Cow genome map


           Conread name:
           rgul0117_e19.y1
        

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 102
               

               Conread position:
               12-171
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               166-506
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               60, 31
               

               Conread position:
               215-545
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               225-489
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               77, 17
               

               Conread position:
               225-545
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               77, 19
               

               Conread position:
               233-534
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 26
               

               Conread position:
               233-541
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 207
               

               Conread position:
               233-545
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               64, 13
               

               Conread position:
               233-545
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               16, 230
               

               Conread position:
               234-541
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 267
               

               Conread position:
               244-467
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 209
               

               Conread position:
               244-537
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               53, 104
               

               Conread position:
               244-537
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               95, 45
               

               Conread position:
               244-541
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 257
               

               Conread position:
               244-541
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 220
               

               Conread position:
               244-545
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 130
               

               Conread position:
               245-541
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               25, 72
               

               Conread position:
               245-545
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               11, 181
               

               Conread position:
               246-363
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               246-396
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               246-454
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               246-471
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               246-528
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 261
               

               Conread position:
               246-529
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               51, 68
               

               Conread position:
               246-536
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 254
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               57, 129
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 155
               

               Conread position:
               246-540
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               57, 71
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 212
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 54
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 219
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 253
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 209
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 86
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 254
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 251
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 129
               

               Conread position:
               246-541
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 235
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               51, 251
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               51, 128
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 26
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               20, 85
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               51, 128
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               51, 253
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               51, 26
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               51, 165
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 127
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               58, 184
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               51, 254
               

               Conread position:
               246-545
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               247-540
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 96
               

               Conread position:
               247-541
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 212
               

               Conread position:
               247-544
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 96
               

               Conread position:
               248-541
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 256
               

               Conread position:
               249-544
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 250
               

               Conread position:
               250-545
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 211
               

               Conread position:
               251-544
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               122, 45
               

               Conread position:
               253-541
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               44, 149
               

               Conread position:
               254-541
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 142
               

               Conread position:
               260-541
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 204
               

               Conread position:
               260-541
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               42, 135
               

               Conread position:
               261-541
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               261-541
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 205
               

               Conread position:
               263-540
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 53
               

               Conread position:
               269-545
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 186
               

               Conread position:
               317-541
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               56, 126
               

               Conread position:
               319-525
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 181
               

               Conread position:
               319-540
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               23, 145
               

               Conread position:
               330-545
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 168
               

               Conread position:
               334-545
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               335-536
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 71
               

               Conread position:
               335-537
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 165
               

               Conread position:
               350-545
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 106
               

               Conread position:
               376-537
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               37, 118
               

               Conread position:
               383-545
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               23, 13
               
Show alignments to all cow chromosomes.