Cow genome map


           Conread name:
           rgul0117_o20.y1
        

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 148
               

               Conread position:
               1-555
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 432
               

               Conread position:
               3-582
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 18
               

               Conread position:
               11-562
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 147
               

               Conread position:
               30-553
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 102
               

               Conread position:
               30-554
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               353
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               32, 45
               

               Conread position:
               31-412
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 102
               

               Conread position:
               57-547
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               330
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               146-582
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 8
               

               Conread position:
               173-553
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               183-440
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               151, 16
               

               Conread position:
               184-582
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 10
               

               Conread position:
               187-430
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               165, 10
               

               Conread position:
               188-423
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               146, 35
               

               Conread position:
               188-468
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               188-563
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               78, 33
               

               Conread position:
               188-564
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 16
               

               Conread position:
               189-428
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               142, 7
               

               Conread position:
               189-487
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               138, 7
               

               Conread position:
               189-582
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               189-582
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               193-534
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               222, 38
               

               Conread position:
               194-424
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 30
               

               Conread position:
               194-541
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               221, 39
               

               Conread position:
               195-404
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               138, 36
               

               Conread position:
               195-414
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               120, 162
               

               Conread position:
               195-423
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               109, 36
               

               Conread position:
               195-437
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               132, 35
               

               Conread position:
               195-524
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               101, 29
               

               Conread position:
               195-530
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 29
               

               Conread position:
               195-557
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               224, 27
               

               Conread position:
               195-564
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               123, 29
               

               Conread position:
               195-566
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               230, 15
               

               Conread position:
               196-404
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               135, 35
               

               Conread position:
               196-511
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               239, 35
               

               Conread position:
               196-561
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               135, 35
               

               Conread position:
               197-429
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               172, 34
               

               Conread position:
               198-505
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               117, 26
               

               Conread position:
               202-562
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               102, 29
               

               Conread position:
               202-566
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               74, 29
               

               Conread position:
               203-464
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               113, 28
               

               Conread position:
               203-469
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               126, 26
               

               Conread position:
               203-550
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               110, 21
               

               Conread position:
               203-562
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               147, 28
               

               Conread position:
               203-566
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               128, 28
               

               Conread position:
               203-566
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               114, 28
               

               Conread position:
               204-429
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               127, 20
               

               Conread position:
               204-582
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 20
               

               Conread position:
               207-459
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               124, 24
               

               Conread position:
               207-508
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               221, 24
               

               Conread position:
               207-552
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               207-553
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 24
               

               Conread position:
               207-555
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 17
               

               Conread position:
               207-557
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               124, 17
               

               Conread position:
               211-564
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               119, 13
               

               Conread position:
               212-429
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               113, 12
               

               Conread position:
               212-548
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 75
               

               Conread position:
               215-411
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               118, 16
               

               Conread position:
               215-438
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               108, 192
               

               Conread position:
               215-567
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               218-413
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               222-582
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 49
               

               Conread position:
               223-433
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               104, 15
               

               Conread position:
               232-426
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               83, 70
               

               Conread position:
               232-461
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               233-564
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               87, 69
               

               Conread position:
               235-437
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               239-558
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               56, 136
               

               Conread position:
               244-520
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               12, 55
               

               Conread position:
               244-562
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               86, 13
               

               Conread position:
               246-535
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               115, 54
               

               Conread position:
               260-428
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 120
               

               Conread position:
               260-557
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 161
               

               Conread position:
               265-524
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               54, 77
               

               Conread position:
               269-412
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               269-553
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               271-557
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               292-539
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               35, 86
               

               Conread position:
               311-554
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               341-520
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               342-582
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               366-582
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 8
               

               Conread position:
               421-574
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               135, 0
               
Show alignments to all cow chromosomes.