Cow genome map


           Conread name:
           rgul0117_o20.y1
        

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 106
               

               Conread position:
               4-538
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 206
               

               Conread position:
               153-413
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               153-429
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               188-437
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 44
               

               Conread position:
               188-558
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               271
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               98, 8
               

               Conread position:
               188-562
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               8, 113
               

               Conread position:
               194-443
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               122, 39
               

               Conread position:
               195-398
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               102, 36
               

               Conread position:
               195-401
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               195-413
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               195-413
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               82, 36
               

               Conread position:
               195-423
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               136, 20
               

               Conread position:
               195-469
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               75, 29
               

               Conread position:
               195-508
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               136, 11
               

               Conread position:
               195-535
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               127, 29
               

               Conread position:
               195-555
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               195-555
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               195-557
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               232, 8
               

               Conread position:
               196-426
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               196-485
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               131, 35
               

               Conread position:
               196-489
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 41
               

               Conread position:
               196-553
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               8, 199
               

               Conread position:
               196-564
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 35
               

               Conread position:
               196-566
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               135, 17
               

               Conread position:
               199-582
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 35
               

               Conread position:
               201-434
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               203-408
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               203-429
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               139, 28
               

               Conread position:
               203-543
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               203-582
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               128, 28
               

               Conread position:
               204-422
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 38
               

               Conread position:
               204-490
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               204-578
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               268
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               129, 20
               

               Conread position:
               207-503
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               124, 88
               

               Conread position:
               207-543
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               124, 11
               

               Conread position:
               207-557
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               300, 17
               

               Conread position:
               207-582
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               279
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               208-570
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               208, 16
               

               Conread position:
               209-469
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               124, 22
               

               Conread position:
               210-549
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               219-536
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 144
               

               Conread position:
               222-411
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               224-412
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               55, 44
               

               Conread position:
               226-444
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               100, 146
               

               Conread position:
               227-557
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               104, 138
               

               Conread position:
               230-413
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               230-553
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               9, 15
               

               Conread position:
               236-479
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               188, 7
               

               Conread position:
               241-557
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               90, 67
               

               Conread position:
               244-448
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               87, 74
               

               Conread position:
               244-551
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               255-566
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               271-433
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               273-506
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               33, 61
               

               Conread position:
               276-561
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               58, 125
               

               Conread position:
               279-580
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               38, 159
               

               Conread position:
               284-553
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               289-578
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               289-582
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               30, 102
               

               Conread position:
               341-542
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               342-553
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               350-554
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               78, 182
               

               Conread position:
               352-571
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               204, 32
               

               Conread position:
               422-578
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               129, 37
               
Show alignments to all cow chromosomes.