Cow genome map

Conread name: rgul0117_o20.y1

Conread position: 1-552
Cow position:
Alignm length: 572
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 181

Conread position: 2-553
Cow position:
Alignm length: 563
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 155

Conread position: 3-539
Cow position:
Alignm length: 544
Alignm identity: 338
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 182, 41

Conread position: 3-542
Cow position:
Alignm length: 549
Alignm identity: 360
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 50, 32

Conread position: 3-566
Cow position:
Alignm length: 576
Alignm identity: 371
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 328, 87

Conread position: 21-557
Cow position:
Alignm length: 554
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 92

Conread position: 22-554
Cow position:
Alignm length: 540
Alignm identity: 340
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 104, 127

Conread position: 22-578
Cow position:
Alignm length: 583
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 33

Conread position: 31-423
Cow position:
Alignm length: 397
Alignm identity: 264
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 86, 105

Conread position: 31-542
Cow position:
Alignm length: 533
Alignm identity: 349
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 81, 39

Conread position: 66-543
Cow position:
Alignm length: 502
Alignm identity: 333
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 60, 180

Conread position: 157-416
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 20

Conread position: 162-534
Cow position:
Alignm length: 379
Alignm identity: 262
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 70

Conread position: 166-562
Cow position:
Alignm length: 413
Alignm identity: 281
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 165, 11

Conread position: 169-553
Cow position:
Alignm length: 395
Alignm identity: 273
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 35, 15

Conread position: 171-557
Cow position:
Alignm length: 406
Alignm identity: 267
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 39

Conread position: 174-562
Cow position:
Alignm length: 400
Alignm identity: 270
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 22

Conread position: 177-558
Cow position:
Alignm length: 384
Alignm identity: 239
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 55

Conread position: 186-555
Cow position:
Alignm length: 380
Alignm identity: 253
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 145, 5

Conread position: 186-562
Cow position:
Alignm length: 394
Alignm identity: 262
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 10

Conread position: 188-468
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 118, 8

Conread position: 188-487
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 126, 9

Conread position: 188-497
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 37

Conread position: 188-522
Cow position:
Alignm length: 342
Alignm identity: 228
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 8, 54

Conread position: 188-531
Cow position:
Alignm length: 357
Alignm identity: 240
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 8, 26

Conread position: 188-557
Cow position:
Alignm length: 386
Alignm identity: 262
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 143, 8

Conread position: 188-557
Cow position:
Alignm length: 371
Alignm identity: 244
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 289, 43

Conread position: 188-560
Cow position:
Alignm length: 380
Alignm identity: 261
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 16, 45

Conread position: 189-418
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 142, 7

Conread position: 189-448
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 45

Conread position: 189-562
Cow position:
Alignm length: 386
Alignm identity: 261
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 7, 167

Conread position: 189-564
Cow position:
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 43

Conread position: 190-405
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 141, 7

Conread position: 190-414
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 141, 41

Conread position: 190-484
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 235, 6

Conread position: 190-543
Cow position:
Alignm length: 363
Alignm identity: 248
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 6

Conread position: 190-552
Cow position:
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 6

Conread position: 190-562
Cow position:
Alignm length: 379
Alignm identity: 250
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 176, 6

Conread position: 190-564
Cow position:
Alignm length: 379
Alignm identity: 258
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 218, 6

Conread position: 190-566
Cow position:
Alignm length: 385
Alignm identity: 249
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 141, 6

Conread position: 193-431
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 73

Conread position: 194-413
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 100, 30

Conread position: 195-383
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 183, 39

Conread position: 195-414
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 136, 36

Conread position: 195-426
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 136, 36

Conread position: 195-429
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 29

Conread position: 195-431
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 122, 29

Conread position: 195-435
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 136, 29

Conread position: 195-438
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 136, 36

Conread position: 195-450
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 136, 29

Conread position: 195-450
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 93, 36

Conread position: 195-452
Cow position:
Alignm length: 259
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 120, 36

Conread position: 195-461
Cow position:
Alignm length: 274
Alignm identity: 196
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 129, 36

Conread position: 195-543
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 132, 36

Conread position: 195-543
Cow position:
Alignm length: 355
Alignm identity: 234
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 214, 29

Conread position: 195-543
Cow position:
Alignm length: 362
Alignm identity: 239
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 131, 36

Conread position: 195-553
Cow position:
Alignm length: 373
Alignm identity: 258
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 138, 75

Conread position: 195-562
Cow position:
Alignm length: 376
Alignm identity: 246
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 239, 34

Conread position: 195-564
Cow position:
Alignm length: 374
Alignm identity: 248
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 136, 8

Conread position: 195-566
Cow position:
Alignm length: 374
Alignm identity: 243
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 220, 29

Conread position: 195-582
Cow position:
Alignm length: 391
Alignm identity: 269
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 36

Conread position: 196-404
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 135, 106

Conread position: 196-426
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 33

Conread position: 196-430
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 135, 35

Conread position: 196-433
Cow position:
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 35

Conread position: 196-446
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 126, 28

Conread position: 196-542
Cow position:
Alignm length: 363
Alignm identity: 254
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 8, 37

Conread position: 196-562
Cow position:
Alignm length: 380
Alignm identity: 261
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 131, 26

Conread position: 196-564
Cow position:
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 224

Conread position: 197-404
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 35

Conread position: 197-446
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 109, 6

Conread position: 197-452
Cow position:
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 133, 77

Conread position: 197-558
Cow position:
Alignm length: 370
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 134, 34

Conread position: 198-414
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 31

Conread position: 198-425
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 131, 33

Conread position: 198-452
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 127, 33

Conread position: 198-534
Cow position:
Alignm length: 354
Alignm identity: 245
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 133, 33

Conread position: 198-543
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 117, 5

Conread position: 198-557
Cow position:
Alignm length: 361
Alignm identity: 231
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 270, 26

Conread position: 198-564
Cow position:
Alignm length: 371
Alignm identity: 240
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 156, 26

Conread position: 200-433
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 200-543
Cow position:
Alignm length: 351
Alignm identity: 233
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 24

Conread position: 200-564
Cow position:
Alignm length: 372
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 31

Conread position: 202-444
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 203-436
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 97, 27

Conread position: 203-511
Cow position:
Alignm length: 313
Alignm identity: 217
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 149, 112

Conread position: 203-526
Cow position:
Alignm length: 331
Alignm identity: 219
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 126, 21

Conread position: 203-547
Cow position:
Alignm length: 354
Alignm identity: 230
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 128, 28

Conread position: 203-557
Cow position:
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 26

Conread position: 203-558
Cow position:
Alignm length: 356
Alignm identity: 230
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 203-562
Cow position:
Alignm length: 375
Alignm identity: 241
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 21

Conread position: 203-565
Cow position:
Alignm length: 367
Alignm identity: 234
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 16

Conread position: 204-387
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 119, 16

Conread position: 204-469
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 0

Conread position: 205-552
Cow position:
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 19

Conread position: 207-427
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 24

Conread position: 207-446
Cow position:
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 17

Conread position: 207-469
Cow position:
Alignm length: 273
Alignm identity: 192
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 124, 24

Conread position: 207-493
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 124, 24

Conread position: 207-562
Cow position:
Alignm length: 366
Alignm identity: 239
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 92

Conread position: 207-578
Cow position:
Alignm length: 384
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 148

Conread position: 207-582
Cow position:
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 24

Conread position: 208-429
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 16

Conread position: 208-485
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 123, 52

Conread position: 209-543
Cow position:
Alignm length: 349
Alignm identity: 230
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 122, 26

Conread position: 210-437
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 215, 21

Conread position: 210-543
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 121, 24

Conread position: 213-561
Cow position:
Alignm length: 359
Alignm identity: 233
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 147, 18

Conread position: 213-582
Cow position:
Alignm length: 379
Alignm identity: 256
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 240, 87

Conread position: 215-484
Cow position:
Alignm length: 272
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 136

Conread position: 223-553
Cow position:
Alignm length: 344
Alignm identity: 242
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 111, 79

Conread position: 224-520
Cow position:
Alignm length: 302
Alignm identity: 204
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 21

Conread position: 224-571
Cow position:
Alignm length: 356
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 131

Conread position: 225-557
Cow position:
Alignm length: 348
Alignm identity: 238
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 44, 242

Conread position: 226-413
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 227-427
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 104, 153

Conread position: 231-540
Cow position:
Alignm length: 318
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 189, 23

Conread position: 235-511
Cow position:
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 40

Conread position: 244-557
Cow position:
Alignm length: 323
Alignm identity: 216
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 58

Conread position: 244-566
Cow position:
Alignm length: 335
Alignm identity: 218
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 30

Conread position: 245-570
Cow position:
Alignm length: 327
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 52

Conread position: 246-553
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 25

Conread position: 248-546
Cow position:
Alignm length: 310
Alignm identity: 204
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 138, 56

Conread position: 251-582
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 106, 204

Conread position: 252-532
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 143, 52

Conread position: 252-567
Cow position:
Alignm length: 326
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 167, 44

Conread position: 253-469
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 106

Conread position: 253-560
Cow position:
Alignm length: 319
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 125

Conread position: 256-575
Cow position:
Alignm length: 341
Alignm identity: 230
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 75, 9

Conread position: 278-547
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 30

Conread position: 278-557
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 75

Conread position: 296-566
Cow position:
Alignm length: 283
Alignm identity: 187
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 85

Conread position: 319-543
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 341-582
Cow position:
Alignm length: 254
Alignm identity: 191
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 79

Conread position: 342-553
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 36

Conread position: 363-570
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 31

Conread position: 367-582
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 375-582
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 117

Conread position: 395-580
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 160, 35

Show alignments to all cow chromosomes.