165 |
| Conread position: | 246-545 |
| Cow position: | chr8:38605719-38606017 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 246-545 |
| Cow position: | chr8:47454107-47454413 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 58, 184 |
| Conread position: | 246-545 |
| Cow position: | chr8:50960110-50960413 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 51, 254 |
| Conread position: | 246-545 |
| Cow position: | chr8:58185099-58185392 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 247-540 |
| Cow position: | chr8:14927392-14927688 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 96 |
| Conread position: | 247-541 |
| Cow position: | chr8:25409220-25408917 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 212 |
| Conread position: | 247-544 |
| Cow position: | chr8:42418940-42419252 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 57, 96 |
| Conread position: | 248-541 |
| Cow position: | chr8:12450514-12450208 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 256 |
| Conread position: | 249-544 |
| Cow position: | chr8:22570820-22571123 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 250 |
| Conread position: | 250-545 |
| Cow position: | chr8:14631179-14631484 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 211 |
| Conread position: | 251-544 |
| Cow position: | chr8:42158509-42158800 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 122, 45 |
| Conread position: | 253-541 |
| Cow position: | chr8:11833217-11832899 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 149 |
| Conread position: | 254-541 |
| Cow position: | chr8:24914848-24915146 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 142 |
| Conread position: | 260-541 |
| Cow position: | chr8:47660842-47661130 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 204 |
| Conread position: | 260-541 |
| Cow position: | chr8:50929638-50929940 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 261-541 |
| Cow position: | chr8:25775195-25775486 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 261-541 |
| Cow position: | chr8:29008115-29007829 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 205 |
| Conread position: | 263-540 |
| Cow position: | chr8:54017077-54017356 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 53 |
| Conread position: | 269-545 |
| Cow position: | chr8:32436616-32436897 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 186 |
| Conread position: | 317-541 |
| Cow position: | chr8:28877681-28877914 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 56, 126 |
| Conread position: | 319-525 |
| Cow position: | chr8:56039963-56039747 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 181 |
| Conread position: | 319-540 |
| Cow position: | chr8:38392059-38391831 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 23, 145 |
| Conread position: | 330-545 |
| Cow position: | chr8:8555741-8555963 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 168 |
| Conread position: | 334-545 |
| Cow position: | chr8:45450174-45449963 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 335-536 |
| Cow position: | chr8:4785481-4785676 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 335-537 |
| Cow position: | chr8:8315057-8315267 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 165 |
| Conread position: | 350-545 |
| Cow position: | chr8:30890929-30891130 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 376-537 |
| Cow position: | chr8:21584587-21584424 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 118 |
| Conread position: | 383-545 |
| Cow position: | chr8:45450652-45450491 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 13 |
Show alignments to all cow chromosomes.