Cow genome map

Conread name: rgul0117_o20.y1

Conread position: 22-412
Cow position:
Alignm length: 401
Alignm identity: 268
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 112, 156

Conread position: 22-557
Cow position:
Alignm length: 553
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 165

Conread position: 39-426
Cow position:
Alignm length: 388
Alignm identity: 245
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 120-430
Cow position:
Alignm length: 311
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 151-575
Cow position:
Alignm length: 438
Alignm identity: 287
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 7, 94

Conread position: 156-489
Cow position:
Alignm length: 349
Alignm identity: 236
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 70

Conread position: 157-411
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 39, 27

Conread position: 163-564
Cow position:
Alignm length: 414
Alignm identity: 274
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 168, 41

Conread position: 176-486
Cow position:
Alignm length: 321
Alignm identity: 211
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 8

Conread position: 177-546
Cow position:
Alignm length: 379
Alignm identity: 257
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 143, 13

Conread position: 184-570
Cow position:
Alignm length: 411
Alignm identity: 280
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 147, 40

Conread position: 185-413
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 143, 11

Conread position: 185-466
Cow position:
Alignm length: 283
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 47

Conread position: 188-414
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 44

Conread position: 188-547
Cow position:
Alignm length: 371
Alignm identity: 243
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 10, 39

Conread position: 189-530
Cow position:
Alignm length: 355
Alignm identity: 235
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 30

Conread position: 189-544
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 142, 7

Conread position: 189-553
Cow position:
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 44

Conread position: 189-566
Cow position:
Alignm length: 391
Alignm identity: 259
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 142, 42

Conread position: 190-553
Cow position:
Alignm length: 376
Alignm identity: 258
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 141, 7

Conread position: 190-553
Cow position:
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 6

Conread position: 190-562
Cow position:
Alignm length: 382
Alignm identity: 256
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 22, 6

Conread position: 190-563
Cow position:
Alignm length: 385
Alignm identity: 250
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 141, 7

Conread position: 190-577
Cow position:
Alignm length: 406
Alignm identity: 276
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 141, 8

Conread position: 191-553
Cow position:
Alignm length: 370
Alignm identity: 250
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 13, 35

Conread position: 191-566
Cow position:
Alignm length: 381
Alignm identity: 257
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 161, 6

Conread position: 192-553
Cow position:
Alignm length: 370
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 39

Conread position: 195-401
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 201, 36

Conread position: 195-408
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 139, 36

Conread position: 195-413
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 120, 29

Conread position: 195-414
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 195-426
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 136, 36

Conread position: 195-430
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 136, 49

Conread position: 195-433
Cow position:
Alignm length: 244
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 139, 29

Conread position: 195-442
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 131, 36

Conread position: 195-467
Cow position:
Alignm length: 280
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 136, 9

Conread position: 195-470
Cow position:
Alignm length: 279
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 157, 29

Conread position: 195-486
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 130, 36

Conread position: 195-504
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 111, 35

Conread position: 195-516
Cow position:
Alignm length: 325
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 136, 21

Conread position: 195-539
Cow position:
Alignm length: 356
Alignm identity: 244
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 131, 29

Conread position: 195-548
Cow position:
Alignm length: 354
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 195-553
Cow position:
Alignm length: 373
Alignm identity: 252
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 121, 36

Conread position: 195-553
Cow position:
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 36

Conread position: 195-558
Cow position:
Alignm length: 375
Alignm identity: 248
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 110, 34

Conread position: 195-560
Cow position:
Alignm length: 382
Alignm identity: 239
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 9, 31

Conread position: 195-562
Cow position:
Alignm length: 371
Alignm identity: 250
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 199, 36

Conread position: 195-563
Cow position:
Alignm length: 373
Alignm identity: 257
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 168, 107

Conread position: 195-566
Cow position:
Alignm length: 378
Alignm identity: 253
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 157, 14

Conread position: 195-581
Cow position:
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 36

Conread position: 195-582
Cow position:
Alignm length: 397
Alignm identity: 272
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 233, 29

Conread position: 195-582
Cow position:
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 34

Conread position: 196-413
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 135, 35

Conread position: 196-414
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 28

Conread position: 196-414
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 156, 28

Conread position: 196-439
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 45

Conread position: 196-543
Cow position:
Alignm length: 351
Alignm identity: 220
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 210, 37

Conread position: 196-557
Cow position:
Alignm length: 362
Alignm identity: 230
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 196-562
Cow position:
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 290

Conread position: 196-582
Cow position:
Alignm length: 401
Alignm identity: 267
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 194, 37

Conread position: 197-426
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 197-434
Cow position:
Alignm length: 238
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 197-578
Cow position:
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 6

Conread position: 197-578
Cow position:
Alignm length: 392
Alignm identity: 271
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 6

Conread position: 203-382
Cow position:
Alignm length: 181
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 149, 28

Conread position: 203-470
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 70, 21

Conread position: 203-485
Cow position:
Alignm length: 288
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 122, 17

Conread position: 203-540
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 28

Conread position: 203-553
Cow position:
Alignm length: 356
Alignm identity: 232
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 113, 28

Conread position: 203-562
Cow position:
Alignm length: 370
Alignm identity: 252
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 113, 30

Conread position: 203-562
Cow position:
Alignm length: 364
Alignm identity: 234
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 113, 28

Conread position: 203-566
Cow position:
Alignm length: 366
Alignm identity: 235
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 149, 28

Conread position: 203-582
Cow position:
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 21

Conread position: 204-514
Cow position:
Alignm length: 320
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 213, 30

Conread position: 204-534
Cow position:
Alignm length: 341
Alignm identity: 225
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 127, 29

Conread position: 204-553
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 127, 40

Conread position: 204-582
Cow position:
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 72

Conread position: 207-435
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 124, 17

Conread position: 207-435
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 24

Conread position: 207-505
Cow position:
Alignm length: 304
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 126, 24

Conread position: 207-534
Cow position:
Alignm length: 335
Alignm identity: 231
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 109, 17

Conread position: 207-566
Cow position:
Alignm length: 366
Alignm identity: 242
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 124, 24

Conread position: 207-566
Cow position:
Alignm length: 371
Alignm identity: 242
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 137, 24

Conread position: 207-582
Cow position:
Alignm length: 381
Alignm identity: 262
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 222, 24

Conread position: 207-582
Cow position:
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 24

Conread position: 208-439
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 21

Conread position: 208-511
Cow position:
Alignm length: 307
Alignm identity: 210
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 211, 23

Conread position: 209-413
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 107, 28

Conread position: 209-543
Cow position:
Alignm length: 339
Alignm identity: 225
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 122, 21

Conread position: 210-413
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 121, 21

Conread position: 212-553
Cow position:
Alignm length: 351
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 12

Conread position: 212-582
Cow position:
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 19

Conread position: 213-487
Cow position:
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 11

Conread position: 215-558
Cow position:
Alignm length: 351
Alignm identity: 237
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 116, 16

Conread position: 217-492
Cow position:
Alignm length: 293
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 17

Conread position: 217-558
Cow position:
Alignm length: 349
Alignm identity: 221
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 189, 67

Conread position: 219-554
Cow position:
Alignm length: 343
Alignm identity: 230
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 15

Conread position: 221-582
Cow position:
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 150

Conread position: 222-561
Cow position:
Alignm length: 350
Alignm identity: 230
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 23

Conread position: 223-429
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 151

Conread position: 223-542
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 108, 151

Conread position: 223-552
Cow position:
Alignm length: 337
Alignm identity: 237
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 196, 66

Conread position: 223-552
Cow position:
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 72

Conread position: 224-543
Cow position:
Alignm length: 322
Alignm identity: 219
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 22

Conread position: 224-557
Cow position:
Alignm length: 343
Alignm identity: 223
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 102, 50

Conread position: 224-564
Cow position:
Alignm length: 352
Alignm identity: 234
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 98, 295

Conread position: 224-578
Cow position:
Alignm length: 384
Alignm identity: 271
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 103, 216

Conread position: 224-582
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 107

Conread position: 225-438
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 226-567
Cow position:
Alignm length: 354
Alignm identity: 234
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 128

Conread position: 230-534
Cow position:
Alignm length: 307
Alignm identity: 210
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 200, 65

Conread position: 230-543
Cow position:
Alignm length: 319
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 87, 57

Conread position: 231-412
Cow position:
Alignm length: 183
Alignm identity: 140
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 146, 89

Conread position: 231-566
Cow position:
Alignm length: 350
Alignm identity: 221
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 149

Conread position: 235-542
Cow position:
Alignm length: 314
Alignm identity: 202
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 113

Conread position: 235-553
Cow position:
Alignm length: 323
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 79, 67

Conread position: 237-404
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 94, 40

Conread position: 245-558
Cow position:
Alignm length: 324
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 29

Conread position: 245-562
Cow position:
Alignm length: 328
Alignm identity: 218
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 77, 50

Conread position: 249-433
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 17

Conread position: 249-557
Cow position:
Alignm length: 312
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 43

Conread position: 258-582
Cow position:
Alignm length: 343
Alignm identity: 247
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 54, 39

Conread position: 266-582
Cow position:
Alignm length: 332
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 182

Conread position: 269-426
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 106

Conread position: 274-540
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 7

Conread position: 278-461
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 76

Conread position: 283-558
Cow position:
Alignm length: 282
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 92

Conread position: 293-552
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 57

Conread position: 295-551
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 32, 94

Conread position: 298-537
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 188

Conread position: 319-521
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 100, 138

Conread position: 330-582
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 80, 25

Conread position: 333-553
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 39

Conread position: 341-582
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 68

Conread position: 357-553
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 16

Conread position: 421-582
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 130, 13

Conread position: 424-553
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Show alignments to all cow chromosomes.