Cow genome map

Conread name: rgul0117_o20.y1

Conread position: 1-521
Cow position:
Alignm length: 539
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 126

Conread position: 1-539
Cow position:
Alignm length: 555
Alignm identity: 362
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 308, 126

Conread position: 2-536
Cow position:
Alignm length: 561
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 251

Conread position: 2-582
Cow position:
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 117

Conread position: 8-567
Cow position:
Alignm length: 573
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 21

Conread position: 18-553
Cow position:
Alignm length: 570
Alignm identity: 369
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 97, 176

Conread position: 30-485
Cow position:
Alignm length: 456
Alignm identity: 303
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 94, 0

Conread position: 30-486
Cow position:
Alignm length: 468
Alignm identity: 312
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 80, 28

Conread position: 31-426
Cow position:
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 102

Conread position: 31-525
Cow position:
Alignm length: 519
Alignm identity: 336
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 35, 29

Conread position: 58-466
Cow position:
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 23

Conread position: 130-562
Cow position:
Alignm length: 436
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 56

Conread position: 154-549
Cow position:
Alignm length: 412
Alignm identity: 264
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 101

Conread position: 166-414
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 105, 30

Conread position: 174-404
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 153, 10

Conread position: 179-438
Cow position:
Alignm length: 261
Alignm identity: 174
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 83, 15

Conread position: 183-566
Cow position:
Alignm length: 394
Alignm identity: 260
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 49

Conread position: 184-467
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 47

Conread position: 184-578
Cow position:
Alignm length: 405
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 10

Conread position: 184-582
Cow position:
Alignm length: 408
Alignm identity: 269
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 134, 46

Conread position: 186-411
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 145, 10

Conread position: 186-582
Cow position:
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 45

Conread position: 187-553
Cow position:
Alignm length: 392
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 10

Conread position: 187-562
Cow position:
Alignm length: 377
Alignm identity: 243
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 37

Conread position: 188-413
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 139, 9

Conread position: 188-433
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 8, 37

Conread position: 188-503
Cow position:
Alignm length: 319
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 16

Conread position: 188-505
Cow position:
Alignm length: 326
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 43

Conread position: 188-552
Cow position:
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 8

Conread position: 188-554
Cow position:
Alignm length: 374
Alignm identity: 253
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 8, 44

Conread position: 188-557
Cow position:
Alignm length: 396
Alignm identity: 271
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 40

Conread position: 188-558
Cow position:
Alignm length: 391
Alignm identity: 264
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 143, 10

Conread position: 189-566
Cow position:
Alignm length: 389
Alignm identity: 255
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 142, 7

Conread position: 190-396
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 141, 6

Conread position: 190-413
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 135, 9

Conread position: 190-437
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 190-582
Cow position:
Alignm length: 398
Alignm identity: 273
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 364, 6

Conread position: 191-514
Cow position:
Alignm length: 331
Alignm identity: 223
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 5, 34

Conread position: 193-543
Cow position:
Alignm length: 356
Alignm identity: 237
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 176, 31

Conread position: 194-557
Cow position:
Alignm length: 364
Alignm identity: 237
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 195-413
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 195-413
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 36

Conread position: 195-424
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 133, 29

Conread position: 195-426
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 136, 29

Conread position: 195-429
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 120, 178

Conread position: 195-434
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 132, 36

Conread position: 195-469
Cow position:
Alignm length: 280
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 34

Conread position: 195-469
Cow position:
Alignm length: 279
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 136, 29

Conread position: 195-493
Cow position:
Alignm length: 308
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 154, 0

Conread position: 195-539
Cow position:
Alignm length: 357
Alignm identity: 243
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 41

Conread position: 195-539
Cow position:
Alignm length: 353
Alignm identity: 240
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 136, 43

Conread position: 195-543
Cow position:
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 36

Conread position: 195-543
Cow position:
Alignm length: 354
Alignm identity: 236
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 132, 179

Conread position: 195-553
Cow position:
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 47

Conread position: 195-553
Cow position:
Alignm length: 363
Alignm identity: 251
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 140, 36

Conread position: 195-558
Cow position:
Alignm length: 378
Alignm identity: 249
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 97, 29

Conread position: 195-564
Cow position:
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 29

Conread position: 196-450
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 131, 35

Conread position: 196-452
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 75, 35

Conread position: 196-514
Cow position:
Alignm length: 328
Alignm identity: 215
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 35

Conread position: 196-541
Cow position:
Alignm length: 358
Alignm identity: 236
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 95

Conread position: 196-551
Cow position:
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 28

Conread position: 196-566
Cow position:
Alignm length: 374
Alignm identity: 235
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 180

Conread position: 197-444
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 134, 27

Conread position: 197-486
Cow position:
Alignm length: 290
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 197-539
Cow position:
Alignm length: 348
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 34

Conread position: 198-556
Cow position:
Alignm length: 366
Alignm identity: 248
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 186

Conread position: 198-557
Cow position:
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 33

Conread position: 198-574
Cow position:
Alignm length: 382
Alignm identity: 244
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 133, 5

Conread position: 200-557
Cow position:
Alignm length: 368
Alignm identity: 255
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 133, 24

Conread position: 202-571
Cow position:
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 29

Conread position: 203-495
Cow position:
Alignm length: 304
Alignm identity: 202
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 115, 21

Conread position: 203-520
Cow position:
Alignm length: 332
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 128, 28

Conread position: 203-543
Cow position:
Alignm length: 353
Alignm identity: 237
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 124, 17

Conread position: 203-543
Cow position:
Alignm length: 344
Alignm identity: 238
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 85, 28

Conread position: 203-547
Cow position:
Alignm length: 349
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 157

Conread position: 203-554
Cow position:
Alignm length: 365
Alignm identity: 245
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 113, 28

Conread position: 203-562
Cow position:
Alignm length: 363
Alignm identity: 245
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 131, 40

Conread position: 203-570
Cow position:
Alignm length: 377
Alignm identity: 249
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 21

Conread position: 204-404
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 123, 27

Conread position: 204-486
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 112, 27

Conread position: 204-532
Cow position:
Alignm length: 335
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 84, 27

Conread position: 204-537
Cow position:
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 20

Conread position: 204-551
Cow position:
Alignm length: 355
Alignm identity: 251
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 231, 25

Conread position: 204-552
Cow position:
Alignm length: 360
Alignm identity: 248
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 121, 13

Conread position: 204-554
Cow position:
Alignm length: 354
Alignm identity: 242
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 112, 27

Conread position: 204-562
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 129, 17

Conread position: 204-564
Cow position:
Alignm length: 365
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 20

Conread position: 207-404
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 37

Conread position: 207-423
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 37

Conread position: 207-445
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 120, 206

Conread position: 207-520
Cow position:
Alignm length: 323
Alignm identity: 221
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 212, 56

Conread position: 207-534
Cow position:
Alignm length: 337
Alignm identity: 228
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 81, 208

Conread position: 208-487
Cow position:
Alignm length: 287
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 16

Conread position: 208-570
Cow position:
Alignm length: 374
Alignm identity: 258
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 141, 23

Conread position: 209-486
Cow position:
Alignm length: 281
Alignm identity: 188
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 231, 15

Conread position: 209-566
Cow position:
Alignm length: 364
Alignm identity: 232
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 22

Conread position: 209-578
Cow position:
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 132

Conread position: 212-540
Cow position:
Alignm length: 329
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 212-566
Cow position:
Alignm length: 359
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 26

Conread position: 213-413
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 215-483
Cow position:
Alignm length: 276
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 204, 9

Conread position: 215-566
Cow position:
Alignm length: 356
Alignm identity: 229
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 9

Conread position: 220-437
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 95, 11

Conread position: 220-452
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 105, 11

Conread position: 221-540
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 267, 79

Conread position: 222-458
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 11

Conread position: 223-543
Cow position:
Alignm length: 324
Alignm identity: 210
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 192, 44

Conread position: 224-437
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 107, 154

Conread position: 224-563
Cow position:
Alignm length: 344
Alignm identity: 227
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 60

Conread position: 224-582
Cow position:
Alignm length: 371
Alignm identity: 257
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 30

Conread position: 230-557
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 95, 123

Conread position: 230-557
Cow position:
Alignm length: 341
Alignm identity: 226
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 65

Conread position: 231-434
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 194, 69

Conread position: 231-562
Cow position:
Alignm length: 336
Alignm identity: 225
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 85, 188

Conread position: 235-443
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 236-486
Cow position:
Alignm length: 255
Alignm identity: 170
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 61, 220

Conread position: 238-486
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 93, 57

Conread position: 240-429
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 10

Conread position: 243-474
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 244-555
Cow position:
Alignm length: 327
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 51

Conread position: 247-552
Cow position:
Alignm length: 310
Alignm identity: 216
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 180, 48

Conread position: 250-414
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 37

Conread position: 253-582
Cow position:
Alignm length: 335
Alignm identity: 228
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 183, 55

Conread position: 270-577
Cow position:
Alignm length: 321
Alignm identity: 210
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 100

Conread position: 282-551
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 92

Conread position: 290-582
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 126, 75

Conread position: 296-540
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 72

Conread position: 299-539
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 53

Conread position: 303-582
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 108

Conread position: 330-582
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 106, 9

Conread position: 331-467
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 86, 18

Conread position: 331-485
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 341-582
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 175, 66

Conread position: 342-553
Cow position:
Alignm length: 218
Alignm identity: 156
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 77, 42

Conread position: 370-582
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 52

Conread position: 377-568
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 154

Conread position: 394-582
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 160, 21

Conread position: 431-553
Cow position:
Alignm length: 123
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.