Cow genome map

Conread name: rgul0117_o20.y1

Conread position: 1-413
Cow position: chr1:4384895-4385321 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 127

Conread position: 1-543
Cow position: chr1:93111063-93110522 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 59

Conread position: 1-571
Cow position: chr1:82338222-82337659 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 132

Conread position: 1-582
Cow position: chr1:54163246-54162667 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 51

Conread position: 2-553
Cow position: chr1:62434219-62433685 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 125

Conread position: 3-564
Cow position: chr1:95765535-95764980 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 63

Conread position: 26-557
Cow position: chr1:56644018-56643498 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 129

Conread position: 31-563
Cow position: chr1:3924212-3923687 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 102

Conread position: 57-554
Cow position: chr1:74947500-74947014 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 341
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 270, 68

Conread position: 59-557
Cow position: chr1:30413182-30413697 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 291
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 137, 182

Conread position: 60-426
Cow position: chr1:25383260-25383636 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 245
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 66, 181

Conread position: 138-571
Cow position: chr1:59910034-59910476 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 302
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 52, 9

Conread position: 144-555
Cow position: chr1:10064287-10063876 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 293
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 10

Conread position: 173-557
Cow position: chr1:42554989-42555373 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 53

Conread position: 174-550
Cow position: chr1:52774797-52774430 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 11

Conread position: 174-551
Cow position: chr1:92642719-92642347 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 262
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 31

Conread position: 174-566
Cow position: chr1:54478045-54478445 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 268
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 10

Conread position: 178-483
Cow position: chr1:31871144-31871462 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 11, 55

Conread position: 181-557
Cow position: chr1:90423356-90422976 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 261
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 150, 15

Conread position: 181-582
Cow position: chr1:55202890-55202492 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 293
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 23, 15

Conread position: 182-433
Cow position: chr1:41696785-41697038 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 44

Conread position: 184-413
Cow position: chr1:20799603-20799845 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 41

Conread position: 187-494
Cow position: chr1:8869931-8869615 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 46

Conread position: 188-413
Cow position: chr1:96478433-96478657 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 142, 8

Conread position: 188-423
Cow position: chr1:5873234-5873002 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 127, 8

Conread position: 188-469
Cow position: chr1:50634670-50634384 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 143, 43

Conread position: 188-485
Cow position: chr1:60120168-60120457 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 27

Conread position: 188-515
Cow position: chr1:6321943-6322270 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 6, 59

Conread position: 188-543
Cow position: chr1:90868699-90868348 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 128, 8

Conread position: 188-548
Cow position: chr1:23623894-23624261 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 8, 187

Conread position: 188-553
Cow position: chr1:39183078-39182733 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 315, 8

Conread position: 188-553
Cow position: chr1:98655965-98655613 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 253
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 8

Conread position: 188-557
Cow position: chr1:7657579-7657207 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 8, 166

Conread position: 188-582
Cow position: chr1:64480241-64479838 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 28

Conread position: 188-582
Cow position: chr1:77867912-77868283 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 44

Conread position: 189-508
Cow position: chr1:31378188-31377881 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 41

Conread position: 189-553
Cow position: chr1:57646417-57646772 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 36

Conread position: 189-561
Cow position: chr1:89349715-89350076 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 253
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 247, 8

Conread position: 189-562
Cow position: chr1:71135889-71136263 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 41

Conread position: 189-563
Cow position: chr1:13056790-13056421 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 251
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 126, 8

Conread position: 190-558
Cow position: chr1:84255494-84255875 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 137, 8

Conread position: 191-448
Cow position: chr1:22728786-22729045 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 136, 40

Conread position: 191-554
Cow position: chr1:97622456-97622117 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 245
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 191-574
Cow position: chr1:52206432-52206804 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 7

Conread position: 195-411
Cow position: chr1:1053331-1053548 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 136, 40

Conread position: 195-414
Cow position: chr1:82861516-82861742 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 131, 182

Conread position: 195-423
Cow position: chr1:4374595-4374370 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 136, 29

Conread position: 195-426
Cow position: chr1:41004624-41004390 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 36

Conread position: 195-435
Cow position: chr1:20204768-20205009 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 37

Conread position: 195-443
Cow position: chr1:666103-666354 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 141, 36

Conread position: 195-452
Cow position: chr1:90864557-90864297 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 132, 36

Conread position: 195-485
Cow position: chr1:20422464-20422175 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 195-541
Cow position: chr1:2075585-2075260 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 282, 36

Conread position: 195-543
Cow position: chr1:3657624-3657273 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 234
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 110, 36

Conread position: 195-543
Cow position: chr1:10778317-10778656 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 235
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 234, 29

Conread position: 195-543
Cow position: chr1:53424931-53425270 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 157, 9

Conread position: 195-543
Cow position: chr1:54258310-54258659 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 239
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 157, 39

Conread position: 195-553
Cow position: chr1:15307777-15308136 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 150, 36

Conread position: 195-553
Cow position: chr1:64099520-64099174 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 29

Conread position: 195-558
Cow position: chr1:8365-8723 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 231
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 157, 36

Conread position: 195-558
Cow position: chr1:95499752-95499388 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 136, 29

Conread position: 195-582
Cow position: chr1:7233059-7233436 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 266
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 93, 36

Conread position: 195-582
Cow position: chr1:92551392-92551009 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 107

Conread position: 196-413
Cow position: chr1:80988090-80988305 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 35

Conread position: 196-437
Cow position: chr1:42968572-42968331 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 110, 20

Conread position: 196-440
Cow position: chr1:70282681-70282923 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 7

Conread position: 196-508
Cow position: chr1:53039955-53039643 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 131, 37

Conread position: 196-523
Cow position: chr1:82884641-82884319 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 131, 39

Conread position: 196-540
Cow position: chr1:29975853-29975510 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 126, 28

Conread position: 196-562
Cow position: chr1:10719742-10719369 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 134, 97

Conread position: 196-566
Cow position: chr1:34856885-34856512 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 250
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 28

Conread position: 196-566
Cow position: chr1:53458449-53458812 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 237
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 229, 109

Conread position: 196-577
Cow position: chr1:71331810-71331413 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 130, 35

Conread position: 196-582
Cow position: chr1:1825523-1825915 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 28

Conread position: 197-405
Cow position: chr1:36613530-36613323 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 48

Conread position: 197-452
Cow position: chr1:634936-635190 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 131, 34

Conread position: 197-522
Cow position: chr1:11853945-11853616 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 215
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 27

Conread position: 197-542
Cow position: chr1:56634843-56635190 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 7

Conread position: 197-582
Cow position: chr1:19440273-19439887 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 34

Conread position: 198-414
Cow position: chr1:91817028-91816811 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 128, 33

Conread position: 198-426
Cow position: chr1:7350284-7350515 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 129, 26

Conread position: 198-433
Cow position: chr1:68818050-68817819 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 133, 42

Conread position: 198-557
Cow position: chr1:41735879-41735513 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 133, 33

Conread position: 200-539
Cow position: chr1:92048583-92048912 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 109, 31

Conread position: 200-553
Cow position: chr1:15037081-15037428 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 113, 30

Conread position: 200-578
Cow position: chr1:71938763-71938380 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 15

Conread position: 203-397
Cow position: chr1:32360393-32360207 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 203-404
Cow position: chr1:31348157-31347965 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 124, 21

Conread position: 203-433
Cow position: chr1:7143098-7142868 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 28

Conread position: 203-439
Cow position: chr1:57900990-57900755 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 128, 31

Conread position: 203-484
Cow position: chr1:55135587-55135865 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 112, 28

Conread position: 203-542
Cow position: chr1:32341456-32341115 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 124, 21

Conread position: 203-553
Cow position: chr1:28567687-28567337 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 27

Conread position: 203-553
Cow position: chr1:86325860-86325502 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 28

Conread position: 203-553
Cow position: chr1:92880578-92880220 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 183

Conread position: 203-561
Cow position: chr1:78791556-78791199 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 242
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 124, 92

Conread position: 203-563
Cow position: chr1:95215435-95215077 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 28

Conread position: 203-571
Cow position: chr1:86020316-86019964 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 69

Conread position: 203-582
Cow position: chr1:29379924-29379556 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 350, 41

Conread position: 204-413
Cow position: chr1:57264234-57264036 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 204-434
Cow position: chr1:78857570-78857340 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 127, 20

Conread position: 204-486
Cow position: chr1:32244647-32244359 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 127, 27

Conread position: 204-539
Cow position: chr1:101852322-101852002 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 225, 27

Conread position: 204-557
Cow position: chr1:70534182-70533832 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 112, 27

Conread position: 204-558
Cow position: chr1:29771977-29771642 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 215, 26

Conread position: 204-558
Cow position: chr1:47233723-47233370 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 226
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 212, 27

Conread position: 204-562
Cow position: chr1:5162301-5161943 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 122, 27

Conread position: 204-576
Cow position: chr1:102313110-102312743 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 68, 27

Conread position: 204-582
Cow position: chr1:86614618-86614994 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 127, 20

Conread position: 206-512
Cow position: chr1:23931825-23931532 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 224, 18

Conread position: 207-391
Cow position: chr1:25856445-25856624 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 207-467
Cow position: chr1:81277446-81277194 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 124, 17

Conread position: 207-504
Cow position: chr1:64973402-64973701 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 115, 86

Conread position: 207-510
Cow position: chr1:25087743-25087445 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 80, 24

Conread position: 207-514
Cow position: chr1:89262596-89262296 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 148, 24

Conread position: 207-522
Cow position: chr1:11914122-11913806 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 17

Conread position: 207-553
Cow position: chr1:22516303-22516648 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 8

Conread position: 207-563
Cow position: chr1:37309749-37309406 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 230
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 145, 13

Conread position: 207-573
Cow position: chr1:32913500-32913867 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 248
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 80

Conread position: 207-580
Cow position: chr1:18224123-18223739 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 17

Conread position: 208-410
Cow position: chr1:30504227-30504428 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 111, 16

Conread position: 208-543
Cow position: chr1:19465818-19466146 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 207, 16

Conread position: 209-402
Cow position: chr1:8919800-8919618 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 209-425
Cow position: chr1:20002479-20002267 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 143, 22

Conread position: 210-535
Cow position: chr1:58882252-58881938 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 21

Conread position: 212-521
Cow position: chr1:28284334-28284647 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 110, 19

Conread position: 212-540
Cow position: chr1:62732335-62732662 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 119, 12

Conread position: 212-570
Cow position: chr1:44506728-44507093 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 103, 21

Conread position: 213-413
Cow position: chr1:70236532-70236328 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 59

Conread position: 213-543
Cow position: chr1:70933622-70933304 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 118, 18

Conread position: 213-582
Cow position: chr1:76859833-76859471 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 253, 112

Conread position: 214-543
Cow position: chr1:76096201-76096531 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 116, 17

Conread position: 215-460
Cow position: chr1:73522381-73522137 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 16

Conread position: 215-532
Cow position: chr1:25886312-25885992 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 9

Conread position: 215-566
Cow position: chr1:55357523-55357179 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 16

Conread position: 220-516
Cow position: chr1:53411142-53410860 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 199, 18

Conread position: 220-557
Cow position: chr1:92010080-92010418 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 185

Conread position: 222-582
Cow position: chr1:34892337-34892696 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 100, 8

Conread position: 223-543
Cow position: chr1:98551483-98551813 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 108, 45

Conread position: 223-582
Cow position: chr1:88304092-88304443 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 237, 79

Conread position: 224-435
Cow position: chr1:51836342-51836552 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 224-564
Cow position: chr1:8243139-8243488 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 275

Conread position: 224-564
Cow position: chr1:64189273-64189614 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 231
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 81

Conread position: 225-461
Cow position: chr1:84602165-84601921 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 199

Conread position: 225-553
Cow position: chr1:29648633-29648303 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 135

Conread position: 227-553
Cow position: chr1:22495318-22495648 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 104, 17

Conread position: 230-404
Cow position: chr1:5061798-5061978 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 230-541
Cow position: chr1:90976307-90975997 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 68

Conread position: 230-553
Cow position: chr1:25119241-25118944 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 231-542
Cow position: chr1:81925041-81924739 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 188, 25

Conread position: 231-553
Cow position: chr1:45573081-45572769 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 188, 71

Conread position: 232-564
Cow position: chr1:26702429-26702094 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 224
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 139

Conread position: 233-552
Cow position: chr1:5320807-5321104 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 183, 62

Conread position: 235-530
Cow position: chr1:64939161-64938853 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 73

Conread position: 235-563
Cow position: chr1:69415936-69415599 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 299

Conread position: 235-578
Cow position: chr1:79250239-79250579 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 78

Conread position: 243-543
Cow position: chr1:75382781-75383070 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 110

Conread position: 244-543
Cow position: chr1:17291853-17291545 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 5, 59

Conread position: 244-543
Cow position: chr1:84015662-84015964 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 217

Conread position: 245-561
Cow position: chr1:58825340-58825651 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 77, 57

Conread position: 246-553
Cow position: chr1:82865021-82865335 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 45

Conread position: 257-562
Cow position: chr1:28678329-28678633 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 178, 76

Conread position: 264-443
Cow position: chr1:33331278-33331100 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 98

Conread position: 264-553
Cow position: chr1:42174778-42174485 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 39

Conread position: 265-563
Cow position: chr1:20581759-20582055 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 7, 132

Conread position: 267-438
Cow position: chr1:89082921-89083094 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 41

Conread position: 267-561
Cow position: chr1:84235517-84235222 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 30

Conread position: 271-519
Cow position: chr1:59808125-59807881 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 68, 24

Conread position: 273-524
Cow position: chr1:68811335-68811093 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 146, 60

Conread position: 291-557
Cow position: chr1:75347454-75347731 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 243

Conread position: 293-582
Cow position: chr1:33085156-33084862 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 33, 131

Conread position: 305-529
Cow position: chr1:29041267-29041492 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 5

Conread position: 308-552
Cow position: chr1:63314679-63314932 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 154

Conread position: 335-554
Cow position: chr1:79115225-79115449 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 14

Conread position: 338-550
Cow position: chr1:34310742-34310955 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 50

Conread position: 343-578
Cow position: chr1:77169240-77169479 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 15

Conread position: 347-571
Cow position: chr1:59613314-59613540 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 82

Conread position: 348-552
Cow position: chr1:86364788-86364992 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 82, 141

Conread position: 350-532
Cow position: chr1:87915059-87914879 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 353-564
Cow position: chr1:59132312-59132103 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 85, 0

Conread position: 356-550
Cow position: chr1:29662169-29661972 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 41

Conread position: 358-553
Cow position: chr1:85409962-85409765 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 27

Conread position: 358-553
Cow position: chr1:88960374-88960574 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 19

Conread position: 425-578
Cow position: chr1:40223061-40222903 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 439-582
Cow position: chr1:70065794-70065940 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 47

Show alignments to all cow chromosomes.